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Clc05G13150 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G13150
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSenescence-associated protein, putative
Genome locationClcChr05:11379458..11381777
RNA-Seq ExpressionClc05G13150
SyntenyClc05G13150
Gene Ontology termsNA
InterPro domainsIPR040358 - Uncharacterized protein At4g22758-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581236.1 hypothetical protein SDJN03_21238, partial [Cucurbita argyrosperma subsp. sororia]6.9e-4578.23Show/hide
Query:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLP-DK
        +G KR+LI++NVVGSSGPLRF+  EED VCEVIH ALKSYARQARLPLLGT A+NFLLYSSN + P A+LNP ETIGSKQARNFVLCKK AT SPLP D+
Subjt:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLP-DK

Query:  KMKKLMKIKETHGLKAWINKSLSF
         MKKLM +KE+HG KAWINKSLSF
Subjt:  KMKKLMKIKETHGLKAWINKSLSF

XP_022143447.1 uncharacterized protein LOC111013321 [Momordica charantia]4.1e-4570.83Show/hide
Query:  LSNNNK----HIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNF
        L NNN+     I   EK  KR+LITI+VVGS+GPLRF+ NE+D VCEVIH ALKSYARQARLPLLG DATNFLLY +N +     LNP E IG KQARNF
Subjt:  LSNNNK----HIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNF

Query:  VLCKKAATPSPLPDKKMKKLMKIKETHGLKAWINKSLSFKILSH
        VLCKK  TP PL D+KMKKLM IKE+HG KAWINKSLSFKI SH
Subjt:  VLCKKAATPSPLPDKKMKKLMKIKETHGLKAWINKSLSFKILSH

XP_022934727.1 uncharacterized protein LOC111441823 [Cucurbita moschata]6.9e-4578.23Show/hide
Query:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLP-DK
        +G KR+LI++NVVGSSGPLRF+  EED VCEVIH ALKSYARQARLPLLGT A+NFLLYSSN + P A+LNP ETIGSKQARNFVLCKK AT SPLP D+
Subjt:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLP-DK

Query:  KMKKLMKIKETHGLKAWINKSLSF
         MKKLM +KE+HG KAWINKSLSF
Subjt:  KMKKLMKIKETHGLKAWINKSLSF

XP_022983917.1 uncharacterized protein LOC111482395 [Cucurbita maxima]2.3e-4879.84Show/hide
Query:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLP-DK
        +G KR+LI++NVVGSSGPLRF+  EED VCEVIH ALKSYARQARLPLLGT A+NFLLYSS+ + P A+LNPRETIGSKQARNFVLCKKAATPSPLP D+
Subjt:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLP-DK

Query:  KMKKLMKIKETHGLKAWINKSLSFKILSH
        KMKKLM +KE+HG KAWIN SLSFKI SH
Subjt:  KMKKLMKIKETHGLKAWINKSLSFKILSH

XP_031739154.1 uncharacterized protein LOC116402875 [Cucumis sativus]3.9e-4876.39Show/hide
Query:  MKRSLSNNNKHIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNF
        MKRSLSNNNKH RD  K IKRVLITINV+GSSGPLRF+V EED VCEVIHIALKSYARQARLPLLGTD TNFLLYSSN      ALNP E IGSKQARNF
Subjt:  MKRSLSNNNKHIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNF

Query:  VLCKKAATPSPLPDKKMKKLMKIKETHGLKAWINKSLSFKILSH
        VLCKK  T          K M IKE+HG KAWINKSL+FKILSH
Subjt:  VLCKKAATPSPLPDKKMKKLMKIKETHGLKAWINKSLSFKILSH

TrEMBL top hitse value%identityAlignment
A0A0A0LBQ6 Uncharacterized protein1.9e-4876.39Show/hide
Query:  MKRSLSNNNKHIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNF
        MKRSLSNNNKH RD  K IKRVLITINV+GSSGPLRF+V EED VCEVIHIALKSYARQARLPLLGTD TNFLLYSSN      ALNP E IGSKQARNF
Subjt:  MKRSLSNNNKHIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNF

Query:  VLCKKAATPSPLPDKKMKKLMKIKETHGLKAWINKSLSFKILSH
        VLCKK  T          K M IKE+HG KAWINKSL+FKILSH
Subjt:  VLCKKAATPSPLPDKKMKKLMKIKETHGLKAWINKSLSFKILSH

A0A1S3C4I6 uncharacterized protein LOC1034967952.8e-2850Show/hide
Query:  MKRSLSNNNKHIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNF
        +KRS +N +K +    K   R L++INV+GS+GP+RF+ NE+D VCEVI  +L  YARQ RLP+LGT+  NF LY  N D  R AL+PRE+IGSKQ R+F
Subjt:  MKRSLSNNNKHIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNF

Query:  VLCKKAATPSPLPDKKMKKLMKIKETHGLKAWINKSLSFKILSH
        +LCKK  T   L   +     + KE    K W+NKSL++ I SH
Subjt:  VLCKKAATPSPLPDKKMKKLMKIKETHGLKAWINKSLSFKILSH

A0A6J1CQV0 uncharacterized protein LOC1110133212.0e-4570.83Show/hide
Query:  LSNNNK----HIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNF
        L NNN+     I   EK  KR+LITI+VVGS+GPLRF+ NE+D VCEVIH ALKSYARQARLPLLG DATNFLLY +N +     LNP E IG KQARNF
Subjt:  LSNNNK----HIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNF

Query:  VLCKKAATPSPLPDKKMKKLMKIKETHGLKAWINKSLSFKILSH
        VLCKK  TP PL D+KMKKLM IKE+HG KAWINKSLSFKI SH
Subjt:  VLCKKAATPSPLPDKKMKKLMKIKETHGLKAWINKSLSFKILSH

A0A6J1F3L9 uncharacterized protein LOC1114418233.3e-4578.23Show/hide
Query:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLP-DK
        +G KR+LI++NVVGSSGPLRF+  EED VCEVIH ALKSYARQARLPLLGT A+NFLLYSSN + P A+LNP ETIGSKQARNFVLCKK AT SPLP D+
Subjt:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLP-DK

Query:  KMKKLMKIKETHGLKAWINKSLSF
         MKKLM +KE+HG KAWINKSLSF
Subjt:  KMKKLMKIKETHGLKAWINKSLSF

A0A6J1J0M6 uncharacterized protein LOC1114823951.1e-4879.84Show/hide
Query:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLP-DK
        +G KR+LI++NVVGSSGPLRF+  EED VCEVIH ALKSYARQARLPLLGT A+NFLLYSS+ + P A+LNPRETIGSKQARNFVLCKKAATPSPLP D+
Subjt:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLP-DK

Query:  KMKKLMKIKETHGLKAWINKSLSFKILSH
        KMKKLM +KE+HG KAWIN SLSFKI SH
Subjt:  KMKKLMKIKETHGLKAWINKSLSFKILSH

SwissProt top hitse value%identityAlignment
Q56XJ7 Uncharacterized protein At4g227582.3e-0636.67Show/hide
Query:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKA
        K   +V+I++ V GS GP+R +V    +V E I I +  Y ++ R P L  D+  F L+ S+F      L  RE IG   +R+F + KKA
Subjt:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKA

Arabidopsis top hitse value%identityAlignment
AT1G23150.1 unknown protein1.5e-2142.64Show/hide
Query:  RVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLPDKKMKKL
        R+LI++  +GS+GP+RF+ NE D V  VI  ALK YAR+ RLP+LG+D  +F+ Y         AL+P E IGS   RNF+LCKK      + + K +  
Subjt:  RVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPSPLPDKKMKKL

Query:  MKIKETH-----GLKAWINKSLSFKILSH
          I           KAWINKSL  K+ +H
Subjt:  MKIKETH-----GLKAWINKSLSFKILSH

AT1G70780.1 unknown protein5.1e-2241.33Show/hide
Query:  NKHIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAAT
        NK  ++      R+LI++ V+GS+GP+RF+  E+D V  VI  ALK YAR+ RLPLLG+D  +FLLY         AL+  + IGS  ARNF+LC+K   
Subjt:  NKHIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAAT

Query:  PSPLPDKKMKKLMKIKETHG--------------LKAWINKSLSFKILSH
            P++K     K++E++G              LKAWINKS + K+ SH
Subjt:  PSPLPDKKMKKLMKIKETHG--------------LKAWINKSLSFKILSH

AT4G22758.1 unknown protein1.6e-0736.67Show/hide
Query:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKA
        K   +V+I++ V GS GP+R +V    +V E I I +  Y ++ R P L  D+  F L+ S+F      L  RE IG   +R+F + KKA
Subjt:  KGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKA

AT5G37730.1 unknown protein1.3e-2040.8Show/hide
Query:  NNNKHIRD-YEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKK
        N N++++   ++  K++L+++NV+GS GP+RFL NE+D V   I+  LK+YARQ R+P+LG D  NF+ YS N  +    L+P+E IGS    NF++CKK
Subjt:  NNNKHIRD-YEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKK

Query:  AATPSPLPDKKMKKLMKIKETHGLK
           P PL   +  +  + +  HG K
Subjt:  AATPSPLPDKKMKKLMKIKETHGLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGAAGTTTGTCGAATAATAATAAACATATAAGAGATTATGAGAAGGGAATAAAGAGAGTGTTGATCACTATAAATGTTGTGGGAAGTTCAGGTCCATTAAGATT
CCTGGTGAATGAAGAAGATTCAGTTTGTGAAGTTATTCATATTGCTCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTTCTTGGCACTGATGCTACCAACTTTCTTC
TCTACTCTTCTAATTTTGACTACCCACGTGCTGCTCTTAATCCAAGGGAAACCATAGGATCCAAGCAAGCAAGAAATTTTGTGTTGTGTAAGAAGGCAGCCACACCATCC
CCATTGCCTGATAAAAAGATGAAAAAGCTGATGAAAATAAAGGAAACCCATGGCTTGAAGGCTTGGATTAACAAGTCCTTAAGTTTTAAGATACTATCCCATTAA
mRNA sequenceShow/hide mRNA sequence
CGACCTTTGAGTGCGGGTAGTGGCACATTAACACTTTTGACTTCTCTCTTTCCATATATCTTCATTGAAGGGGAGGAAAGGGGTGAAAATCAGATCAAGGGATAATGAAG
AGAAGTTTGTCGAATAATAATAAACATATAAGAGATTATGAGAAGGGAATAAAGAGAGTGTTGATCACTATAAATGTTGTGGGAAGTTCAGGTCCATTAAGATTCCTGGT
GAATGAAGAAGATTCAGTTTGTGAAGTTATTCATATTGCTCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTTCTTGGCACTGATGCTACCAACTTTCTTCTCTACT
CTTCTAATTTTGACTACCCACGTGCTGCTCTTAATCCAAGGGAAACCATAGGATCCAAGCAAGCAAGAAATTTTGTGTTGTGTAAGAAGGCAGCCACACCATCCCCATTG
CCTGATAAAAAGATGAAAAAGCTGATGAAAATAAAGGAAACCCATGGCTTGAAGGCTTGGATTAACAAGTCCTTAAGTTTTAAGATACTATCCCATTAAGATAATTGTGT
GCTTCTATTTGTATAAGTCCCGTCGATAATCATTTGGACTACTGTACTTTAAAAAATTAATGAGTGGCTTTAACATAAATCAGAAATGTTTACATCTTATCTCATAATCA
TTTGGATTTTGAAATTTGTGTATCATTGTTTTTTTCTTTTTAATCTTTTTTAATTAAGCATTTGAGTTTGTAGCAAATTATATGCTAAAAACAATTTTTTTTTTTAAGAA
AAAGACTATTTAAAAACAAGAAAAGTCAACACTCAGACTTAATTTTTCAAAATAACTAAAAAAAATAAATAACGATGAGACAAATAATCGACGGGTGAAAGCAGATTTAT
AAACTTAATTTTTGATACAAAATATTATTTACTTTGAGATTCAATTTCAATTATCTCCCAATCAATATAAAAAGACCATTG
Protein sequenceShow/hide protein sequence
MKRSLSNNNKHIRDYEKGIKRVLITINVVGSSGPLRFLVNEEDSVCEVIHIALKSYARQARLPLLGTDATNFLLYSSNFDYPRAALNPRETIGSKQARNFVLCKKAATPS
PLPDKKMKKLMKIKETHGLKAWINKSLSFKILSH