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Clc05G14060 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G14060
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:13362804..13364513
RNA-Seq ExpressionClc05G14060
SyntenyClc05G14060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607029.1 hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4783.9Show/hide
Query:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MAAAA++IP A+ IMILLLNPT  DALTSFKP LNNDTS AGKYL+GDQD++SEFLMESHI+RILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQK
Subjt:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTFNRVNPC
         NNPPPENCGTFNR NPC
Subjt:  RNNPPPENCGTFNRVNPC

TYK01622.1 hypothetical protein E5676_scaffold451G002320 [Cucumis melo var. makuwa]2.0e-4274.79Show/hide
Query:  MAAAALMIPTAVTIMILLLN-PTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ
        M A+A MIP AV  MILLLN P+ C+ALT+F+PLL+N TS   + +VG++DM+ EF+MESHI+RILASSQNFQTTST DANKASGGGCGRPPRYDSCLGQ
Subjt:  MAAAALMIPTAVTIMILLLN-PTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ

Query:  KRNNPPPENCGTFNRVNPC
        KRNNPPP NCGT+NR NPC
Subjt:  KRNNPPPENCGTFNRVNPC

XP_022948338.1 uncharacterized protein LOC111452044 [Cucurbita moschata]2.1e-4783.9Show/hide
Query:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MAAAA++IP A+ IMILLLNPT  DALTSFKP LNNDTS AGKYL+GDQD++SEFLMESHI+RILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQK
Subjt:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTFNRVNPC
         NNPPPENCGTFNR NPC
Subjt:  RNNPPPENCGTFNRVNPC

XP_022998105.1 uncharacterized protein LOC111492854 [Cucurbita maxima]3.9e-4682.2Show/hide
Query:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MAAAA+MIP A+ IMILLLNPT  DALT+FKP LNNDTS AGKYL+GDQD++SEFLMESHI+RILA SQ+FQT+ T DANKASGGGC RPPRYDSCLGQK
Subjt:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTFNRVNPC
         NNPPPENCGTFNR NPC
Subjt:  RNNPPPENCGTFNRVNPC

XP_023523220.1 uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]1.0e-4683.05Show/hide
Query:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MA AA MIP A+ IMILLLNP   DALTSFKP LNNDTS AGKYL+GDQD++SEFLMESHI+RILA SQNFQT++T DANKASGGGCGRPPRYDSCLGQK
Subjt:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTFNRVNPC
         NNPPPENCGTFNR NPC
Subjt:  RNNPPPENCGTFNRVNPC

TrEMBL top hitse value%identityAlignment
A0A0A0LCJ4 Uncharacterized protein3.5e-4071.43Show/hide
Query:  MAAAALMIPTAVTIMILLLN-PTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ
        M A+ALMIP AV  MILLL+ P+ CDALT+F+PLL+N +S  GK ++G++DME EFLMESHI+RILASS+N+QT STT+ANKASGGGC RPPRYDSCLG+
Subjt:  MAAAALMIPTAVTIMILLLN-PTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ

Query:  KRNNPPPENCGTFNRVNPC
        KRNNPPP NC  +NR NPC
Subjt:  KRNNPPPENCGTFNRVNPC

A0A5D3BS53 Uncharacterized protein9.8e-4374.79Show/hide
Query:  MAAAALMIPTAVTIMILLLN-PTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ
        M A+A MIP AV  MILLLN P+ C+ALT+F+PLL+N TS   + +VG++DM+ EF+MESHI+RILASSQNFQTTST DANKASGGGCGRPPRYDSCLGQ
Subjt:  MAAAALMIPTAVTIMILLLN-PTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ

Query:  KRNNPPPENCGTFNRVNPC
        KRNNPPP NCGT+NR NPC
Subjt:  KRNNPPPENCGTFNRVNPC

A0A6J1CP71 uncharacterized protein LOC1110132783.5e-3263.56Show/hide
Query:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MA AA+MIPT + + ILL NP  CDALT+ K LLNN+T    K L+GD+D+ SEFLME H++RILA S  FQT +T +AN  S   C RPPRYDSCLG+K
Subjt:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTFNRVNPC
        RN PP ENCGTFNR NPC
Subjt:  RNNPPPENCGTFNRVNPC

A0A6J1G927 uncharacterized protein LOC1114520441.0e-4783.9Show/hide
Query:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MAAAA++IP A+ IMILLLNPT  DALTSFKP LNNDTS AGKYL+GDQD++SEFLMESHI+RILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQK
Subjt:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTFNRVNPC
         NNPPPENCGTFNR NPC
Subjt:  RNNPPPENCGTFNRVNPC

A0A6J1KBP5 uncharacterized protein LOC1114928541.9e-4682.2Show/hide
Query:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MAAAA+MIP A+ IMILLLNPT  DALT+FKP LNNDTS AGKYL+GDQD++SEFLMESHI+RILA SQ+FQT+ T DANKASGGGC RPPRYDSCLGQK
Subjt:  MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTFNRVNPC
         NNPPPENCGTFNR NPC
Subjt:  RNNPPPENCGTFNRVNPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGCGGCGCTGATGATACCCACCGCTGTGACAATAATGATTCTGCTGCTGAATCCAACCGGTTGCGATGCTCTTACATCTTTCAAACCACTTCTCAACAACGA
CACTTCTCGTGCCGGAAAATACCTCGTCGGCGACCAAGATATGGAATCGGAGTTTCTGATGGAGTCCCACATCACCCGGATCTTAGCGTCCTCCCAAAACTTCCAAACCA
CCTCCACTACCGACGCTAACAAAGCTTCTGGCGGTGGTTGCGGCCGGCCGCCGCGATACGACAGTTGTCTCGGCCAGAAAAGAAATAACCCGCCGCCGGAAAACTGTGGC
ACCTTCAATCGCGTAAATCCCTGTTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAACATTATTTATAGACATTATAAATTAAGGTGATCTCCAAACACAAAATGCACATATTTTTGGTTTTCCTATTTCCGAAATCCCAATCGTATTCCTCCGCCGCCCG
TCGCCTGCAATGGCTGCAGCGGCGCTGATGATACCCACCGCTGTGACAATAATGATTCTGCTGCTGAATCCAACCGGTTGCGATGCTCTTACATCTTTCAAACCACTTCT
CAACAACGACACTTCTCGTGCCGGAAAATACCTCGTCGGCGACCAAGATATGGAATCGGAGTTTCTGATGGAGTCCCACATCACCCGGATCTTAGCGTCCTCCCAAAACT
TCCAAACCACCTCCACTACCGACGCTAACAAAGCTTCTGGCGGTGGTTGCGGCCGGCCGCCGCGATACGACAGTTGTCTCGGCCAGAAAAGAAATAACCCGCCGCCGGAA
AACTGTGGCACCTTCAATCGCGTAAATCCCTGTTAGAAAAATTACACCAAAATATCATCCATATTTACAGCTTCTCTATTGAGTCTTTACCATTTATATAATTTCTTCAG
TCCAATCTTCACCCTTAATAAAGTTTAATAAAAAGTTTGTTGGCGAAAATATTGATAAAA
Protein sequenceShow/hide protein sequence
MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCG
TFNRVNPC