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Clc05G14040 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G14040
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:13298119..13299233
RNA-Seq ExpressionClc05G14040
SyntenyClc05G14040
Gene Ontology termsNA
InterPro domainsIPR040358 - Uncharacterized protein At4g22758-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457016.1 PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo]3.2e-5881.51Show/hide
Query:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL
        MLKRST NK KKV T+TK NRFLVSINVLGSTGPVRFV NEDDLVCEVIKTSLTLYARQ RLP LGTNVDNF L+ VNDEKR+AL+PRE+IGSKQVRHFL
Subjt:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL

Query:  LCKKQGTSHALLPNEKIS--EEKGRNNWKTWLNKSLSYKIQSHCML
        LCKKQGTSH+LL NEK S   EK + +WK WLNKSL+Y IQSHCML
Subjt:  LCKKQGTSHALLPNEKIS--EEKGRNNWKTWLNKSLSYKIQSHCML

XP_011651392.1 uncharacterized protein LOC105434881 [Cucumis sativus]8.1e-6282.43Show/hide
Query:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL
        MLKRST  K KKV T+TK NRFLVSINV+GSTGP+RFV NEDDLVCE+IKTSLTLYARQARLP LGTNVDNFILFCVNDEKR+AL+PRE+IGSKQVRHFL
Subjt:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL

Query:  LCKKQGTSHALLPNEKIS----EEKGRNNWKTWLNKSLSYKIQSHCML
        LCKKQG+ H+LL NEK+S    EEKGRN+WK WLNKSLSY IQSHCML
Subjt:  LCKKQGTSHALLPNEKIS----EEKGRNNWKTWLNKSLSYKIQSHCML

XP_022143314.1 uncharacterized protein LOC111013214 [Momordica charantia]2.7e-4173.28Show/hide
Query:  LKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIG-SKQVRHFL
        LKR+T NK+KK ITS K +RFL+SINVLGSTGP+RFVVNEDDLVCEV+KT+L  YARQARLP LGTNVDNFIL+CVND    AL+PRETIG SKQVRHFL
Subjt:  LKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIG-SKQVRHFL

Query:  LCKKQGTSHALLPNE------KISEEKGRNN
        LCKKQGTSHA  PN+      ++ EEK RN+
Subjt:  LCKKQGTSHALLPNE------KISEEKGRNN

XP_022948336.1 uncharacterized protein LOC111452042 [Cucurbita moschata]1.6e-4168.66Show/hide
Query:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL
        MLKRST       + ++K NR LVS+NV+GSTGP+RFV NEDDLVCEV+KT+LT YAR ARLPTLGTNVDNF+L+CVND   +AL+ RE IG+KQVRHFL
Subjt:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL

Query:  LCKKQGTSHALLPNEKISEEKGRNNWKTWLNKSL
        LCKK+GTSHA LP     +E G+NNWKTWL KSL
Subjt:  LCKKQGTSHALLPNEKISEEKGRNNWKTWLNKSL

XP_038907220.1 uncharacterized protein LOC120092999 [Benincasa hispida]5.4e-6687.84Show/hide
Query:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL
        MLKRS   KAKK I++TK NRFLVSINVLGSTGP+RFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFIL+CVNDE R+AL+PRETIGSKQVRHFL
Subjt:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL

Query:  LCKKQGTSHALLPNEKIS----EEKGRNNWKTWLNKSLSYKIQSHCML
        LCKKQGTSHALLPNEKIS    EEKGRNNWKTWLNKS SY IQSHCML
Subjt:  LCKKQGTSHALLPNEKIS----EEKGRNNWKTWLNKSLSYKIQSHCML

TrEMBL top hitse value%identityAlignment
A0A0A0L707 Uncharacterized protein3.9e-6282.43Show/hide
Query:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL
        MLKRST  K KKV T+TK NRFLVSINV+GSTGP+RFV NEDDLVCE+IKTSLTLYARQARLP LGTNVDNFILFCVNDEKR+AL+PRE+IGSKQVRHFL
Subjt:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL

Query:  LCKKQGTSHALLPNEKIS----EEKGRNNWKTWLNKSLSYKIQSHCML
        LCKKQG+ H+LL NEK+S    EEKGRN+WK WLNKSLSY IQSHCML
Subjt:  LCKKQGTSHALLPNEKIS----EEKGRNNWKTWLNKSLSYKIQSHCML

A0A1S3C4I6 uncharacterized protein LOC1034967951.5e-5881.51Show/hide
Query:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL
        MLKRST NK KKV T+TK NRFLVSINVLGSTGPVRFV NEDDLVCEVIKTSLTLYARQ RLP LGTNVDNF L+ VNDEKR+AL+PRE+IGSKQVRHFL
Subjt:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL

Query:  LCKKQGTSHALLPNEKIS--EEKGRNNWKTWLNKSLSYKIQSHCML
        LCKKQGTSH+LL NEK S   EK + +WK WLNKSL+Y IQSHCML
Subjt:  LCKKQGTSHALLPNEKIS--EEKGRNNWKTWLNKSLSYKIQSHCML

A0A6J1CNZ1 uncharacterized protein LOC1110132141.3e-4173.28Show/hide
Query:  LKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIG-SKQVRHFL
        LKR+T NK+KK ITS K +RFL+SINVLGSTGP+RFVVNEDDLVCEV+KT+L  YARQARLP LGTNVDNFIL+CVND    AL+PRETIG SKQVRHFL
Subjt:  LKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIG-SKQVRHFL

Query:  LCKKQGTSHALLPNE------KISEEKGRNN
        LCKKQGTSHA  PN+      ++ EEK RN+
Subjt:  LCKKQGTSHALLPNE------KISEEKGRNN

A0A6J1G8Y8 uncharacterized protein LOC1114520427.7e-4268.66Show/hide
Query:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL
        MLKRST       + ++K NR LVS+NV+GSTGP+RFV NEDDLVCEV+KT+LT YAR ARLPTLGTNVDNF+L+CVND   +AL+ RE IG+KQVRHFL
Subjt:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL

Query:  LCKKQGTSHALLPNEKISEEKGRNNWKTWLNKSL
        LCKK+GTSHA LP     +E G+NNWKTWL KSL
Subjt:  LCKKQGTSHALLPNEKISEEKGRNNWKTWLNKSL

A0A6J1K9B8 uncharacterized protein LOC1114928582.7e-3965.67Show/hide
Query:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL
        MLKRS        + ++K NR LVS+NV+GSTGP+RFV N+DDLVCEV+KT+LT YAR ARLP LGTNVDNF+L+CVND   +AL+ RE IG+KQVRHFL
Subjt:  MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFL

Query:  LCKKQGTSHALLPNEKISEEKGRNNWKTWLNKSL
        LCKK+GTS A LP     +E G+NNWKTWL KSL
Subjt:  LCKKQGTSHALLPNEKISEEKGRNNWKTWLNKSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23150.1 unknown protein5.0e-2544.14Show/hide
Query:  KKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFLLCKKQGTSHA
        KK     K NR L+S+  LGS GP+RFV NE DLV  VI T+L  YAR+ RLP LG++ ++F+ +C       AL+P E IGS  VR+F+LCKK+     
Subjt:  KKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFLLCKKQGTSHA

Query:  LLPNE-KISEEKGRNN-------------WKTWLNKSLSYKIQSH
          P E K+ E+KGR+N             +K W+NKSL  K+ +H
Subjt:  LLPNE-KISEEKGRNN-------------WKTWLNKSLSYKIQSH

AT1G70780.1 unknown protein1.4e-2242.18Show/hide
Query:  NKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFC--VNDEKRNALNPRETIGSKQVRHFLLCKKQ
        NK KK   + K NR L+S+ VLGS GP+RFV  EDDLV  VI T+L  YAR+ RLP LG++ ++F+L+C  V  E   AL+  + IGS   R+F+LC+K 
Subjt:  NKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFC--VNDEKRNALNPRETIGSKQVRHFLLCKKQ

Query:  GTSHALLPNEKISEEKGRN-----------NWKTWLNKSLSYKIQSH
                 +K+ E  GR+           + K W+NKS + K+ SH
Subjt:  GTSHALLPNEKISEEKGRN-----------NWKTWLNKSLSYKIQSH

AT5G37730.1 unknown protein4.6e-2347.15Show/hide
Query:  NKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFLLCKKQGT
        N+  K +   K+ + LVS+NVLGS GP+RF+ NEDD V   I T+L  YARQ R+P LG +VDNFI + +N    N L+P+E IGS  V +FL+CKK+  
Subjt:  NKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFLLCKKQGT

Query:  SHALLPNEKISEEKGR--NNWKT
           L   E I E + R  + WKT
Subjt:  SHALLPNEKISEEKGR--NNWKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGAGAAGCACACCAAATAAGGCTAAAAAAGTGATTACAAGTACGAAATCTAATAGATTTTTGGTGTCTATCAATGTCCTTGGGAGCACAGGCCCAGTTAGGTT
TGTGGTAAATGAAGATGATTTGGTTTGTGAGGTTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTACTCTTGGAACTAATGTTGATAACTTTATTC
TCTTTTGTGTTAATGATGAAAAAAGGAATGCTCTAAACCCAAGGGAAACTATAGGATCAAAGCAAGTAAGGCACTTTTTGCTATGTAAGAAGCAAGGGACTTCACATGCA
TTATTGCCTAATGAAAAAATCTCAGAAGAAAAGGGGAGAAATAATTGGAAGACATGGCTCAACAAGTCCTTGAGTTACAAAATTCAATCTCATTGCATGCTTTAA
mRNA sequenceShow/hide mRNA sequence
TTACAATTGAACTTCACATATTGGACATGCTCACCATGTCTTTGCAAGGATATATAAGTGGTGGAGACAGTATATATAGTTCTACACCTTCATTTGCTTCCTCCTTCGTC
TCGATAGTGAGTGTGCTTCATCTCGATCAGCATCTCAGCCTCCATCCTCGTCCTTCTCCTCATCCCTATACTAAAGCAAGTTGTTCAAAAACCACATACTAGATAGCAAT
TATCTTAAACCTTGTTTTTCTTTCCCTCCTCTCTAACCCAAAAGGAAAAGAAAAAGTATGTTGAAGAGAAGCACACCAAATAAGGCTAAAAAAGTGATTACAAGTACGAA
ATCTAATAGATTTTTGGTGTCTATCAATGTCCTTGGGAGCACAGGCCCAGTTAGGTTTGTGGTAAATGAAGATGATTTGGTTTGTGAGGTTATCAAGACTTCTCTTACAT
TATATGCTCGTCAAGCTCGTCTTCCTACTCTTGGAACTAATGTTGATAACTTTATTCTCTTTTGTGTTAATGATGAAAAAAGGAATGCTCTAAACCCAAGGGAAACTATA
GGATCAAAGCAAGTAAGGCACTTTTTGCTATGTAAGAAGCAAGGGACTTCACATGCATTATTGCCTAATGAAAAAATCTCAGAAGAAAAGGGGAGAAATAATTGGAAGAC
ATGGCTCAACAAGTCCTTGAGTTACAAAATTCAATCTCATTGCATGCTTTAATTTTTTTTTGGTAATATGGAAGCAAAGATTGATCGATATGTTTTATAAATAACTAAGA
TCAGTTCTTAAGTCCTATTTTTCGTTGTAAAACATGAAGATGTGTATATAATGAATAATTTTTTTTTTGACACAACACTCACTAGTATACATTTAAGATGGCTATTAGTT
TGTCAATCCTAGTATGACCAACCAATGGATAAAGGCACTAATTACTATCTCAAAAGTGGATAATTAATTCTTCACCCGTACAATTATTGAGCTTTGGTTTCATCTAATAT
CTCTTTTGATGAATTATAAGGCTCTATTGTCC
Protein sequenceShow/hide protein sequence
MLKRSTPNKAKKVITSTKSNRFLVSINVLGSTGPVRFVVNEDDLVCEVIKTSLTLYARQARLPTLGTNVDNFILFCVNDEKRNALNPRETIGSKQVRHFLLCKKQGTSHA
LLPNEKISEEKGRNNWKTWLNKSLSYKIQSHCML