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Clc05G13530 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G13530
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionOlfactory receptor 4C13 like
Genome locationClcChr05:12020163..12023459
RNA-Seq ExpressionClc05G13530
SyntenyClc05G13530
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607004.1 hypothetical protein SDJN03_00346, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3668.31Show/hide
Query:  PNSLNTDHHFPLF--LLRPPWPVLSIFALVIFLCTSSRKSNKS---QRRNFVSKMNSNISSRAISMAKMISWRKVEAADEERGSS-------DLSGEDEE
        P+  N  +H P     L     VLSIFALVIFLCTSSRKS K    Q+RNFV+K+NSNISSRAIS+AKMISWRKVEAADE+ G         DLSG+D  
Subjt:  PNSLNTDHHFPLF--LLRPPWPVLSIFALVIFLCTSSRKSNKS---QRRNFVSKMNSNISSRAISMAKMISWRKVEAADEERGSS-------DLSGEDEE

Query:  EEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK
         ++EVWRKTIIRGERCRPLEFSGKIDYDSDGNLL DS REFK
Subjt:  EEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK

KAG7036703.1 hypothetical protein SDJN02_00323, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-3769.29Show/hide
Query:  PNSLNTDHHFPLF--LLRPPWPVLSIFALVIFLCTSSRKSNKS---QRRNFVSKMNSNISSRAISMAKMISWRKVEAADEERGSS-----DLSGEDEEEE
        P+  N  +H P     L     VLSIFALVIFLCTSSRKS K    Q+RNFV+K+NSNISSRAIS+AKMISWRKVEAADE+ G       DLSG+D   +
Subjt:  PNSLNTDHHFPLF--LLRPPWPVLSIFALVIFLCTSSRKSNKS---QRRNFVSKMNSNISSRAISMAKMISWRKVEAADEERGSS-----DLSGEDEEEE

Query:  EEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK
        +EVWRKTIIRGERCRPLEFSGKIDYDSDGNLL DS REFK
Subjt:  EEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK

KGN57848.1 hypothetical protein Csa_010872 [Cucumis sativus]1.0e-3976.92Show/hide
Query:  HFPLFLLRPPWPVLSIFALVIFLCTSSRKSNKSQ--RRNFVSKMNSNISSRAISMAKMISWRKVEAA------DEERGSSDLSGEDEEEEEEVWRKTIIR
        HF  FL+     +LSIFAL+IFLCTSSRKSNKSQ  R NFVSKMNSNISSRAISMAKMISWRKVEAA      +EERGS      D++EEEEVWRKTIIR
Subjt:  HFPLFLLRPPWPVLSIFALVIFLCTSSRKSNKSQ--RRNFVSKMNSNISSRAISMAKMISWRKVEAA------DEERGSSDLSGEDEEEEEEVWRKTIIR

Query:  GERCRPLEFSGKIDYDSDGNLLSDSNREFK
        GERCRPLEFSGKIDYDSDGNLL DSNR+FK
Subjt:  GERCRPLEFSGKIDYDSDGNLLSDSNREFK

TYK22452.1 hypothetical protein E5676_scaffold712G00010 [Cucumis melo var. makuwa]2.7e-3770.42Show/hide
Query:  ISTNNRAPNSLNTDHHFPLFLLRPPWPVLSIFALVIFLCTSSRKSNKSQ--RRNFVSKMNSNISSRAISMAKMISWRKVEAAD---EERGSSDLSGEDEE
        IS  +  P+ L    HF   +L     +LSIFAL+IFLCTSS KSNKSQ  +  FVSKMNSNISSRAISMAK+ISWRKVEAAD   EERGS   S ++ E
Subjt:  ISTNNRAPNSLNTDHHFPLFLLRPPWPVLSIFALVIFLCTSSRKSNKSQ--RRNFVSKMNSNISSRAISMAKMISWRKVEAAD---EERGSSDLSGEDEE

Query:  EEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK
        +EEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLL DSNR+FK
Subjt:  EEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK

XP_038906595.1 uncharacterized protein LOC120092546 [Benincasa hispida]2.7e-3286Show/hide
Query:  VLSIFALVIFLCTSSRKSNKS-QRRNFVSKMNSNISSRAISMAKMISWRKVEAADEE-----RGSSDLSGEDEEE-EEEVWRKTIIRGERCRPLEFSGKI
        VLSIFALV+FLCTSSRKSNKS QRRNFVSKMNSNISSRAISMAKMISWRKVEAADEE     RGS +LSG+DEEE EEEVWRKTIIRGERCRPLEFS  +
Subjt:  VLSIFALVIFLCTSSRKSNKS-QRRNFVSKMNSNISSRAISMAKMISWRKVEAADEE-----RGSSDLSGEDEEE-EEEVWRKTIIRGERCRPLEFSGKI

TrEMBL top hitse value%identityAlignment
A0A0A0L7R8 Uncharacterized protein4.9e-4076.92Show/hide
Query:  HFPLFLLRPPWPVLSIFALVIFLCTSSRKSNKSQ--RRNFVSKMNSNISSRAISMAKMISWRKVEAA------DEERGSSDLSGEDEEEEEEVWRKTIIR
        HF  FL+     +LSIFAL+IFLCTSSRKSNKSQ  R NFVSKMNSNISSRAISMAKMISWRKVEAA      +EERGS      D++EEEEVWRKTIIR
Subjt:  HFPLFLLRPPWPVLSIFALVIFLCTSSRKSNKSQ--RRNFVSKMNSNISSRAISMAKMISWRKVEAA------DEERGSSDLSGEDEEEEEEVWRKTIIR

Query:  GERCRPLEFSGKIDYDSDGNLLSDSNREFK
        GERCRPLEFSGKIDYDSDGNLL DSNR+FK
Subjt:  GERCRPLEFSGKIDYDSDGNLLSDSNREFK

A0A5A7V4T5 Uncharacterized protein8.9e-2683.33Show/hide
Query:  MNSNISSRAISMAKMISWRKVEAAD---EERGSSDLSGEDEEEEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK
        MNSNISSRAISMAK+ISWRKVEAAD   EERGS   S ++ E+EEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLL DSNR+FK
Subjt:  MNSNISSRAISMAKMISWRKVEAAD---EERGSSDLSGEDEEEEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK

A0A5D3DFS8 Uncharacterized protein1.3e-3770.42Show/hide
Query:  ISTNNRAPNSLNTDHHFPLFLLRPPWPVLSIFALVIFLCTSSRKSNKSQ--RRNFVSKMNSNISSRAISMAKMISWRKVEAAD---EERGSSDLSGEDEE
        IS  +  P+ L    HF   +L     +LSIFAL+IFLCTSS KSNKSQ  +  FVSKMNSNISSRAISMAK+ISWRKVEAAD   EERGS   S ++ E
Subjt:  ISTNNRAPNSLNTDHHFPLFLLRPPWPVLSIFALVIFLCTSSRKSNKSQ--RRNFVSKMNSNISSRAISMAKMISWRKVEAAD---EERGSSDLSGEDEE

Query:  EEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK
        +EEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLL DSNR+FK
Subjt:  EEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK

A0A5E4G755 PREDICTED: LOC1002770033.0e-2153.45Show/hide
Query:  SIFALVIFLCTSSRKSNKSQRR-------------NFVSKMNSNISSRAISMAKMISWRKVEAADEERGSSDLSGEDEEEEEEVWRKTIIRGERCRPLEF
        S+F+LVIFLC +SRKS KS ++              F++K+NS ISS+A++MAKM+SWRK+EA +E++   D   +D+  +E VWRK+II GERC PL F
Subjt:  SIFALVIFLCTSSRKSNKSQRR-------------NFVSKMNSNISSRAISMAKMISWRKVEAADEERGSSDLSGEDEEEEEEVWRKTIIRGERCRPLEF

Query:  SGKIDYDSDGNLLSDS
        SGKIDYDSDGNL  +S
Subjt:  SGKIDYDSDGNLLSDS

A0A5N5G8W9 Uncharacterized protein3.9e-2154.17Show/hide
Query:  PWPVLSIFALVIFLCTSSRKS---------NKSQRRNFVSKMNSNISSRAISMAKMISWRKVEAADEERGSSDLSGEDEEEEEEVWRKTIIRGERCRPLE
        P    SIF+++I LC S++KS          KS+   FV+K+N  ISS+A++MAKMISWRKVEAA EE   +D       ++E VW+K I+ GERC PL+
Subjt:  PWPVLSIFALVIFLCTSSRKS---------NKSQRRNFVSKMNSNISSRAISMAKMISWRKVEAADEERGSSDLSGEDEEEEEEVWRKTIIRGERCRPLE

Query:  FSGKIDYDSDGNLLSDSNRE
        FSGKI YDSDGNLLSDS RE
Subjt:  FSGKIDYDSDGNLLSDSNRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein5.0e-0551.35Show/hide
Query:  EEEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSD
        EEE  +W++ I+ G +C PL+FSG I YDS+G LL++
Subjt:  EEEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTCAAACGAATTTGTAGTTTTGGAAAGACTGGTATCTAGACGCTCTACCTTCAAAATCGAAGCACCTGTTGGAGCGCCAGGTAGGGCCCGAGTGCTCACTGCCCA
ACGCCTAGGAGCTCCACGGATTCTCCAAAATTATAGCTCTCGGGTCTATAGCACTGGGGGTAGCATCTTAGGCGCTGCCTGCATTAGGAGTGACCGGATCGCTTGGGATA
AATTGAGTGGGTGCATAAAAATCTCTACAAACAACAGAGCTCCCAATTCGCTTAACACAGATCACCATTTTCCTCTTTTCCTACTCCGTCCGCCATGGCCAGTTCTCTCC
ATCTTCGCGCTCGTGATTTTCCTCTGCACCTCTTCCAGAAAATCGAACAAATCGCAACGGAGGAATTTCGTGTCGAAGATGAATAGTAACATCAGTTCTAGGGCGATTTC
AATGGCGAAGATGATTTCGTGGAGAAAAGTGGAGGCAGCCGATGAAGAAAGAGGAAGTAGTGATTTGAGTGGTGAGGATGAAGAAGAAGAAGAAGAGGTTTGGAGGAAGA
CTATTATTAGAGGTGAACGGTGTCGTCCGTTGGAATTTTCTGGTAAAATTGATTATGATTCTGATGGAAATTTGTTGAGTGATTCAAACAGGGAATTCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTTCAAACGAATTTGTAGTTTTGGAAAGACTGGTATCTAGACGCTCTACCTTCAAAATCGAAGCACCTGTTGGAGCGCCAGGTAGGGCCCGAGTGCTCACTGCCCA
ACGCCTAGGAGCTCCACGGATTCTCCAAAATTATAGCTCTCGGGTCTATAGCACTGGGGGTAGCATCTTAGGCGCTGCCTGCATTAGGAGTGACCGGATCGCTTGGGATA
AATTGAGTGGGTGCATAAAAATCTCTACAAACAACAGAGCTCCCAATTCGCTTAACACAGATCACCATTTTCCTCTTTTCCTACTCCGTCCGCCATGGCCAGTTCTCTCC
ATCTTCGCGCTCGTGATTTTCCTCTGCACCTCTTCCAGAAAATCGAACAAATCGCAACGGAGGAATTTCGTGTCGAAGATGAATAGTAACATCAGTTCTAGGGCGATTTC
AATGGCGAAGATGATTTCGTGGAGAAAAGTGGAGGCAGCCGATGAAGAAAGAGGAAGTAGTGATTTGAGTGGTGAGGATGAAGAAGAAGAAGAAGAGGTTTGGAGGAAGA
CTATTATTAGAGGTGAACGGTGTCGTCCGTTGGAATTTTCTGGTAAAATTGATTATGATTCTGATGGAAATTTGTTGAGTGATTCAAACAGGGAATTCAAATAATCTGTT
GAATTTTTTGTGCTTTAA
Protein sequenceShow/hide protein sequence
MRSNEFVVLERLVSRRSTFKIEAPVGAPGRARVLTAQRLGAPRILQNYSSRVYSTGGSILGAACIRSDRIAWDKLSGCIKISTNNRAPNSLNTDHHFPLFLLRPPWPVLS
IFALVIFLCTSSRKSNKSQRRNFVSKMNSNISSRAISMAKMISWRKVEAADEERGSSDLSGEDEEEEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK