CuGenDBv2

Gene ID	Clc05G12600
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	protein disulfide-isomerase SCO2
Genome location	ClcChr05:10573367..10574907
RNA-Seq Expression	Clc05G12600
Synteny	Clc05G12600
Gene Ontology terms	GO:0009507 - chloroplast (cellular component) GO:0016853 - isomerase activity (molecular function)
InterPro domains	IPR037477 - Protein disulfide-isomerase SCO2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008456126.1 PREDICTED: protein disulfide-isomerase SCO2 [Cucumis melo]

8.6e-84

82.56

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Query:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME
        MFAINP+SLFF SNPTT RQ SIS PPSSFRL  AA GDASP PS SRLFNFPSL+ATD+T  FRLGQ+YDAG  SSP VD A GRFG GNG+VKVNAME
Subjt:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME

Query:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        KKWSRD+ESYLVD++DVLPLPM YPDSSPV P+EIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGI ++  +T
Subjt:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT

XP_022941608.1 protein disulfide-isomerase SCO2 [Cucurbita moschata]

1.5e-83

82.05

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Query:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME
        MFA+NPTSLFF SNPT  RQQSISL PS  R C AAAGDAS GPSFSRLFNFPS++ATD+TG FRLGQEYD GG SS +VDG  GR GSGNGSVK NAME
Subjt:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME

Query:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        KKWSRD+ESYLVD+++VLPLPMTYPDSSPV PEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSG+VSYYNKRGREITCKCIPCLG+ ++  +T
Subjt:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT

XP_022982746.1 protein disulfide-isomerase SCO2 [Cucurbita maxima]

2.5e-83

81.54

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Query:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME
        MFA+NPTSLFF SNPT  RQQSISL PS  R C A AGDAS GPSFSRLFNFPS++ATD+TG FRLGQEYD GG SS TVDG  GR GSGNG VK NAME
Subjt:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME

Query:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        KKWSRD+ESYLVD+++VLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSG+VSYY+KRGREITCKCIPCLG+ ++  +T
Subjt:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT

XP_023517721.1 protein disulfide-isomerase SCO2 [Cucurbita pepo subsp. pepo]

3.3e-83

81.54

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Query:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME
        MFA+NPTSLFF SNPT  RQQSISL PS  R C AAAGDAS GPSFSRLFNFPS++ATD+TG FRLGQEYD GG SS +VDG  GR GSGNGSVK NAME
Subjt:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME

Query:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        KKWSRD+ESYLVD+++VLPLPMTYPDSSPV PEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSG+VSYYNK+GREITCKCIPCLG+ ++  +T
Subjt:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT

XP_038899338.1 protein disulfide-isomerase SCO2 [Benincasa hispida]

2.3e-92

89.23

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Query:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME
        MFAINPTSLFF SNPTTARQQSIS PP SFRLCRAA GDASPGPSFSRLFNFPSL+AT++TG FRLGQEYDAG  SSP VDG  GRFGSGNGSVKVNAME
Subjt:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME

Query:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        KKWSRD+ESYLVDNTDVLPLPMTYPDSSPV PEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGI ++  +T
Subjt:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C370 protein disulfide-isomerase SCO2

4.2e-84

82.56

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Query:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME
        MFAINP+SLFF SNPTT RQ SIS PPSSFRL  AA GDASP PS SRLFNFPSL+ATD+T  FRLGQ+YDAG  SSP VD A GRFG GNG+VKVNAME
Subjt:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME

Query:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        KKWSRD+ESYLVD++DVLPLPM YPDSSPV P+EIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGI ++  +T
Subjt:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT

A0A5D3CPX2 Protein disulfide-isomerase SCO2

4.2e-84

82.56

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Query:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME
        MFAINP+SLFF SNPTT RQ SIS PPSSFRL  AA GDASP PS SRLFNFPSL+ATD+T  FRLGQ+YDAG  SSP VD A GRFG GNG+VKVNAME
Subjt:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME

Query:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        KKWSRD+ESYLVD++DVLPLPM YPDSSPV P+EIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGI ++  +T
Subjt:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT

A0A6J1D717 protein disulfide-isomerase SCO2

1.0e-82

81.54

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Query:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME
        MFAINPTSLFF SNP TAR QS SL PS  R CRA AGDA  GPS SRLFNFPS+AATD+ G FRLG EYD GG SS  VDG AGR G GNGSVKVNAME
Subjt:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME

Query:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        KKWSRD+ESYL D++DVLPLPMTYPDSSPVPPEEIDRRL+CDPQVEDCKEVVYEWTGKCRSCQGSG+VSYYNKRGREITCKCIPCLGI ++  +T
Subjt:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT

A0A6J1FSK5 protein disulfide-isomerase SCO2

7.1e-84

82.05

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Query:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME
        MFA+NPTSLFF SNPT  RQQSISL PS  R C AAAGDAS GPSFSRLFNFPS++ATD+TG FRLGQEYD GG SS +VDG  GR GSGNGSVK NAME
Subjt:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME

Query:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        KKWSRD+ESYLVD+++VLPLPMTYPDSSPV PEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSG+VSYYNKRGREITCKCIPCLG+ ++  +T
Subjt:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT

A0A6J1J076 protein disulfide-isomerase SCO2

1.2e-83

81.54

Show/hide

Query:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME
        MFA+NPTSLFF SNPT  RQQSISL PS  R C A AGDAS GPSFSRLFNFPS++ATD+TG FRLGQEYD GG SS TVDG  GR GSGNG VK NAME
Subjt:  MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAME

Query:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        KKWSRD+ESYLVD+++VLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSG+VSYY+KRGREITCKCIPCLG+ ++  +T
Subjt:  KKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLT

SwissProt top hits

e value

%identity

Alignment

Q93YN0 Protein disulfide-isomerase SCO2

6.7e-39

59.54

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Query:  RLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAMEKKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQG
        RL +E D+   ++ + D +    G+G G+ K       WS+  ESYLVD+ D LPLPMTYPD+SPV P+ IDRRLQCDP VEDC+EVVYEWTGKCRSCQG
Subjt:  RLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAMEKKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQG

Query:  SGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        SG VSYY KRG+E+ CKCIPC GI ++  +T
Subjt:  SGYVSYYNKRGREITCKCIPCLGIVFIDVLT

Arabidopsis top hits

e value

%identity

Alignment

AT3G19220.1 protein disulfide isomerases

4.8e-40

59.54

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Query:  RLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAMEKKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQG
        RL +E D+   ++ + D +    G+G G+ K       WS+  ESYLVD+ D LPLPMTYPD+SPV P+ IDRRLQCDP VEDC+EVVYEWTGKCRSCQG
Subjt:  RLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAMEKKWSRDKESYLVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQG

Query:  SGYVSYYNKRGREITCKCIPCLGIVFIDVLT
        SG VSYY KRG+E+ CKCIPC GI ++  +T
Subjt:  SGYVSYYNKRGREITCKCIPCLGIVFIDVLT

Sequences

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CDS sequence

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ATGTTCGCCATAAATCCTACTTCCCTTTTCTTCGCTTCCAATCCCACCACTGCACGTCAACAATCCATCTCTCTCCCCCCCTCCTCCTTCCGCCTCTGCCGTGCCGCCGC
CGGAGACGCCTCGCCGGGTCCCTCATTTTCCCGTCTCTTCAATTTCCCTTCTCTTGCTGCCACTGACTCCACCGGTGCCTTTCGACTTGGACAAGAGTACGATGCCGGAG
GACCTTCCTCCCCCACTGTCGATGGAGCGGCGGGGAGGTTCGGCAGCGGAAATGGCAGCGTCAAAGTGAACGCCATGGAGAAAAAATGGTCGCGTGATAAGGAGAGTTAT
TTGGTTGATAATACCGACGTTCTCCCTCTTCCTATGACTTATCCGGATTCTTCCCCTGTACCGCCGGAGGAAATCGACCGCCGGCTTCAGTGCGATCCACAAGTGGAGGA
TTGTAAAGAAGTGGTGTATGAATGGACCGGGAAGTGTCGCAGTTGCCAGGGTTCTGGATATGTTAGCTATTATAACAAAAGGGGAAGAGAGATCACTTGCAAATGTATAC
CTTGCCTTGGAATTGTCTTCATTGATGTGCTGACTATGATAAATATGACCATGTTAGGAGCCAGAAAGAATCTCCCAGGAATTTCTGCTCATAATTGA

mRNA sequence

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Protein sequence

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MFAINPTSLFFASNPTTARQQSISLPPSSFRLCRAAAGDASPGPSFSRLFNFPSLAATDSTGAFRLGQEYDAGGPSSPTVDGAAGRFGSGNGSVKVNAMEKKWSRDKESY
LVDNTDVLPLPMTYPDSSPVPPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIVFIDVLTMINMTMLGARKNLPGISAHN

Clc05G12600 (gene) of Watermelon (cordophanus) v2 genome