; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G14780 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G14780
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLipid transfer-like protein
Genome locationClcChr05:15306393..15310434
RNA-Seq ExpressionClc05G14780
SyntenyClc05G14780
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
IPR043325 - Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048555.1 lipid transfer-like protein VAS [Cucumis melo var. makuwa]9.2e-4372.58Show/hide
Query:  MERSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH
        M++   AA  V+++L CG ++G ++QN+ TSCVN LVPCLNY+NGTR+PPESCC+PLRSII+SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCG+H
Subjt:  MERSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH

Query:  VNPLSCLTPNN-AGLPSMSSTLQV
        VNPLSCL  NN +GL S+S TLQV
Subjt:  VNPLSCLTPNN-AGLPSMSSTLQV

XP_004145619.1 lipid transfer-like protein VAS [Cucumis sativus]2.4e-4372.95Show/hide
Query:  RSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVN
        +  +AA  V+++L CG ++G ++Q++DTSCVN L+PCLNY+NGTR+PPESCCNPLRSII+SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCG+HVN
Subjt:  RSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVN

Query:  PLSCLTPNN-AGLPSMSSTLQV
        PLSCL  NN +G PSMS  LQV
Subjt:  PLSCLTPNN-AGLPSMSSTLQV

XP_008449981.1 PREDICTED: lipid transfer-like protein VAS [Cucumis melo]9.2e-4372.58Show/hide
Query:  MERSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH
        M++   AA  V+++L CG ++G ++QN+ TSCVN LVPCLNY+NGTR+PPESCC+PLRSII+SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCG+H
Subjt:  MERSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH

Query:  VNPLSCLTPNN-AGLPSMSSTLQV
        VNPLSCL  NN +GL S+S TLQV
Subjt:  VNPLSCLTPNN-AGLPSMSSTLQV

XP_022935175.1 lipid transfer-like protein VAS [Cucurbita moschata]9.9e-3768.85Show/hide
Query:  AVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCL-TP
        A++LVLA  A     + QDTSC+NRL+PCLNYLNGTR+PP SCCNPL+S+IDSNPDCLC LISR+GS+RAE AGID++QAQLLP RCG+HVNPLSCL   
Subjt:  AVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCL-TP

Query:  NNAGLPSMSSTLQ-VEVTDTDS
        NNA   S+SSTLQ + +T T S
Subjt:  NNAGLPSMSSTLQ-VEVTDTDS

XP_038901700.1 non-specific lipid transfer protein GPI-anchored 30 [Benincasa hispida]2.9e-5287.5Show/hide
Query:  RSAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNP
        RSAMA M V+L +   ATMG++QNQDTSCVNRL+PCLNYLNGT +PPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCG+HVNP
Subjt:  RSAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNP

Query:  LSCLTPNNAGLPSMSSTLQV
        LSCLT NNAGLPSMSSTLQV
Subjt:  LSCLTPNNAGLPSMSSTLQV

TrEMBL top hitse value%identityAlignment
A0A0A0L9L7 AAI domain-containing protein1.2e-4372.95Show/hide
Query:  RSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVN
        +  +AA  V+++L CG ++G ++Q++DTSCVN L+PCLNY+NGTR+PPESCCNPLRSII+SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCG+HVN
Subjt:  RSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVN

Query:  PLSCLTPNN-AGLPSMSSTLQV
        PLSCL  NN +G PSMS  LQV
Subjt:  PLSCLTPNN-AGLPSMSSTLQV

A0A1S3BMN1 lipid transfer-like protein VAS4.5e-4372.58Show/hide
Query:  MERSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH
        M++   AA  V+++L CG ++G ++QN+ TSCVN LVPCLNY+NGTR+PPESCC+PLRSII+SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCG+H
Subjt:  MERSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH

Query:  VNPLSCLTPNN-AGLPSMSSTLQV
        VNPLSCL  NN +GL S+S TLQV
Subjt:  VNPLSCLTPNN-AGLPSMSSTLQV

A0A5A7U4K4 Lipid transfer-like protein VAS4.5e-4372.58Show/hide
Query:  MERSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH
        M++   AA  V+++L CG ++G ++QN+ TSCVN LVPCLNY+NGTR+PPESCC+PLRSII+SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCG+H
Subjt:  MERSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH

Query:  VNPLSCLTPNN-AGLPSMSSTLQV
        VNPLSCL  NN +GL S+S TLQV
Subjt:  VNPLSCLTPNN-AGLPSMSSTLQV

A0A6J1F9V7 lipid transfer-like protein VAS4.8e-3768.85Show/hide
Query:  AVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCL-TP
        A++LVLA  A     + QDTSC+NRL+PCLNYLNGTR+PP SCCNPL+S+IDSNPDCLC LISR+GS+RAE AGID++QAQLLP RCG+HVNPLSCL   
Subjt:  AVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCL-TP

Query:  NNAGLPSMSSTLQ-VEVTDTDS
        NNA   S+SSTLQ + +T T S
Subjt:  NNAGLPSMSSTLQ-VEVTDTDS

A0A6J1J1M2 lipid transfer-like protein VAS1.8e-3668.03Show/hide
Query:  AVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCL-TP
        A++LVLA  A    ++ QDTSC+NRL+PCLNYLNGTR+PP SCCNPL+S+IDSNPDCLC LISR+GS+RAE AGID++QAQLLP RCG+HVNPLSCL   
Subjt:  AVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCL-TP

Query:  NNAGLPSMSSTLQ-VEVTDTDS
        NNA   S+SS LQ + +T T S
Subjt:  NNAGLPSMSSTLQ-VEVTDTDS

SwissProt top hitse value%identityAlignment
Q1PFD8 Non-specific lipid transfer protein GPI-anchored 92.9e-0734.74Show/hide
Query:  MAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTR-NPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNP
        +AVV++ +  AT      Q T+C+ +L+PC  Y++     PP SCC P++ I++ +  CLC  I+       +A  +    A LLP  CG  VNP
Subjt:  MAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTR-NPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNP

Q7EB72 Non-specific lipid transfer protein GPI-anchored 157.9e-0528.65Show/hide
Query:  AVVLVLACGATMGISQNQ-DTSCVNRLV---PCLNYLNG-TRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDIN--QAQLLPARCGQHVNP
        A+  V    A   +++ Q  +SCV+ L    PCL+Y+ G +  P + CC+ L S+I S+P C+C  ++    N     G++IN  QA  LP  C     P
Subjt:  AVVLVLACGATMGISQNQ-DTSCVNRLV---PCLNYLNG-TRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDIN--QAQLLPARCGQHVNP

Query:  L---SCLTPNNAGLPSMSSTLQV-EVTDTDSSSDLEQGEVNLEYLSNEEKLVPEILRSESETNLASLAGRFCLTNLVSLATLAAL
        L   +  T   A  P+ S T +  +VT T +S    +  V         K VP +    S  N+  L   F +  ++ + T + L
Subjt:  L---SCLTPNNAGLPSMSSTLQV-EVTDTDSSSDLEQGEVNLEYLSNEEKLVPEILRSESETNLASLAGRFCLTNLVSLATLAAL

Q9FFY3 Non-specific lipid transfer protein GPI-anchored 303.5e-2949.24Show/hide
Query:  MMERSAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH
        MM     +   V+L++A  + M I+  Q  SC+N+L PCLNYLNGT+  P+ CCNPL+S+I +NP+CLC +IS   S++AE AGID+N AQ+LPARCG+H
Subjt:  MMERSAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH

Query:  VNPLSCLTPNNAGLPSMSSTLQVEVTDTDSSS
        VNP++CLT +  G  S +S     + +T S S
Subjt:  VNPLSCLTPNNAGLPSMSSTLQVEVTDTDSSS

Q9LE56 Non-specific lipid transfer protein GPI-anchored 34.6e-0529.25Show/hide
Query:  CVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLTPNNAGLPSMSSTLQVEVTDTDSS
        C+ +L+PC  YL+    PP +CC PL  I+  +  CLC + +    +  ++  +    A  LP  CG   +   C T  +AG  S S+      T   SS
Subjt:  CVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLTPNNAGLPSMSSTLQVEVTDTDSS

Query:  SDLEQG
        +    G
Subjt:  SDLEQG

Q9LJ86 Non-specific lipid transfer protein GPI-anchored 53.7e-1032.86Show/hide
Query:  VLVLACGATMGISQNQDTSCVNRLVPCLNYLNG-TRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQL--LPARCGQHVNPLS-CLT
        V +    +TM  +Q+  T+ +  + PCLNY+ G + +P + CCN L  ++ S+PDCLC +++  GS      GI++NQ Q   LP  C     P+S C T
Subjt:  VLVLACGATMGISQNQDTSCVNRLVPCLNYLNG-TRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQL--LPARCGQHVNPLS-CLT

Query:  ---------------PNNAGLPSMSSTLQVEVTDTDSSSD
                       PN++G  + S T+ V   D   SSD
Subjt:  ---------------PNNAGLPSMSSTLQVEVTDTDSSSD

Arabidopsis top hitse value%identityAlignment
AT1G03103.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein9.6e-0629.47Show/hide
Query:  AMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLN-GTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQ--AQLLPARCG-QHV
        A+ A+ +   L  GAT   +  +DT  +  L PCL YLN G+ +P  SCC    +++ S+P+CLC +++   SN +   G   N+  A  LP  C  Q  
Subjt:  AMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLN-GTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQ--AQLLPARCG-QHV

Query:  NPLSCLTPNN------AGLPSMSSTLQVEVTDTDSSSDLEQGEVNLEYLSNEEKLVPEILRSESETNLASLAGRFCLTNLVSLATLAALV
        +P  C T  N      A  P  S       + T S ++   G      LSNE         S S++N+  L       + VS+A + A++
Subjt:  NPLSCLTPNN------AGLPSMSSTLQVEVTDTDSSSDLEQGEVNLEYLSNEEKLVPEILRSESETNLASLAGRFCLTNLVSLATLAALV

AT1G70250.1 receptor serine/threonine kinase, putative5.1e-0728.43Show/hide
Query:  SAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPL
        +AM   AV++ +       +     T CV+++VPC  +LN T  P   CCN ++  ++ +  CLC + +  G        I  +QA  L  RCG + +  
Subjt:  SAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPL

Query:  SC
        +C
Subjt:  SC

AT1G73560.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.1e-0834.74Show/hide
Query:  MAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTR-NPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNP
        +AVV++ +  AT      Q T+C+ +L+PC  Y++     PP SCC P++ I++ +  CLC  I+       +A  +    A LLP  CG  VNP
Subjt:  MAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTR-NPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNP

AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.6e-1132.86Show/hide
Query:  VLVLACGATMGISQNQDTSCVNRLVPCLNYLNG-TRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQL--LPARCGQHVNPLS-CLT
        V +    +TM  +Q+  T+ +  + PCLNY+ G + +P + CCN L  ++ S+PDCLC +++  GS      GI++NQ Q   LP  C     P+S C T
Subjt:  VLVLACGATMGISQNQDTSCVNRLVPCLNYLNG-TRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQL--LPARCGQHVNPLS-CLT

Query:  ---------------PNNAGLPSMSSTLQVEVTDTDSSSD
                       PN++G  + S T+ V   D   SSD
Subjt:  ---------------PNNAGLPSMSSTLQVEVTDTDSSSD

AT5G13900.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.5e-3049.24Show/hide
Query:  MMERSAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH
        MM     +   V+L++A  + M I+  Q  SC+N+L PCLNYLNGT+  P+ CCNPL+S+I +NP+CLC +IS   S++AE AGID+N AQ+LPARCG+H
Subjt:  MMERSAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQH

Query:  VNPLSCLTPNNAGLPSMSSTLQVEVTDTDSSS
        VNP++CLT +  G  S +S     + +T S S
Subjt:  VNPLSCLTPNNAGLPSMSSTLQVEVTDTDSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAAGAAGCGCGATGGCGGCAATGGCAGTAGTACTGGTATTAGCTTGCGGCGCAACCATGGGAATCTCTCAAAATCAGGACACATCGTGTGTGAATAGGTTAGT
TCCATGCTTAAATTACTTGAACGGAACTCGAAATCCGCCGGAGAGTTGCTGTAATCCTCTGAGATCGATCATCGATTCCAATCCCGATTGCCTTTGCGGTTTAATTAGCA
GAGAAGGAAGCAATCGAGCAGAGGCGGCCGGCATCGATATCAACCAGGCTCAACTCTTGCCCGCTCGATGTGGCCAACATGTCAATCCTCTCTCTTGCCTCACTCCCAAT
AATGCTGGGTTGCCCTCCATGTCTTCCACTCTACAAGTGGAAGTGACTGATACGGATTCCTCGAGTGATCTTGAGCAGGGAGAAGTAAATTTGGAATATCTGTCGAATGA
AGAGAAGTTAGTCCCTGAAATTTTGAGGAGTGAGAGCGAGACAAATCTCGCTAGTCTCGCTGGTCGATTTTGTCTCACAAATCTCGTTAGTCTTGCTACTCTCGCTGCTC
TCGTTGGTCTCGCTAGTCAACAGTCTCACGATACAATTTTGGTCTTTTACTTGAATTCGCTGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAAGAAGCGCGATGGCGGCAATGGCAGTAGTACTGGTATTAGCTTGCGGCGCAACCATGGGAATCTCTCAAAATCAGGACACATCGTGTGTGAATAGGTTAGT
TCCATGCTTAAATTACTTGAACGGAACTCGAAATCCGCCGGAGAGTTGCTGTAATCCTCTGAGATCGATCATCGATTCCAATCCCGATTGCCTTTGCGGTTTAATTAGCA
GAGAAGGAAGCAATCGAGCAGAGGCGGCCGGCATCGATATCAACCAGGCTCAACTCTTGCCCGCTCGATGTGGCCAACATGTCAATCCTCTCTCTTGCCTCACTCCCAAT
AATGCTGGGTTGCCCTCCATGTCTTCCACTCTACAAGTGGAAGTGACTGATACGGATTCCTCGAGTGATCTTGAGCAGGGAGAAGTAAATTTGGAATATCTGTCGAATGA
AGAGAAGTTAGTCCCTGAAATTTTGAGGAGTGAGAGCGAGACAAATCTCGCTAGTCTCGCTGGTCGATTTTGTCTCACAAATCTCGTTAGTCTTGCTACTCTCGCTGCTC
TCGTTGGTCTCGCTAGTCAACAGTCTCACGATACAATTTTGGTCTTTTACTTGAATTCGCTGGTTTAG
Protein sequenceShow/hide protein sequence
MMERSAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLTPN
NAGLPSMSSTLQVEVTDTDSSSDLEQGEVNLEYLSNEEKLVPEILRSESETNLASLAGRFCLTNLVSLATLAALVGLASQQSHDTILVFYLNSLV