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Clc05G15730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G15730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:18559681..18563407
RNA-Seq ExpressionClc05G15730
SyntenyClc05G15730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_020262796.1 zinc finger protein CONSTANS-LIKE 1-like [Asparagus officinalis]1.2e-0458.33Show/hide
Query:  WTPLIPSSIHSASSLRIAYVSSSAVTSPIAKSSLRSRFVQRLASSLWDSSVSSSSSSLSPSIISSSDLARQL
        WT L PS I SA S R A+ SS   TS IA+SS + RF  R  S LWDS  SSSSSS SPS  SSSDL   L
Subjt:  WTPLIPSSIHSASSLRIAYVSSSAVTSPIAKSSLRSRFVQRLASSLWDSSVSSSSSSLSPSIISSSDLARQL
TrEMBL top hitse value%identityAlignment
A0A0A0LXS8 Uncharacterized protein4.2e-1984.72Show/hide
Query:  SSLRSRFVQRLASSLWDSSVSSSSSSLSPSIISSSDLARQLRPQKEQAGHNRRRELDLLFQILTDVFINLKA
        SS RSRFVQRLASS WDS VSSSSSSLSPSI SSSDLARQLRPQKEQAG  RR ELD LFQILT+V INLK+
Subjt:  SSLRSRFVQRLASSLWDSSVSSSSSSLSPSIISSSDLARQLRPQKEQAGHNRRRELDLLFQILTDVFINLKA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAAAACAAAGCAAACTGGATAACCCCGAACGGGACACGACCACGGCTCGTGACTCGTTAACTCAATTTGATCGTTTGTATGGAATCGTAGCTGACGAAGACGA
GCCGCACCGGCACCAGAAACAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGCGAGTTCGCTAAGGATAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGA
TCGCAAAGAGTTCACTAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTTATGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAATATCATCG
TCGGATCTGGCTAGACAGCTGAGGCCACAAAAAGAGCAGGCTGGACATAATAGAAGAAGGGAACTTGATCTACTATTTCAAATCCTTACTGATGTTTTTATTAATTTAAA
AGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAAAACAAAGCAAACTGGATAACCCCGAACGGGACACGACCACGGCTCGTGACTCGTTAACTCAATTTGATCGTTTGTATGGAATCGTAGCTGACGAAGACGA
GCCGCACCGGCACCAGAAACAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGCGAGTTCGCTAAGGATAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGA
TCGCAAAGAGTTCACTAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTTATGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAATATCATCG
TCGGATCTGGCTAGACAGCTGAGGCCACAAAAAGAGCAGGCTGGACATAATAGAAGAAGGGAACTTGATCTACTATTTCAAATCCTTACTGATGTTTTTATTAATTTAAA
AGCTTAA
Protein sequenceShow/hide protein sequence
MEAKQSKLDNPERDTTTARDSLTQFDRLYGIVADEDEPHRHQKQKWTPLIPSSIHSASSLRIAYVSSSAVTSPIAKSSLRSRFVQRLASSLWDSSVSSSSSSLSPSIISS
SDLARQLRPQKEQAGHNRRRELDLLFQILTDVFINLKA