; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G12450 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G12450
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionneurofilament medium polypeptide-like
Genome locationClcChr05:10416250..10417896
RNA-Seq ExpressionClc05G12450
SyntenyClc05G12450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039110.1 putative serine/threonine-protein kinase kinX [Cucumis melo var. makuwa]4.1e-3459.18Show/hide
Query:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE
        MGGCASKPKT  EKE TPLPV    E+ +   +P    KE KVEN E++SD Q+DEKKVD  EKKVEED QPLSLGCLLIQDKKEVEIPTETKK EPKEE
Subjt:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE

Query:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQKPIAVVDEPQKP
        VKVEAAKPI+AAP A  +VA   AEPQK  A V AA+PQK  AVV  AEPQK       EP+        + +K    V++  +K    VDE   P
Subjt:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQKPIAVVDEPQKP

TYK25973.1 putative serine/threonine-protein kinase kinX [Cucumis melo var. makuwa]6.1e-3859.45Show/hide
Query:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE
        MGGCASKPKT  EKE TPLPV    E+ +   +P    KE KVEN E++SD Q+DEKKVD  EKKVEED QPLSLGCLLIQDKKEVEIPTETKK EPKEE
Subjt:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE

Query:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVV-EAEPQNPIAIV-EAEAQKPIAVVEAEPQKPIAVVDEPQKPIA
        VKVEAAKPI+AAP A  +VA   AEPQK  A V AA+PQK  AVV  AEPQK  AV+  AEPQ   A+V  AE QK       EP+K     D  +  + 
Subjt:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVV-EAEPQNPIAIV-EAEAQKPIAVVEAEPQKPIAVVDEPQKPIA

Query:  VVDELQKPIAVVEPAAP
        V    +K   V E A+P
Subjt:  VVDELQKPIAVVEPAAP

XP_016901902.1 PREDICTED: probable serine/threonine-protein kinase kinX [Cucumis melo]4.1e-3459.18Show/hide
Query:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE
        MGGCASKPKT  EKE TPLPV    E+ +   +P    KE KVEN E++SD Q+DEKKVD  EKKVEED QPLSLGCLLIQDKKEVEIPTETKK EPKEE
Subjt:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE

Query:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQKPIAVVDEPQKP
        VKVEAAKPI+AAP A  +VA   AEPQK  A V AA+PQK  AVV  AEPQK       EP+        + +K    V++  +K    VDE   P
Subjt:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQKPIAVVDEPQKP

XP_031737883.1 histone H1-II [Cucumis sativus]2.8e-5157.55Show/hide
Query:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVEN-EERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKKEPKEE
        MGGCASKPKT  EKE TPLP   VEE ++   I  +L KE K EN  E++SD Q+ EKK+D  EKKVEED QPLSLGCLLIQDKKEVEIPTETKKE  +E
Subjt:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVEN-EERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKKEPKEE

Query:  VKVEAAKPIDAAPAAVVVAPAMAEPQKPIAEVAAAKPQKPIAVVE-AEPQKPIAVV-EAEPQNPIAIV-EAEAQKPIAVV-EAEPQKPIAVV--DEPQK-
        VKVEAAKP +AAP A +VAP  AEPQK  A V AA+PQK  AVV+ AEPQKP AVV  AEPQ   A+V  AE QKP  VV  AEPQKP  VV   EPQ  
Subjt:  VKVEAAKPIDAAPAAVVVAPAMAEPQKPIAEVAAAKPQKPIAVVE-AEPQKPIAVV-EAEPQNPIAIV-EAEAQKPIAVV-EAEPQKPIAVV--DEPQK-

Query:  -PIAVVDELQKPIAVVEPAAPQKPIAVVEPAEPQKPIAVVLRLAEPQKPLP-VAVAEPQKPI-VLPVAEPNKPTVEVAASPKGIEVEKKTTMEAPSLEKK
         P       QK    V  A PQK   VV  AEPQK   VV   AEPQK  P VA AEPQK   V+  AEP K T  VAA+    E +K T + A +  +K
Subjt:  -PIAVVDELQKPIAVVEPAAPQKPIAVVEPAEPQKPIAVVLRLAEPQKPLP-VAVAEPQKPI-VLPVAEPNKPTVEVAASPKGIEVEKKTTMEAPSLEKK

Query:  TT---ATTEPSPAVAVAA
         T   A  EP  A AV A
Subjt:  TT---ATTEPSPAVAVAA

XP_038875505.1 fruit protein pKIWI501-like [Benincasa hispida]3.8e-4060.19Show/hide
Query:  MGGCASKPKTITEKEATPLPVPVVE-EKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKV-EEDGQPLSLGCLLIQDKKEVEIPTETKK-EPK
        MGGCASKPKT TEKE TPLPVPVV+  KE TMAIP++ EKEV+VE EE+KSD Q+D KKVD+GEKKV EED QPLSLGCLLIQDK+EVEIP E KK EPK
Subjt:  MGGCASKPKTITEKEATPLPVPVVE-EKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKV-EEDGQPLSLGCLLIQDKKEVEIPTETKK-EPK

Query:  EEVKVEAAKPIDAAPAAV------VVAPAMAEPQKPIAEVAAAKPQKPIAVVEAEPQK-PIAVVEAEPQNPIAIVEAEAQKPI-----AVVEAEPQKPIA
        EEVK EAAKP +AAPAAV      +V  A+ EPQK  AEVAA +PQK   VVEAEP+K  +    A P+ PI     E +K         VEA P+    
Subjt:  EEVKVEAAKPIDAAPAAV------VVAPAMAEPQKPIAEVAAAKPQKPIAVVEAEPQK-PIAVVEAEPQNPIAIVEAEAQKPI-----AVVEAEPQKPIA

Query:  VVDEPQKPIAVVDELQ
         V+ P   +AV  E Q
Subjt:  VVDEPQKPIAVVDELQ

TrEMBL top hitse value%identityAlignment
A0A0A0L739 Uncharacterized protein4.8e-4152.38Show/hide
Query:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVEN-EERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKKEPKEE
        MGGCASKPKT  EKE TPLP   VEE ++   I  +L KE K EN  E++SD Q+ EKK+D  EKKVEED QPLSLGCLLIQDKKEVEIPTETKKE  +E
Subjt:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVEN-EERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKKEPKEE

Query:  VKVEAAKPIDAAPAAVVVAPAMAEPQKPIAEVAAAKPQKPIAVVEAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQK--PIAVVDEPQKPIAVV
        VKVEAAKP +AAP A +VAP  AEPQK  A V AA+PQK  AVV+A          AEPQ P A+V A          AEPQK  P+    EPQK   V 
Subjt:  VKVEAAKPIDAAPAAVVVAPAMAEPQKPIAEVAAAKPQKPIAVVEAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQK--PIAVVDEPQKPIAVV

Query:  DELQKPIAVVEPAAPQKPIAVVEPAEPQKPIAVVLRLAEPQKPLPVA-VAEPQKPIVLPVAEPNKPTVEVAASPKGIEVEKKTTMEAPSLEKKT
                 V  A PQK    V  AEPQK   VV   AEPQK  PV   AEP+K       E  K  VEV +      VEK   +EA S+   T
Subjt:  DELQKPIAVVEPAAPQKPIAVVEPAEPQKPIAVVLRLAEPQKPLPVA-VAEPQKPIVLPVAEPNKPTVEVAASPKGIEVEKKTTMEAPSLEKKT

A0A1S4E0Y5 probable serine/threonine-protein kinase kinX2.0e-3459.18Show/hide
Query:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE
        MGGCASKPKT  EKE TPLPV    E+ +   +P    KE KVEN E++SD Q+DEKKVD  EKKVEED QPLSLGCLLIQDKKEVEIPTETKK EPKEE
Subjt:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE

Query:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQKPIAVVDEPQKP
        VKVEAAKPI+AAP A  +VA   AEPQK  A V AA+PQK  AVV  AEPQK       EP+        + +K    V++  +K    VDE   P
Subjt:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQKPIAVVDEPQKP

A0A5A7T780 Putative serine/threonine-protein kinase kinX2.0e-3459.18Show/hide
Query:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE
        MGGCASKPKT  EKE TPLPV    E+ +   +P    KE KVEN E++SD Q+DEKKVD  EKKVEED QPLSLGCLLIQDKKEVEIPTETKK EPKEE
Subjt:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE

Query:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQKPIAVVDEPQKP
        VKVEAAKPI+AAP A  +VA   AEPQK  A V AA+PQK  AVV  AEPQK       EP+        + +K    V++  +K    VDE   P
Subjt:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQKPIAVVDEPQKP

A0A5D3DQN9 Putative serine/threonine-protein kinase kinX2.9e-3859.45Show/hide
Query:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE
        MGGCASKPKT  EKE TPLPV    E+ +   +P    KE KVEN E++SD Q+DEKKVD  EKKVEED QPLSLGCLLIQDKKEVEIPTETKK EPKEE
Subjt:  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKK-EPKEE

Query:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVV-EAEPQNPIAIV-EAEAQKPIAVVEAEPQKPIAVVDEPQKPIA
        VKVEAAKPI+AAP A  +VA   AEPQK  A V AA+PQK  AVV  AEPQK  AV+  AEPQ   A+V  AE QK       EP+K     D  +  + 
Subjt:  VKVEAAKPIDAAPAAV-VVAPAMAEPQKPIAEVAAAKPQKPIAVV-EAEPQKPIAVV-EAEPQNPIAIV-EAEAQKPIAVVEAEPQKPIAVVDEPQKPIA

Query:  VVDELQKPIAVVEPAAP
        V    +K   V E A+P
Subjt:  VVDELQKPIAVVEPAAP

A0A6J1D7V2 neurofilament medium polypeptide-like9.8e-1843.98Show/hide
Query:  MGGCASKPKTITEKEATPLPVPVVEEKE-------RTMAIPTLLEKEVK-VENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQD---------K
        MGGCASKPKT ++  A P+P P + E E        TMA  +++EK+V+ V N+E+KSD ++DEKKVDEGEKKVEE  Q  SLG LL++          K
Subjt:  MGGCASKPKTITEKEATPLPVPVVEEKE-------RTMAIPTLLEKEVK-VENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQD---------K

Query:  KEVEIPTETKKEPKEEVKVEAAKPIDAAP--AAVVVAPAMAEPQKPIAEVAAAKPQKPIAVVEAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQ
        KEVE+P  T  EPK+E KVEA K ++  P  AA   AP + EP+K     A A PQK   V      K I  VEA P  P  I   EA        A PQ
Subjt:  KEVEIPTETKKEPKEEVKVEAAKPIDAAP--AAVVVAPAMAEPQKPIAEVAAAKPQKPIAVVEAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQ

Query:  KPIAVVDEPQKPIAVV
        K   +    + P+A V
Subjt:  KPIAVVDEPQKPIAVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGTTGTGCTAGCAAGCCAAAGACAATCACTGAGAAAGAAGCCACCCCATTGCCTGTCCCCGTCGTCGAAGAGAAGGAGAGGACAATGGCGATACCAACT
CTCTTGGAGAAGGAAGTGAAGGTCGAAAATGAAGAAAGAAAGAGTGATTATCAAATTGATGAGAAGAAGGTTGACGAGGGAGAAAAGAAGGTTGAGGAGGATGGC
CAACCGCTCTCTCTTGGATGTTTGCTCATTCAGGACAAAAAAGAAGTAGAAATTCCAACCGAGACCAAAAAAGAGCCCAAAGAAGAAGTGAAGGTTGAGGCAGCG
AAACCAATAGATGCAGCTCCAGCAGCTGTCGTCGTTGCACCGGCGATGGCTGAACCCCAAAAACCCATCGCCGAGGTAGCAGCGGCTAAACCCCAAAAACCCATC
GCCGTCGTCGAGGCTGAGCCTCAAAAACCCATCGCCGTCGTCGAGGCTGAGCCTCAAAATCCCATCGCCATCGTCGAGGCTGAGGCCCAAAAACCCATCGCCGTC
GTTGAGGCTGAGCCCCAAAAACCCATCGCCGTCGTCGATGAGCCCCAAAAACCCATCGCCGTCGTCGATGAGCTCCAAAAACCCATCGCCGTCGTCGAGCCAGCT
GCGCCCCAAAAACCCATCGCCGTCGTCGAGCCAGCTGAACCCCAAAAACCCATCGCCGTCGTCCTGCGGCTAGCTGAACCCCAAAAACCCTTGCCGGTAGCTGTA
GCTGAACCCCAAAAACCCATCGTCTTGCCGGTAGCTGAACCCAATAAACCCACCGTCGAGGTAGCGGCATCCCCAAAAGGCATCGAAGTGGAGAAGAAAACCACC
ATGGAAGCACCGTCATTGGAGAAGAAAACAACTGCAACCACCGAACCATCACCAGCGGTGGCAGTGGCGGCAGTGACAACAGAAAAGCAATGA
mRNA sequenceShow/hide mRNA sequence
CTTCAACTTGCTCTCTTTTCCTTTCTCTTCTCTAAAGCACTTCTGATTCCTTTGAATAAGAAGAGAAAGAAGTACTTTGGTCTTCTTTCTCTCAAACCCAATATC
TCTCTCTCTTTTTTTTTATAACTTCTAACATCTTTAATTTATAAAACTCTTTCTCTCTCATATTTTCAACATGGGTGGTTGTGCTAGCAAGCCAAAGACAATCAC
TGAGAAAGAAGCCACCCCATTGCCTGTCCCCGTCGTCGAAGAGAAGGAGAGGACAATGGCGATACCAACTCTCTTGGAGAAGGAAGTGAAGGTCGAAAATGAAGA
AAGAAAGAGTGATTATCAAATTGATGAGAAGAAGGTTGACGAGGGAGAAAAGAAGGTTGAGGAGGATGGCCAACCGCTCTCTCTTGGATGTTTGCTCATTCAGGA
CAAAAAAGAAGTAGAAATTCCAACCGAGACCAAAAAAGAGCCCAAAGAAGAAGTGAAGGTTGAGGCAGCGAAACCAATAGATGCAGCTCCAGCAGCTGTCGTCGT
TGCACCGGCGATGGCTGAACCCCAAAAACCCATCGCCGAGGTAGCAGCGGCTAAACCCCAAAAACCCATCGCCGTCGTCGAGGCTGAGCCTCAAAAACCCATCGC
CGTCGTCGAGGCTGAGCCTCAAAATCCCATCGCCATCGTCGAGGCTGAGGCCCAAAAACCCATCGCCGTCGTTGAGGCTGAGCCCCAAAAACCCATCGCCGTCGT
CGATGAGCCCCAAAAACCCATCGCCGTCGTCGATGAGCTCCAAAAACCCATCGCCGTCGTCGAGCCAGCTGCGCCCCAAAAACCCATCGCCGTCGTCGAGCCAGC
TGAACCCCAAAAACCCATCGCCGTCGTCCTGCGGCTAGCTGAACCCCAAAAACCCTTGCCGGTAGCTGTAGCTGAACCCCAAAAACCCATCGTCTTGCCGGTAGC
TGAACCCAATAAACCCACCGTCGAGGTAGCGGCATCCCCAAAAGGCATCGAAGTGGAGAAGAAAACCACCATGGAAGCACCGTCATTGGAGAAGAAAACAACTGC
AACCACCGAACCATCACCAGCGGTGGCAGTGGCGGCAGTGACAACAGAAAAGCAATGATTTTTTTATTGTTTTTTTTTTTTTGGAAGAAAAGACGCTGCAGAAAT
TTGATGGAACTAGACAGAACAGAAGATTTGAAGAAGAAGAAAAATGGCTCATAAAATGGATTTCGTTGCATTCTTGGAACATTTAATTCTTTTACCATTCAGAAA
TTGCTCATCAATTTGCTTCTTCCATTGAAAGTTGTAAACTAGAATTCGAAATAATGGAAAAGTTTGTTTGCGGTTGTTCCATTTTACCTCTTTCATTACAATTTC
CTTTTTAAATCCTTA
Protein sequenceShow/hide protein sequence
MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEERKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKKEPKEEVKVEAA
KPIDAAPAAVVVAPAMAEPQKPIAEVAAAKPQKPIAVVEAEPQKPIAVVEAEPQNPIAIVEAEAQKPIAVVEAEPQKPIAVVDEPQKPIAVVDELQKPIAVVEPA
APQKPIAVVEPAEPQKPIAVVLRLAEPQKPLPVAVAEPQKPIVLPVAEPNKPTVEVAASPKGIEVEKKTTMEAPSLEKKTTATTEPSPAVAVAAVTTEKQ