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Clc05G13440 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G13440
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBeta-hexosaminidase subunit
Genome locationClcChr05:11839879..11840512
RNA-Seq ExpressionClc05G13440
SyntenyClc05G13440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064690.1 Beta-hexosaminidase subunit [Cucumis melo var. makuwa]4.8e-0461.76Show/hide
Query:  WELVSKVQKDGGLDLGGLKARNLALLAKWGWHSI
        W LV++ Q DGGL++GGLK +NLALL+ WGW  I
Subjt:  WELVSKVQKDGGLDLGGLKARNLALLAKWGWHSI
XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]8.8e-0680.65Show/hide
Query:  WELVSKVQKDGGLDLGGLKARNLALLAKWGW
        WELV+K Q+DGGL LGGL+ARNLA LAKWGW
Subjt:  WELVSKVQKDGGLDLGGLKARNLALLAKWGW
TrEMBL top hitse value%identityAlignment
A0A5A7VBZ2 Beta-hexosaminidase subunit2.3e-0461.76Show/hide
Query:  WELVSKVQKDGGLDLGGLKARNLALLAKWGWHSI
        W LV++ Q DGGL++GGLK +NLALL+ WGW  I
Subjt:  WELVSKVQKDGGLDLGGLKARNLALLAKWGWHSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGTTTCTTTTGGGAGCTTGTTTCTAAAGTCCAAAAGGATGGAGGACTCGACCTAGGAGGTCTAAAAGCAAGAAATTTGGCCTTATTAGCCAAATGGGGGTGGCA
TAGTATCCCTTTTCTTGGAGTACCTCAAATATCTCAGGATTCTAAAGACAGCTTCAAAGTGAGCCGGCCCAGGGATCAAGGATATACTTTCTTCGGCTCCTTTGTGCCTT
TTGATGATGTTACCTCCTTTGGCTCCTGTGTGCCTTCTGATGCCAAAGCACAAGCCTCCCCTCAAACTGAGCCAAACATAGTTCTTAAACAACTAGGGACAAAAGACTTA
GGATTCTGTAGCAGAGGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGTTTCTTTTGGGAGCTTGTTTCTAAAGTCCAAAAGGATGGAGGACTCGACCTAGGAGGTCTAAAAGCAAGAAATTTGGCCTTATTAGCCAAATGGGGGTGGCA
TAGTATCCCTTTTCTTGGAGTACCTCAAATATCTCAGGATTCTAAAGACAGCTTCAAAGTGAGCCGGCCCAGGGATCAAGGATATACTTTCTTCGGCTCCTTTGTGCCTT
TTGATGATGTTACCTCCTTTGGCTCCTGTGTGCCTTCTGATGCCAAAGCACAAGCCTCCCCTCAAACTGAGCCAAACATAGTTCTTAAACAACTAGGGACAAAAGACTTA
GGATTCTGTAGCAGAGGATTTTGA
Protein sequenceShow/hide protein sequence
MKSFFWELVSKVQKDGGLDLGGLKARNLALLAKWGWHSIPFLGVPQISQDSKDSFKVSRPRDQGYTFFGSFVPFDDVTSFGSCVPSDAKAQASPQTEPNIVLKQLGTKDL
GFCSRGF