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Clc05G12360 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G12360
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBasic blue protein-like
Genome locationClcChr05:10304731..10306594
RNA-Seq ExpressionClc05G12360
SyntenyClc05G12360
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0046658 - anchored component of plasma membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR003245 - Phytocyanin domain
IPR008972 - Cupredoxin
IPR028871 - Blue (type 1) copper protein, binding site
IPR039391 - Phytocyanin
IPR041844 - Plantacyanin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039073.1 basic blue protein-like [Cucumis melo var. makuwa]2.4e-5480.65Show/hide
Query:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK
        MG+GKGS  AITLLLC+FLIQSE+AQA+VYTVGDA GWTFNV +WTK KIFRAGD+LVFKYP M HNV   KNKVAYN CLKP+ SKVYQTG+D+IKLVK
Subjt:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK

Query:  GYNYFICSFPGHCNAGMKIAIKAL
        GYNYFICS+PGHC AGMKIAIKA+
Subjt:  GYNYFICSFPGHCNAGMKIAIKAL

XP_004149963.1 basic blue protein-like [Cucumis sativus]8.9e-5784.68Show/hide
Query:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK
        MGQGKGSA AITLLLC+FLIQSE+AQA+VYTVGDA GWTFNVN+WTK KIFRAGD++VFKYP MAHNV  LKNKVAYN CLKP+GSKVYQTG+D+IKLVK
Subjt:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK

Query:  GYNYFICSFPGHCNAGMKIAIKAL
        GYNYFICS+PGHC AGMKIAIKA+
Subjt:  GYNYFICSFPGHCNAGMKIAIKAL

XP_008456090.1 PREDICTED: basic blue protein-like [Cucumis melo]5.4e-5479.84Show/hide
Query:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK
        MG+GKGS  AITLLLC+FLIQSE+AQA+VYTVGDA GWTFNV +WTK KIFRAGD+LVFKYP + HNV   KNKVAYN CLKP+ SKVYQTG+D+IKLVK
Subjt:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK

Query:  GYNYFICSFPGHCNAGMKIAIKAL
        GYNYFICS+PGHC AGMKIAIKA+
Subjt:  GYNYFICSFPGHCNAGMKIAIKAL

XP_023553464.1 basic blue protein-like [Cucurbita pepo subsp. pepo]2.9e-5282.4Show/hide
Query:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHN-VAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLV
        MGQG GSA+A+TLLLCLFLIQSEMAQARVYTVGDA+GWTFNV SWT+ KIFRAGDVL F YP  AHN VA+L NKVAYN CLK RGSKVYQTG+D+IKLV
Subjt:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHN-VAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLV

Query:  KGYNYFICSFPGHCNAGMKIAIKAL
        KG N+F+CSFPGHC AGMKIAIKAL
Subjt:  KGYNYFICSFPGHCNAGMKIAIKAL

XP_038878139.1 basic blue protein-like [Benincasa hispida]6.1e-5888.89Show/hide
Query:  MGQGKGSAIAITLLLCLFLIQSEM--AQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKL
        MGQGKGSAIAITLLLCLFLIQSEM  A+ARVYTVGDAKGWTFNVNSWTK KIFRAGD+LVFKYP MAHNV +LKNKVAYN CLKPRGSKVYQTG+D+I L
Subjt:  MGQGKGSAIAITLLLCLFLIQSEM--AQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKL

Query:  VKGYNYFICSFPGHCNAGMKIAIKAL
        VKGYNYFIC FPGHC AGMKIAIKAL
Subjt:  VKGYNYFICSFPGHCNAGMKIAIKAL

TrEMBL top hitse value%identityAlignment
A0A0A0L9C5 Phytocyanin domain-containing protein4.3e-5784.68Show/hide
Query:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK
        MGQGKGSA AITLLLC+FLIQSE+AQA+VYTVGDA GWTFNVN+WTK KIFRAGD++VFKYP MAHNV  LKNKVAYN CLKP+GSKVYQTG+D+IKLVK
Subjt:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK

Query:  GYNYFICSFPGHCNAGMKIAIKAL
        GYNYFICS+PGHC AGMKIAIKA+
Subjt:  GYNYFICSFPGHCNAGMKIAIKAL

A0A1S3C2E5 basic blue protein-like2.6e-5479.84Show/hide
Query:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK
        MG+GKGS  AITLLLC+FLIQSE+AQA+VYTVGDA GWTFNV +WTK KIFRAGD+LVFKYP + HNV   KNKVAYN CLKP+ SKVYQTG+D+IKLVK
Subjt:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK

Query:  GYNYFICSFPGHCNAGMKIAIKAL
        GYNYFICS+PGHC AGMKIAIKA+
Subjt:  GYNYFICSFPGHCNAGMKIAIKAL

A0A5A7T7X8 Basic blue protein-like1.2e-5480.65Show/hide
Query:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK
        MG+GKGS  AITLLLC+FLIQSE+AQA+VYTVGDA GWTFNV +WTK KIFRAGD+LVFKYP M HNV   KNKVAYN CLKP+ SKVYQTG+D+IKLVK
Subjt:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK

Query:  GYNYFICSFPGHCNAGMKIAIKAL
        GYNYFICS+PGHC AGMKIAIKA+
Subjt:  GYNYFICSFPGHCNAGMKIAIKAL

A0A6J1E5J4 basic blue protein-like5.1e-5079.2Show/hide
Query:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHN-VAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLV
        MGQG GSA+A+TLLLCLFL+QS MAQARVYTVGDA+GWTFNV  WT+ KIFRA DVL F YP  AHN VA+L NKVAYN CLK RGSKVYQTG+D+IKLV
Subjt:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHN-VAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLV

Query:  KGYNYFICSFPGHCNAGMKIAIKAL
        KG N+F+CSFPGHC AGMKIAIKAL
Subjt:  KGYNYFICSFPGHCNAGMKIAIKAL

A0A6J1JBP6 basic blue protein-like7.8e-5180Show/hide
Query:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVL-KNKVAYNLCLKPRGSKVYQTGRDKIKLV
        MGQG GSA+A+TLL+CLFLIQS MAQARVYTVGDA+GWTFNV SWT+ KIFRAGDVL F YP  AHNV  L  NKVAYN CLK RGSKVYQTG+D+IKLV
Subjt:  MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVL-KNKVAYNLCLKPRGSKVYQTGRDKIKLV

Query:  KGYNYFICSFPGHCNAGMKIAIKAL
        KG N+F+CSFPGHC AGMKIAIKAL
Subjt:  KGYNYFICSFPGHCNAGMKIAIKAL

SwissProt top hitse value%identityAlignment
A0A072U307 Blue copper protein 1b5.1e-1536.89Show/hide
Query:  SAIAITLLLCLFLIQSEMAQARVYTVGDAKGWT--FNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKL-VKGYN
        S + + L + + L+ S    A  Y VGD KGWT  F+   W + K+FR GD LVF Y P  HNV  + N   +  C  P  ++   TG+D I+L  +G  
Subjt:  SAIAITLLLCLFLIQSEMAQARVYTVGDAKGWT--FNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKL-VKGYN

Query:  YFICSFPGHCNA-GMKIAIKAL
        +++C    HC+A  MK+ I  L
Subjt:  YFICSFPGHCNA-GMKIAIKAL

P00303 Basic blue protein2.8e-2959.38Show/hide
Query:  VYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVKGYNYFICSFPGHCNAGMKIAIKAL
        VY VG + GWTFN  SW K K FRAGD+L+F Y P  HNV V+ N+  ++ C  P G+KVY +GRD+IKL KG +YFIC+FPGHC +GMKIA+ AL
Subjt:  VYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVKGYNYFICSFPGHCNAGMKIAIKAL

P60496 Chemocyanin1.4e-2849.21Show/hide
Query:  MGQGKGS---AIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIK
        M QG GS   A+ + ++L   +   E+A++ VYTVGD  GWTF  + W   K FRAGDVLVFKY P  HNV V      Y  C    GS+V+++G D+I 
Subjt:  MGQGKGS---AIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIK

Query:  LVKGYNYFICSFPGHCNAGMKIAIKA
        L +G NYFICS PGHC  G+KIA+ A
Subjt:  LVKGYNYFICSFPGHCNAGMKIAIKA

Q41001 Blue copper protein1.9e-1440.5Show/hide
Query:  AIAITLLLCLFLIQSEMA---QARVYTVGDAKGWTF--NVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK-G
        A +  L+LC  L    MA    A VYTVGD  GW    + ++W   K F  GD LVF Y   AH V  +K    Y  C          TG   I L K G
Subjt:  AIAITLLLCLFLIQSEMA---QARVYTVGDAKGWTF--NVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK-G

Query:  YNYFICSFPGHCNAGMKIAIK
         +YFIC  PGH   GMK++IK
Subjt:  YNYFICSFPGHCNAGMKIAIK

Q8LG89 Basic blue protein4.8e-2948.46Show/hide
Query:  MGQGKGS------AIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRD
        M +G+GS      AI   + + + L+Q++  QA  YTVGD+  WTFN   W K K FRAGDVLVF Y P  HNV V  +  +YN C  P G+K Y +G+D
Subjt:  MGQGKGS------AIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRD

Query:  KIKLVKGYNYFICSFPGHCNAGMKIAIKAL
        +I L KG N+FIC+FP HC + MKIA+ A+
Subjt:  KIKLVKGYNYFICSFPGHCNAGMKIAIKAL

Arabidopsis top hitse value%identityAlignment
AT1G17800.1 early nodulin-like protein 225.6e-1739.13Show/hide
Query:  MGQGKG--SAIAITL-------LLCLFLIQSEMAQAR--VYTVGDAKGW--TFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSK
        M Q  G  S +A+T+       +LCLFL  +     R   Y VG   GW     +++W + K F AGD+L FKY     N+ V+ N+  Y  C    G+ 
Subjt:  MGQGKG--SAIAITL-------LLCLFLIQSEMAQAR--VYTVGDAKGW--TFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSK

Query:  VYQTGRDKIKLVKGYNYFICSF-PGHCNAGMKIAIKAL
         Y +G DKI+L  GYNYFI ++ P  C  G+K+AIKAL
Subjt:  VYQTGRDKIKLVKGYNYFICSF-PGHCNAGMKIAIKAL

AT2G02850.1 plantacyanin3.4e-3048.46Show/hide
Query:  MGQGKGS------AIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRD
        M +G+GS      AI   + + + L+Q++  QA  YTVGD+  WTFN   W K K FRAGDVLVF Y P  HNV V  +  +YN C  P G+K Y +G+D
Subjt:  MGQGKGS------AIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRD

Query:  KIKLVKGYNYFICSFPGHCNAGMKIAIKAL
        +I L KG N+FIC+FP HC + MKIA+ A+
Subjt:  KIKLVKGYNYFICSFPGHCNAGMKIAIKAL

AT2G31050.1 Cupredoxin superfamily protein2.4e-1537.61Show/hide
Query:  TLLLCLFLIQSEMAQARVYTVGDAKGWTF---NVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK-GYNYFIC
        T LL L  +        V+ VGD+ GWT    N  +W     F+ GD LVFKY    H+V  + +   Y +C   +    Y+TG D + L K G  +FIC
Subjt:  TLLLCLFLIQSEMAQARVYTVGDAKGWTF---NVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK-GYNYFIC

Query:  SFPGHCNAGMKIAIKAL
         FPGHC+ G K+ I  L
Subjt:  SFPGHCNAGMKIAIKAL

AT3G60270.1 Cupredoxin superfamily protein4.1e-2044.26Show/hide
Query:  GSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNV--NSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK-GY
        GS  A  LLL L L+      A  + VGD  GWT  V   SW   K FR GD L FKY P +H+VAV+ NK  Y+ C   R ++ +  G  KI L K G 
Subjt:  GSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNV--NSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK-GY

Query:  NYFICSFPGHCNAGMKIAIKAL
         +F+C  PGHC+ GMK+A++ L
Subjt:  NYFICSFPGHCNAGMKIAIKAL

AT5G26330.1 Cupredoxin superfamily protein5.6e-1734.96Show/hide
Query:  SAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVN----SWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK-G
        +AI +  L C+ ++   +++A VY VGD+ GWT   N     W   K F  GD ++F+Y P  HNV  + + + Y  C   +    + TG D I L   G
Subjt:  SAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVN----SWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVK-G

Query:  YNYFICSFPGHCNAGMKIAIKAL
        +++F C  PGHC AG K+ +  L
Subjt:  YNYFICSFPGHCNAGMKIAIKAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCAGGGAAAAGGCAGTGCCATAGCAATCACTTTGTTGCTTTGCCTTTTCCTCATCCAATCTGAAATGGCTCAAGCTAGAGTCTACACTGTTGGAGATGCTAAAGG
ATGGACCTTTAATGTCAATAGTTGGACTAAGAGAAAGATTTTCCGTGCTGGCGATGTACTCGTATTCAAGTATCCTCCAATGGCTCACAATGTGGCGGTGTTGAAGAACA
AAGTGGCTTACAATTTGTGTCTAAAACCAAGAGGCTCAAAAGTTTACCAAACAGGAAGAGACAAAATCAAGCTTGTTAAAGGATACAACTATTTCATCTGCAGCTTCCCT
GGCCATTGCAATGCTGGAATGAAGATTGCCATTAAAGCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTCATCTCATCCTCTTTTCCATATTCTAAAACTCTCCCTTTACCACTAAACACAAAAGAGAGAGTTCCTTAAAGTTTGGTAAAAGAATAATAAAATGGGTCAGGGAAA
AGGCAGTGCCATAGCAATCACTTTGTTGCTTTGCCTTTTCCTCATCCAATCTGAAATGGCTCAAGCTAGAGTCTACACTGTTGGAGATGCTAAAGGATGGACCTTTAATG
TCAATAGTTGGACTAAGAGAAAGATTTTCCGTGCTGGCGATGTACTCGTATTCAAGTATCCTCCAATGGCTCACAATGTGGCGGTGTTGAAGAACAAAGTGGCTTACAAT
TTGTGTCTAAAACCAAGAGGCTCAAAAGTTTACCAAACAGGAAGAGACAAAATCAAGCTTGTTAAAGGATACAACTATTTCATCTGCAGCTTCCCTGGCCATTGCAATGC
TGGAATGAAGATTGCCATTAAAGCTCTTTGAAATATTATAATTATTATAAAAACAAAAAGAGCAATTTAATTAATATATGTTTTAATTAATTAGTTCTTTCTGTTTTATG
TTGGAAAGTTGCTTCTTGTAATGTTGTTTTTGTTTTAATTTTCATATCATTTCTCTAAGTTCTGAGATTAGAAGAAGATCATATTATTGTACTAATTAAATGTGGCTACT
TGTATGGAGGAGTTGAAAAACAATATGGCTTCTGTTATTAATAATAAGTAAAACTAAGAAAATATTAAATAATGGAATTTTTTTA
Protein sequenceShow/hide protein sequence
MGQGKGSAIAITLLLCLFLIQSEMAQARVYTVGDAKGWTFNVNSWTKRKIFRAGDVLVFKYPPMAHNVAVLKNKVAYNLCLKPRGSKVYQTGRDKIKLVKGYNYFICSFP
GHCNAGMKIAIKAL