; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G14210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G14210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationClcChr05:13984572..13988186
RNA-Seq ExpressionClc05G14210
SyntenyClc05G14210
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063383.1 uncharacterized protein E6C27_scaffold508G00110 [Cucumis melo var. makuwa]4.0e-9798.92Show/hide
Query:  RRSSVDLPVSKMNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFF
        RRSSVDLPVSKMNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQ EVCDSKAGADLLDIILKKGSEQSSAHVASSPPFF
Subjt:  RRSSVDLPVSKMNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFF

Query:  SGSPPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        SGSPPSRASNPLIQDARFGDEKLSPMPALP YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  SGSPPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

KAG6581179.1 hypothetical protein SDJN03_21181, partial [Cucurbita argyrosperma subsp. sororia]1.1e-9189.74Show/hide
Query:  AFLISSLGSFRRSSVDLPVSKMNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSS
        ++L   LGSFRRSSVDLPVSKMNH+IV+QNTFIS EET+GFASISDLKDP+VCPKPRRLAILANNHIKQPLRWHQ E CDSKAGADLLDIILKKGSEQSS
Subjt:  AFLISSLGSFRRSSVDLPVSKMNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSS

Query:  AHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        +HVASSPP+FSGSPPSRASNPLIQDARFGDE++SPM ALP YSPSGLSSPSSASS  KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  AHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

XP_008461589.1 PREDICTED: uncharacterized protein LOC103500158 [Cucumis melo]1.2e-9098.28Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP
        MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQ EVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP

Query:  LIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        LIQDARFGDEKLSPMP LP YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  LIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

XP_011651371.1 uncharacterized protein LOC101218020 [Cucumis sativus]7.3e-9198.28Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP
        MNHFIVQQNTF+SCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQ EVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP

Query:  LIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        LIQDARFGDEKLSPMPALP YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  LIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

XP_038897455.1 uncharacterized protein LOC120085511 [Benincasa hispida]4.0e-8997.13Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP
        MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRW QAEVCDSKAGADLLDIILKKGSEQ S HVASSPPFFSGSPPSRASNP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP

Query:  LIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        LIQDARFGDEKLSPMPALP YSPSGLSSPSSASS HKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  LIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

TrEMBL top hitse value%identityAlignment
A0A0A0L9U7 Uncharacterized protein3.5e-9198.28Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP
        MNHFIVQQNTF+SCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQ EVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP

Query:  LIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        LIQDARFGDEKLSPMPALP YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  LIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

A0A1S3CF27 uncharacterized protein LOC1035001586.0e-9198.28Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP
        MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQ EVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP

Query:  LIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        LIQDARFGDEKLSPMP LP YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  LIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

A0A5A7V5L2 Uncharacterized protein1.9e-9798.92Show/hide
Query:  RRSSVDLPVSKMNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFF
        RRSSVDLPVSKMNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQ EVCDSKAGADLLDIILKKGSEQSSAHVASSPPFF
Subjt:  RRSSVDLPVSKMNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFF

Query:  SGSPPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        SGSPPSRASNPLIQDARFGDEKLSPMPALP YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  SGSPPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

A0A5D3DD63 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-8390Show/hide
Query:  MEVHSLDVKKDIFRPRDNNEELLGPEVPYLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFDLVGYADS
        M V SLDVKKDIFRPR++NEELLGPEVPYLSAIGALMYLANNTRP+IAFSVNLLARYS SPTKRHWNG+KH+LRYLRGTID+GLFYSNKSNFDLVGYAD+
Subjt:  MEVHSLDVKKDIFRPRDNNEELLGPEVPYLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFDLVGYADS

Query:  GYLSDPHKARSQTGYLFTCGGTVISWRLVKQTITATSSNHAEILAIHEASRECVWLRSMTQHIRETCGLS
        G+LSDPHKARSQTGYLFTC GT ISWR VKQT+TATSSNHAEILAIHEASRECVWLRSMT +IRETCGLS
Subjt:  GYLSDPHKARSQTGYLFTCGGTVISWRLVKQTITATSSNHAEILAIHEASRECVWLRSMTQHIRETCGLS

A0A6J1D4M2 uncharacterized protein LOC1110169203.1e-8794.92Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP
        MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQ EVCDSKAGADLLDIILKKGSEQSS HVASSPPF+SGSPPSRASNP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNP

Query:  LIQDARFGDEKLSPMPALPP-YSPSGLSSPS--SASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        LIQDARFGDEKLS MPALPP YSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  LIQDARFGDEKLSPMPALPP-YSPSGLSSPS--SASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

SwissProt top hitse value%identityAlignment
P04146 Copia protein7.5e-2238.46Show/hide
Query:  PRDNNEELLGPE----VPYLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFD--LVGYADSGYLSDPHK
        P   N ELL  +     P  S IG LMY+   TRP++  +VN+L+RYSS      W  +K +LRYL+GTID+ L +     F+  ++GY DS +      
Subjt:  PRDNNEELLGPE----VPYLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFD--LVGYADSGYLSDPHK

Query:  ARSQTGYLFTC-GGTVISWRLVKQTITATSSNHAEILAIHEASRECVWLRSMTQHI
         +S TGYLF      +I W   +Q   A SS  AE +A+ EA RE +WL+ +   I
Subjt:  ARSQTGYLFTC-GGTVISWRLVKQTITATSSNHAEILAIHEASRECVWLRSMTQHI

P0CV72 Secreted RxLR effector protein 1614.5e-2742.75Show/hide
Query:  VPYLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFDLVGYADSGYLSDPHKARSQTGYLFTCGGTVISW
        VPYLSA+GA+MYL   TRP++A +V +L++++S P   HW  +K +LRYL+ T   GL ++      LVGY+D+ +  D    RS +GYLF   G  +SW
Subjt:  VPYLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFDLVGYADSGYLSDPHKARSQTGYLFTCGGTVISW

Query:  RLVKQTITATSSNHAEILAIHEASRECVWLRSMTQHIR
        R  KQ   A SS   E +A+ EA++E VWL   T+  +
Subjt:  RLVKQTITATSSNHAEILAIHEASRECVWLRSMTQHIR

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.0e-2342.03Show/hide
Query:  EVPYLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFDLVGYADSGYLSDPHKARSQTGYLFTCGGTVIS
        +VPY SA+G+LMY    TRP+IA +V +++R+  +P K HW  +K ILRYLRGT    L +   S+  L GY D+    D    +S TGYLFT  G  IS
Subjt:  EVPYLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFDLVGYADSGYLSDPHKARSQTGYLFTCGGTVIS

Query:  WRLVKQTITATSSNHAEILAIHEASRECVWLRSMTQHI
        W+   Q   A S+  AE +A  E  +E +WL+   Q +
Subjt:  WRLVKQTITATSSNHAEILAIHEASRECVWLRSMTQHI

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.7e-1630.81Show/hide
Query:  YLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFDLVGYADSGYLSDPHKARSQTGYLFTCGGTVISWRL
        Y   +G+L YLA  TRP+I+++VN L+++   PT+ H   +K ILRYL GT + G+F    +   L  Y+D+ +  D     S  GY+   G   ISW  
Subjt:  YLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFDLVGYADSGYLSDPHKARSQTGYLFTCGGTVISWRL

Query:  VKQTITATSSNHAEILAIHEASRECVWLRSMTQHIRETCGLSSTPAFLISSLGSFRRSSVDLPVSKMNHFIV
         KQ     SS  AE  ++   S E  W+ S+   +     L+  P     ++G+    +  +  S+M H  +
Subjt:  VKQTITATSSNHAEILAIHEASRECVWLRSMTQHIRETCGLSSTPAFLISSLGSFRRSSVDLPVSKMNHFIV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.3e-1833.14Show/hide
Query:  YLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFDLVGYADSGYLSDPHKARSQTGYLFTCGGTVISWRL
        Y   +G+L YLA  TRP+++++VN L++Y   PT  HWN +K +LRYL GT D G+F    +   L  Y+D+ +  D     S  GY+   G   ISW  
Subjt:  YLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFDLVGYADSGYLSDPHKARSQTGYLFTCGGTVISWRL

Query:  VKQTITATSSNHAEILAIHEASRECVWLRSMTQHIRETCGLSSTPAFLISSLGSFRRSSVDLPVSKMNH
         KQ     SS  AE  ++   S E  W+ S+   +     LS  P     ++G+    +  +  S+M H
Subjt:  VKQTITATSSNHAEILAIHEASRECVWLRSMTQHIRETCGLSSTPAFLISSLGSFRRSSVDLPVSKMNH

Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein1.8e-2645.51Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRW---HQAEVCDSKAGADLLDIILKK----GSEQSSAHVASSPP-FFSGS
        MN   +QQN F   EE R  A++SD +D V+CPKPRR+  L N+H  + LRW   HQ E+C+S +G+++LD IL K    G EQ       +PP FF+GS
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRW---HQAEVCDSKAGADLLDIILKK----GSEQSSAHVASSPP-FFSGS

Query:  PPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS
        PPSR SNPL +D+ F +E L  M A P  S    + P   SS  + G C  A   FG  P  VRV GFDC   DR++S
Subjt:  PPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS

AT1G13390.2 unknown protein1.8e-2645.51Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRW---HQAEVCDSKAGADLLDIILKK----GSEQSSAHVASSPP-FFSGS
        MN   +QQN F   EE R  A++SD +D V+CPKPRR+  L N+H  + LRW   HQ E+C+S +G+++LD IL K    G EQ       +PP FF+GS
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRW---HQAEVCDSKAGADLLDIILKK----GSEQSSAHVASSPP-FFSGS

Query:  PPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS
        PPSR SNPL +D+ F +E L  M A P  S    + P   SS  + G C  A   FG  P  VRV GFDC   DR++S
Subjt:  PPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS

AT1G68490.1 unknown protein2.6e-3349.73Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDL---KDPVVCPKPRRLAILAN-NHIKQPLRW---HQAEVCDSKAGADLLDIILKK---GSEQSSAHVASSP-PFF
        MNHF VQ N F +  + R  +S+S +   +  VVCPKPRR+ +  N +H  + LR    HQ E+C+SKA  D+LDIIL K   G+EQ +  V  SP PF 
Subjt:  MNHFIVQQNTFISCEETRGFASISDL---KDPVVCPKPRRLAILAN-NHIKQPLRW---HQAEVCDSKAGADLLDIILKK---GSEQSSAHVASSP-PFF

Query:  SGSPPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
         GSPPSR +NPL QDARF DE +S    +PP      SS  S+SS  KGG   R  FG  P  VRVEGFDCL RD +N  IPA+A
Subjt:  SGSPPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

AT3G02555.1 unknown protein3.9e-4257.46Show/hide
Query:  MNHFIVQQNTFISCEETRGFASI-SDLKDPVVCPKPRRLAILANNHIKQPLRWHQA-----EVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPP
        MNH  +QQN F+S EE+RGF  I S   D VVCPKPRR    ANN I+ P R H +     +VCDSKAG DLLDI  +K S  S      SPPFF GSPP
Subjt:  MNHFIVQQNTFISCEETRGFASI-SDLKDPVVCPKPRRLAILANNHIKQPLRWHQA-----EVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPP

Query:  SRASNPLIQDARFGDEKLSPM-PALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        SRA+NPL QDARFGDEKL+ + P+L P  P         S++    GC RMKFG+KPA VRVEGFDCL+RDR NS IPA+A
Subjt:  SRASNPLIQDARFGDEKLSPM-PALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

AT5G16110.1 unknown protein4.6e-5155.3Show/hide
Query:  STPAFLISSLGSFRRSSV----------DLPVSKMNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQ----AEVCDSKA
        S   FL+SS  SF  S +             V KMNH  +QQN F+S EE  GF    D KD VVCPKPRR+ +LANN I+ PLR H     A++CDSKA
Subjt:  STPAFLISSLGSFRRSSV----------DLPVSKMNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQ----AEVCDSKA

Query:  GADLLDIILKKGSEQSSAH-VASSPPFFSGSPPSRASNPLIQDARFGDEKLSPM----PALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEG
        GA+LL+II +K    +    ++SSPP+F GSPPSRA+NPL QDARF DEKL+P+    P L PYS +G  SPSS+SS+    GC RMKFGL   AVRVEG
Subjt:  GADLLDIILKKGSEQSSAH-VASSPPFFSGSPPSRASNPLIQDARFGDEKLSPM----PALPPYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEG

Query:  FDCLSRDRQNSRIPAVA
        FDCL+RDRQNS IPA+A
Subjt:  FDCLSRDRQNSRIPAVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTCATTCACTAGATGTGAAGAAAGATATATTTCGACCTCGAGATAATAATGAAGAACTTCTTGGTCCTGAAGTACCATATCTTAGTGCGATTGGTGCACTTAT
GTATCTTGCTAATAATACAAGACCAAATATTGCATTTTCAGTAAATTTATTAGCTAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAATTAAGCATATACTCC
GTTATCTTCGAGGAACGATTGATGTGGGTTTGTTTTATTCAAATAAATCAAATTTTGACTTAGTTGGTTATGCAGATTCTGGATATTTATCTGATCCACATAAAGCTAGA
TCTCAAACAGGTTATTTATTCACTTGTGGAGGAACTGTTATATCTTGGCGATTAGTGAAACAGACCATAACAGCTACTTCCTCAAATCATGCTGAAATTCTTGCAATCCA
TGAAGCTAGTAGAGAATGTGTATGGCTAAGATCAATGACTCAACACATTCGAGAAACATGTGGCTTGTCTTCTACTCCAGCTTTTCTTATCTCTTCCTTGGGTTCCTTCA
GGCGTTCTTCTGTGGATCTGCCAGTTTCAAAGATGAATCATTTTATTGTTCAGCAGAACACCTTTATTTCATGTGAAGAGACGAGAGGCTTTGCTTCAATCTCTGATCTG
AAGGACCCAGTTGTCTGTCCGAAGCCCAGGCGACTTGCTATTCTTGCTAACAATCACATTAAACAGCCCTTGAGATGGCACCAAGCTGAGGTTTGTGATTCAAAAGCTGG
GGCAGATCTTCTTGACATCATTTTAAAGAAGGGGTCGGAACAATCCAGTGCTCACGTGGCTTCGTCACCCCCATTTTTTAGTGGGTCTCCGCCGAGCCGGGCTTCGAACC
CATTAATCCAGGATGCCCGGTTTGGGGATGAGAAACTCAGTCCTATGCCAGCATTGCCTCCATATTCCCCATCGGGTCTCTCATCCCCATCCTCGGCATCGTCGGCGCAC
AAAGGAGGAGGGTGTGCGAGGATGAAGTTCGGTCTAAAACCGGCAGCAGTTAGAGTAGAAGGATTTGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGT
TGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTCATTCACTAGATGTGAAGAAAGATATATTTCGACCTCGAGATAATAATGAAGAACTTCTTGGTCCTGAAGTACCATATCTTAGTGCGATTGGTGCACTTAT
GTATCTTGCTAATAATACAAGACCAAATATTGCATTTTCAGTAAATTTATTAGCTAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAATTAAGCATATACTCC
GTTATCTTCGAGGAACGATTGATGTGGGTTTGTTTTATTCAAATAAATCAAATTTTGACTTAGTTGGTTATGCAGATTCTGGATATTTATCTGATCCACATAAAGCTAGA
TCTCAAACAGGTTATTTATTCACTTGTGGAGGAACTGTTATATCTTGGCGATTAGTGAAACAGACCATAACAGCTACTTCCTCAAATCATGCTGAAATTCTTGCAATCCA
TGAAGCTAGTAGAGAATGTGTATGGCTAAGATCAATGACTCAACACATTCGAGAAACATGTGGCTTGTCTTCTACTCCAGCTTTTCTTATCTCTTCCTTGGGTTCCTTCA
GGCGTTCTTCTGTGGATCTGCCAGTTTCAAAGATGAATCATTTTATTGTTCAGCAGAACACCTTTATTTCATGTGAAGAGACGAGAGGCTTTGCTTCAATCTCTGATCTG
AAGGACCCAGTTGTCTGTCCGAAGCCCAGGCGACTTGCTATTCTTGCTAACAATCACATTAAACAGCCCTTGAGATGGCACCAAGCTGAGGTTTGTGATTCAAAAGCTGG
GGCAGATCTTCTTGACATCATTTTAAAGAAGGGGTCGGAACAATCCAGTGCTCACGTGGCTTCGTCACCCCCATTTTTTAGTGGGTCTCCGCCGAGCCGGGCTTCGAACC
CATTAATCCAGGATGCCCGGTTTGGGGATGAGAAACTCAGTCCTATGCCAGCATTGCCTCCATATTCCCCATCGGGTCTCTCATCCCCATCCTCGGCATCGTCGGCGCAC
AAAGGAGGAGGGTGTGCGAGGATGAAGTTCGGTCTAAAACCGGCAGCAGTTAGAGTAGAAGGATTTGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGT
TGCTTAA
Protein sequenceShow/hide protein sequence
MEVHSLDVKKDIFRPRDNNEELLGPEVPYLSAIGALMYLANNTRPNIAFSVNLLARYSSSPTKRHWNGIKHILRYLRGTIDVGLFYSNKSNFDLVGYADSGYLSDPHKAR
SQTGYLFTCGGTVISWRLVKQTITATSSNHAEILAIHEASRECVWLRSMTQHIRETCGLSSTPAFLISSLGSFRRSSVDLPVSKMNHFIVQQNTFISCEETRGFASISDL
KDPVVCPKPRRLAILANNHIKQPLRWHQAEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPPYSPSGLSSPSSASSAH
KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA