; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G13800 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G13800
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:12727616..12728903
RNA-Seq ExpressionClc05G13800
SyntenyClc05G13800
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145840.1 uncharacterized protein LOC101219659 isoform X2 [Cucumis sativus]9.4e-7483.94Show/hide
Query:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL
        MAS LFLL LFTIS SI  S ARPCKSLFLSFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSS DPLFPS+   TDILRFDLPRP  V+A+T     
Subjt:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL

Query:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG
        QH PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFG RSSVYDDF E EDD SDDNKENIKKMGYI IPDD APVKSVG
Subjt:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG

XP_008457043.1 PREDICTED: uncharacterized protein LOC103496817 isoform X2 [Cucumis melo]7.2e-7483.94Show/hide
Query:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL
        MAS LFLL LFTIS SI  S ARPCKSLFLSFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSSSDPLFPS+   TDILRFDLPRP  V+A T     
Subjt:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL

Query:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG
        QH PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFG RSSVYDDF E +DD SDDNKENIKKMGYI IPDD APVKSVG
Subjt:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG

XP_008457044.1 PREDICTED: uncharacterized protein LOC103496817 isoform X3 [Cucumis melo]7.2e-7483.94Show/hide
Query:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL
        MAS LFLL LFTIS SI  S ARPCKSLFLSFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSSSDPLFPS+   TDILRFDLPRP  V+A T     
Subjt:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL

Query:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG
        QH PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFG RSSVYDDF E +DD SDDNKENIKKMGYI IPDD APVKSVG
Subjt:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG

XP_038904403.1 uncharacterized protein LOC120090765 isoform X1 [Benincasa hispida]3.4e-8491.1Show/hide
Query:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL
        MASRLFLL LFTISLSI  SHARPCKSLFLSFSL RHP+LDSR PFSQMAIIVDITEFK SSFSSS+DPLFPSL  D+DILRFDLPRPR VAAATQTHSL
Subjt:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL

Query:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLEEDDFSDDNKENIKKMGYIKIPDDAAPVKSV
        QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFG RSSVYDD  EEDD SDDNKENIKKMGYIKIPDD APVKSV
Subjt:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLEEDDFSDDNKENIKKMGYIKIPDDAAPVKSV

XP_038904410.1 uncharacterized protein LOC120090765 isoform X2 [Benincasa hispida]6.9e-8591.15Show/hide
Query:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL
        MASRLFLL LFTISLSI  SHARPCKSLFLSFSL RHP+LDSR PFSQMAIIVDITEFK SSFSSS+DPLFPSL  D+DILRFDLPRPR VAAATQTHSL
Subjt:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL

Query:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLEEDDFSDDNKENIKKMGYIKIPDDAAPVKSVG
        QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFG RSSVYDD  EEDD SDDNKENIKKMGYIKIPDD APVKSVG
Subjt:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLEEDDFSDDNKENIKKMGYIKIPDDAAPVKSVG

TrEMBL top hitse value%identityAlignment
A0A0A0L741 Uncharacterized protein4.6e-7483.94Show/hide
Query:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL
        MAS LFLL LFTIS SI  S ARPCKSLFLSFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSS DPLFPS+   TDILRFDLPRP  V+A+T     
Subjt:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL

Query:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG
        QH PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFG RSSVYDDF E EDD SDDNKENIKKMGYI IPDD APVKSVG
Subjt:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG

A0A1S3C467 uncharacterized protein LOC103496817 isoform X11.7e-7383.85Show/hide
Query:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL
        MAS LFLL LFTIS SI  S ARPCKSLFLSFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSSSDPLFPS+   TDILRFDLPRP  V+A T     
Subjt:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL

Query:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSV
        QH PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFG RSSVYDDF E +DD SDDNKENIKKMGYI IPDD APVKSV
Subjt:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSV

A0A1S3C4K4 uncharacterized protein LOC103496817 isoform X33.5e-7483.94Show/hide
Query:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL
        MAS LFLL LFTIS SI  S ARPCKSLFLSFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSSSDPLFPS+   TDILRFDLPRP  V+A T     
Subjt:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL

Query:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG
        QH PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFG RSSVYDDF E +DD SDDNKENIKKMGYI IPDD APVKSVG
Subjt:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG

A0A1S3C4P1 uncharacterized protein LOC103496817 isoform X23.5e-7483.94Show/hide
Query:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL
        MAS LFLL LFTIS SI  S ARPCKSLFLSFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSSSDPLFPS+   TDILRFDLPRP  V+A T     
Subjt:  MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSL

Query:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG
        QH PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFG RSSVYDDF E +DD SDDNKENIKKMGYI IPDD APVKSVG
Subjt:  QHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLE-EDDFSDDNKENIKKMGYIKIPDDAAPVKSVG

A0A6J1GC62 uncharacterized protein LOC1114528242.8e-6376.17Show/hide
Query:  RLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFKS--SFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSLQH
        RLFLL L T+SL I S  ARPCKSLF+SFS+HRHPTLDSRDPFS+MAIIVDITE KS  S SSSSD LF    GD D+LR DLPR RA   A+Q HSLQ 
Subjt:  RLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFKS--SFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSLQH

Query:  LP----YDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLEEDDFSDDNKENIKKMGYIKIPDDAAPVKSV
        LP    YDF+SLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSL + QF  RSSVYDD  EE DFSDDNKENIKKMGY+KIP+D A VKSV
Subjt:  LP----YDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLEEDDFSDDNKENIKKMGYIKIPDDAAPVKSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65720.1 unknown protein2.3e-1738.46Show/hide
Query:  LSISS-SHARPCKS-LFLSFSLH---RHPTLDSRDPFSQMAIIVDITEFKSSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSLQHLPYDFTSL
        LSI++ + ARPCK+ L  S+SL     +P L+S    ++   +  I                       ++ F + R           SL  +  +  S 
Subjt:  LSISS-SHARPCKS-LFLSFSLH---RHPTLDSRDPFSQMAIIVDITEFKSSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSLQHLPYDFTSL

Query:  RDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLEEDDFSDDNKE--NIKKMGYIKIPDDA-APVK
        RDRT+DILSVVVALLFGVGCGALTAATMYL ++L   +       YD   EEDD+ +D  +  ++KK+GY+KIP  A APVK
Subjt:  RDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLEEDDFSDDNKE--NIKKMGYIKIPDDA-APVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCGTCTCTTTCTCCTCCTTCTCTTCACAATTTCCCTCTCAATTTCCTCCTCTCATGCTCGCCCCTGCAAATCCCTCTTCCTTTCATTTTCCCTTCATCGTCA
CCCAACCCTCGATTCCCGCGATCCCTTTTCCCAGATGGCCATTATCGTCGACATCACTGAGTTCAAATCCTCCTTCTCCTCTTCTTCCGATCCCCTTTTCCCCTCCCTCA
CCGGCGACACCGACATCCTCCGCTTCGATCTCCCTCGTCCTAGGGCTGTTGCAGCAGCAACCCAAACCCACTCCCTTCAACACCTCCCTTACGACTTCACCTCTCTCCGT
GATCGCACCAAGGATATCCTCAGCGTTGTTGTCGCTCTGCTCTTCGGCGTTGGCTGTGGCGCTCTCACTGCTGCCACTATGTATTTGGCTTACTCATTGTTCGCTGGCCA
ATTTGGGCGTCGCTCCTCGGTGTATGACGACTTTTTGGAGGAAGATGATTTCAGTGATGATAACAAGGAGAACATTAAGAAGATGGGTTACATCAAGATCCCTGACGACG
CTGCCCCGGTTAAATCAGTGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGCGTCTCTTTCTCCTCCTTCTCTTCACAATTTCCCTCTCAATTTCCTCCTCTCATGCTCGCCCCTGCAAATCCCTCTTCCTTTCATTTTCCCTTCATCGTCA
CCCAACCCTCGATTCCCGCGATCCCTTTTCCCAGATGGCCATTATCGTCGACATCACTGAGTTCAAATCCTCCTTCTCCTCTTCTTCCGATCCCCTTTTCCCCTCCCTCA
CCGGCGACACCGACATCCTCCGCTTCGATCTCCCTCGTCCTAGGGCTGTTGCAGCAGCAACCCAAACCCACTCCCTTCAACACCTCCCTTACGACTTCACCTCTCTCCGT
GATCGCACCAAGGATATCCTCAGCGTTGTTGTCGCTCTGCTCTTCGGCGTTGGCTGTGGCGCTCTCACTGCTGCCACTATGTATTTGGCTTACTCATTGTTCGCTGGCCA
ATTTGGGCGTCGCTCCTCGGTGTATGACGACTTTTTGGAGGAAGATGATTTCAGTGATGATAACAAGGAGAACATTAAGAAGATGGGTTACATCAAGATCCCTGACGACG
CTGCCCCGGTTAAATCAGTGGGTTAG
Protein sequenceShow/hide protein sequence
MASRLFLLLLFTISLSISSSHARPCKSLFLSFSLHRHPTLDSRDPFSQMAIIVDITEFKSSFSSSSDPLFPSLTGDTDILRFDLPRPRAVAAATQTHSLQHLPYDFTSLR
DRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGRRSSVYDDFLEEDDFSDDNKENIKKMGYIKIPDDAAPVKSVG