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Clc05G14050 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G14050
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:13313468..13313827
RNA-Seq ExpressionClc05G14050
SyntenyClc05G14050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032826.1 hypothetical protein E6C27_scaffold708G00860 [Cucumis melo var. makuwa]1.2e-3465.83Show/hide
Query:  MAARATPSVATIIL-LLLLLIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSE-FLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLG
        MAA +TPS+ TIIL LLL+LI +G TVN+T ASASCN SH +KCHL  +++A+ +  +ME E+GRMLL+FNK+  PQT T NK +  SCGRPPRYDSCLG
Subjt:  MAARATPSVATIIL-LLLLLIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSE-FLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLG

Query:  QKRQTPPQEKCNIYKRVPCG
        +KR TPPQEKC +YKRVPCG
Subjt:  QKRQTPPQEKCNIYKRVPCG

KAA0042447.1 hypothetical protein E6C27_scaffold266G00270 [Cucumis melo var. makuwa]2.5e-1650.44Show/hide
Query:  PSVATIILLLLL-LIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPP
        P++A IIL+LL   I   +TVN TA    C GS  E C L G+E ++SEFLME++  RMLL+F   Q P T  PN+Q+V  CGRPPRYDSC+G+KR    
Subjt:  PSVATIILLLLL-LIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPP

Query:  QEKCNIYKRV-PC
         E C++  R  PC
Subjt:  QEKCNIYKRV-PC

KAG6607065.1 hypothetical protein SDJN03_00407, partial [Cucurbita argyrosperma subsp. sororia]4.3e-1649.58Show/hide
Query:  AARATPSVATIILLLLLLIPTGS--TVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQ
        A   TPS+  + ++LLL  PT S   +N TAA   C+G   E C L G+  ++SEFLME+E  RMLL+FN FQ P T  P+KQ+   C RPPRYD CLGQ
Subjt:  AARATPSVATIILLLLLLIPTGS--TVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQ

Query:  KRQTPPQEKCNIYKRV-PC
        K   P  E C+   RV PC
Subjt:  KRQTPPQEKCNIYKRV-PC

KAG7011063.1 hypothetical protein SDJN02_27861, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-1750.42Show/hide
Query:  AARATPSVATIILLLLLLIPTGS--TVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQ
        A   TPS+  + ++LLL  PT S   +N TAA   C+G   E C L G+  ++SEFLME+E  RMLL+FN FQ P T  P+KQ+   C RPPRYDSCLGQ
Subjt:  AARATPSVATIILLLLLLIPTGS--TVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQ

Query:  KRQTPPQEKCNIYKRV-PC
        K   P  E C+   RV PC
Subjt:  KRQTPPQEKCNIYKRV-PC

KGN57776.1 hypothetical protein Csa_010194 [Cucumis sativus]1.3e-2862.07Show/hide
Query:  MAARATPSVATIILLLLLLIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRML-LNFNKFQGPQTQTPNKQAVA-SCGRPPRYDSCLG
        MAA +TPS+ TII LLLLLIP+G TVN+TAASASCN SH +KCHL  +++ + EF+MESE+G ML +N++K++ P T+  NKQ V   CGRPPRY+SCLG
Subjt:  MAARATPSVATIILLLLLLIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRML-LNFNKFQGPQTQTPNKQAVA-SCGRPPRYDSCLG

Query:  QKRQTPPQEKCNIYKR
        +KR T  QEKC +YKR
Subjt:  QKRQTPPQEKCNIYKR

TrEMBL top hitse value%identityAlignment
A0A0A0KVZ2 Uncharacterized protein5.4e-1750Show/hide
Query:  PSVATIILLLLLLIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPPQ
        P++A +IL LL      +T  N   S  C GS  E C L G+E  +SEFLME+E  RMLL+F   Q P T  PN+Q+VA CGRPPRYDSC G++RQ P  
Subjt:  PSVATIILLLLLLIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPPQ

Query:  EKCNIYKRV-PC
        E C++  R  PC
Subjt:  EKCNIYKRV-PC

A0A0A0LCI8 Uncharacterized protein6.2e-2962.07Show/hide
Query:  MAARATPSVATIILLLLLLIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRML-LNFNKFQGPQTQTPNKQAVA-SCGRPPRYDSCLG
        MAA +TPS+ TII LLLLLIP+G TVN+TAASASCN SH +KCHL  +++ + EF+MESE+G ML +N++K++ P T+  NKQ V   CGRPPRY+SCLG
Subjt:  MAARATPSVATIILLLLLLIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRML-LNFNKFQGPQTQTPNKQAVA-SCGRPPRYDSCLG

Query:  QKRQTPPQEKCNIYKR
        +KR T  QEKC +YKR
Subjt:  QKRQTPPQEKCNIYKR

A0A5D3BS53 Uncharacterized protein1.4e-1242.02Show/hide
Query:  MAARATPSVATIILLLLLL-IPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQ
        M A AT   A ++ ++LLL IP+      T      N +   +  + GEE  + EF+MES I R+L +   FQ   T   NK +   CGRPPRYDSCLGQ
Subjt:  MAARATPSVATIILLLLLL-IPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQ

Query:  KRQTPPQEKCNIYKRV-PC
        KR  PP   C  Y R  PC
Subjt:  KRQTPPQEKCNIYKRV-PC

A0A5D3BZL1 Uncharacterized protein1.2e-1650.44Show/hide
Query:  PSVATIILLLLL-LIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPP
        P++A IIL+LL   I   +TVN TA    C GS  E C L G+E ++SEFLME++  RMLL+F   Q P T  PN+Q+V  CGRPPRYDSC+G+KR    
Subjt:  PSVATIILLLLL-LIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPP

Query:  QEKCNIYKRV-PC
         E C++  R  PC
Subjt:  QEKCNIYKRV-PC

A0A5D3E3B8 Uncharacterized protein5.8e-3565.83Show/hide
Query:  MAARATPSVATIIL-LLLLLIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSE-FLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLG
        MAA +TPS+ TIIL LLL+LI +G TVN+T ASASCN SH +KCHL  +++A+ +  +ME E+GRMLL+FNK+  PQT T NK +  SCGRPPRYDSCLG
Subjt:  MAARATPSVATIIL-LLLLLIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSE-FLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLG

Query:  QKRQTPPQEKCNIYKRVPCG
        +KR TPPQEKC +YKRVPCG
Subjt:  QKRQTPPQEKCNIYKRVPCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCACGGGCCACACCATCAGTGGCAACCATCATTCTTCTTCTCCTCCTCCTCATTCCTACCGGCTCCACCGTCAACAACACCGCTGCCTCCGCCTCCTGC
AACGGCAGCCACAGGGAGAAATGCCACCTCAGCGGAGAAGAGATCGCCAATTCCGAATTCTTGATGGAATCGGAGATCGGACGGATGCTGTTGAACTTCAATAAA
TTCCAAGGTCCCCAAACCCAAACCCCCAACAAACAGGCGGTGGCGTCCTGTGGCCGACCACCGCGGTACGACAGTTGTCTGGGCCAGAAGAGGCAAACGCCGCCA
CAGGAAAAATGCAACATCTACAAACGAGTGCCTTGTGGACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCACGGGCCACACCATCAGTGGCAACCATCATTCTTCTTCTCCTCCTCCTCATTCCTACCGGCTCCACCGTCAACAACACCGCTGCCTCCGCCTCCTGC
AACGGCAGCCACAGGGAGAAATGCCACCTCAGCGGAGAAGAGATCGCCAATTCCGAATTCTTGATGGAATCGGAGATCGGACGGATGCTGTTGAACTTCAATAAA
TTCCAAGGTCCCCAAACCCAAACCCCCAACAAACAGGCGGTGGCGTCCTGTGGCCGACCACCGCGGTACGACAGTTGTCTGGGCCAGAAGAGGCAAACGCCGCCA
CAGGAAAAATGCAACATCTACAAACGAGTGCCTTGTGGACAATGA
Protein sequenceShow/hide protein sequence
MAARATPSVATIILLLLLLIPTGSTVNNTAASASCNGSHREKCHLSGEEIANSEFLMESEIGRMLLNFNKFQGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPP
QEKCNIYKRVPCGQ