; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G16100 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G16100
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGlutaredoxin
Genome locationClcChr05:21526703..21527341
RNA-Seq ExpressionClc05G16100
SyntenyClc05G16100
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0048653 - anther development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0097573 - glutathione oxidoreductase activity (molecular function)
InterPro domainsIPR002109 - Glutaredoxin
IPR011905 - Glutaredoxin-like, plant II
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148005.1 glutaredoxin-C1 [Cucumis sativus]7.4e-5992.91Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV
        MQYQAQQQYG S+SSSSSYS NDP+RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV  TVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKL+
Subjt:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV

Query:  GSMDRVMASHINGSLVPLLKNAGALWL
        GSMDRVMASHINGSLVPLLK+AGALWL
Subjt:  GSMDRVMASHINGSLVPLLKNAGALWL

XP_008450140.1 PREDICTED: glutaredoxin-C1-like [Cucumis melo]2.6e-5993.7Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV
        MQYQAQQQYG S+SSSSSYSVNDP+RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV  TVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKL+
Subjt:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV

Query:  GSMDRVMASHINGSLVPLLKNAGALWL
        GSMDRVMASHINGSLVPLLK+AGALWL
Subjt:  GSMDRVMASHINGSLVPLLKNAGALWL

XP_022935242.1 glutaredoxin-C1-like [Cucurbita moschata]4.2e-5489.92Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG--SSSAVPAVFIGGK
        MQYQAQQQYG SSSSSS      P+RRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGVNPTVYELDEDPRGKE+EKALMRLMG  SSSAVPAVFIGGK
Subjt:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG--SSSAVPAVFIGGK

Query:  LVGSMDRVMASHINGSLVPLLKNAGALWL
        LVGSMDRVMASHINGSLVPLLKNAGALWL
Subjt:  LVGSMDRVMASHINGSLVPLLKNAGALWL

XP_023528287.1 glutaredoxin-C1-like [Cucurbita pepo subsp. pepo]4.2e-5489.92Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSS--AVPAVFIGGK
        MQYQAQQQYG SSSSSS      P+RRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGVNPTVYELDEDPRGKE+EKALMRLMGSSS  AVPAVFIGGK
Subjt:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSS--AVPAVFIGGK

Query:  LVGSMDRVMASHINGSLVPLLKNAGALWL
        LVGSMDRVMASHINGSLVPLLKNAGALWL
Subjt:  LVGSMDRVMASHINGSLVPLLKNAGALWL

XP_038874416.1 glutaredoxin-C1-like [Benincasa hispida]5.7e-5996.06Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV
        MQYQAQQQYG SSSSSSSYS ND LRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKLV
Subjt:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV

Query:  GSMDRVMASHINGSLVPLLKNAGALWL
        GSMDRVM SHINGSLVPLLKNAGALWL
Subjt:  GSMDRVMASHINGSLVPLLKNAGALWL

TrEMBL top hitse value%identityAlignment
A0A0A0LB28 Glutaredoxin domain-containing protein3.6e-5992.91Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV
        MQYQAQQQYG S+SSSSSYS NDP+RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV  TVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKL+
Subjt:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV

Query:  GSMDRVMASHINGSLVPLLKNAGALWL
        GSMDRVMASHINGSLVPLLK+AGALWL
Subjt:  GSMDRVMASHINGSLVPLLKNAGALWL

A0A1S3BP86 glutaredoxin-C1-like1.2e-5993.7Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV
        MQYQAQQQYG S+SSSSSYSVNDP+RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV  TVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKL+
Subjt:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV

Query:  GSMDRVMASHINGSLVPLLKNAGALWL
        GSMDRVMASHINGSLVPLLK+AGALWL
Subjt:  GSMDRVMASHINGSLVPLLKNAGALWL

A0A5A7V3D7 Glutaredoxin-C1-like1.2e-5993.7Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV
        MQYQAQQQYG S+SSSSSYSVNDP+RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV  TVYELDEDPRGKE+EKALMRLMGSSSAVPAVFIGGKL+
Subjt:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLV

Query:  GSMDRVMASHINGSLVPLLKNAGALWL
        GSMDRVMASHINGSLVPLLK+AGALWL
Subjt:  GSMDRVMASHINGSLVPLLKNAGALWL

A0A6J1F512 glutaredoxin-C1-like2.0e-5489.92Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG--SSSAVPAVFIGGK
        MQYQAQQQYG SSSSSS      P+RRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGVNPTVYELDEDPRGKE+EKALMRLMG  SSSAVPAVFIGGK
Subjt:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG--SSSAVPAVFIGGK

Query:  LVGSMDRVMASHINGSLVPLLKNAGALWL
        LVGSMDRVMASHINGSLVPLLKNAGALWL
Subjt:  LVGSMDRVMASHINGSLVPLLKNAGALWL

A0A6J1J7B3 glutaredoxin-C1-like4.5e-5489.84Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSS-AVPAVFIGGKL
        MQYQAQQQYG SSSSSS      P+RRIE+MAAENAVVMFS++SCCMCHAVKRLFCGMGVNPTVYELDEDPRGKE+EKALMRLMGSSS AVPAVFIGGKL
Subjt:  MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSS-AVPAVFIGGKL

Query:  VGSMDRVMASHINGSLVPLLKNAGALWL
        VGSMDRVMASHINGSLVPLLKNAGALWL
Subjt:  VGSMDRVMASHINGSLVPLLKNAGALWL

SwissProt top hitse value%identityAlignment
Q0JDM4 Glutaredoxin-C55.2e-3962.22Show/hide
Query:  MQYQA----QQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG----SSSAVPA
        MQY A    Q  Y  +++   + +      R+ER+A+E+AVV+FS++SCCMCHAVKRLFCGMGV+P V+ELD DPRG++LE+AL RL+G    +++AVP 
Subjt:  MQYQA----QQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG----SSSAVPA

Query:  VFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL
        VFIGGKLVG+MDRVMA+HINGSLVPLLK AGALWL
Subjt:  VFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL

Q6K609 Glutaredoxin-C31.8e-3963.7Show/hide
Query:  MQY-QAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG-------SSSAVPA
        MQY  A +Q     +++ +  V   + R+ER+A+E+AVV+FS++SCCMCHAVKRLFCGMGV+PTV+ELD DPRG+ELE+AL RL+G       S   VP 
Subjt:  MQY-QAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG-------SSSAVPA

Query:  VFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL
        VFIGGKLVG+MDRVMA+HINGSLVPLLK AGALWL
Subjt:  VFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL

Q7G8Y5 Glutaredoxin-C16.8e-3973.27Show/hide
Query:  RIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALW
        R+ R+AA+ AVV+FSM+SCCMCH V RLFC +GVNPTV ELDEDPRGKE+EKAL RL+G S AVPAVFIGG+LVGS D+VM+ H++G+LVPLL+NAGALW
Subjt:  RIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALW

Query:  L
        +
Subjt:  L

Q8LF89 Glutaredoxin-C81.2e-3557.86Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVN------DPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSS------
        MQY+ + +   S +++S    N      + L +IE MAAENAVV+FS+++CCMCHA+KRLF GMGV+P V+ELD  P G E+ +AL+RL+G SS      
Subjt:  MQYQAQQQYGTSSSSSSSYSVN------DPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSS------

Query:  -AVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL
         A+P VFIGGK+VG+M+RVMASHINGSLVPLLK+AGALWL
Subjt:  -AVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL

Q96305 Glutaredoxin-C73.9e-3457.66Show/hide
Query:  MQYQAQQQYGTSSSSSSSYS-----VNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG-----SSSAV
        MQYQ  + +G+   SS  +       +  L RIE +A+E+AVV+FS+++CCMCHAVK LF GMGV+P V+ELD  P G ++++AL+RL+G     S  ++
Subjt:  MQYQAQQQYGTSSSSSSSYS-----VNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG-----SSSAV

Query:  PAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL
        P VFIGGKLVG+MDRVMASHINGSLVPLLK+AGALWL
Subjt:  PAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL

Arabidopsis top hitse value%identityAlignment
AT3G02000.1 Thioredoxin superfamily protein2.7e-3557.66Show/hide
Query:  MQYQAQQQYGTSSSSSSSYS-----VNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG-----SSSAV
        MQYQ  + +G+   SS  +       +  L RIE +A+E+AVV+FS+++CCMCHAVK LF GMGV+P V+ELD  P G ++++AL+RL+G     S  ++
Subjt:  MQYQAQQQYGTSSSSSSSYS-----VNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMG-----SSSAV

Query:  PAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL
        P VFIGGKLVG+MDRVMASHINGSLVPLLK+AGALWL
Subjt:  PAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL

AT4G15670.1 Thioredoxin superfamily protein6.5e-2955.34Show/hide
Query:  LRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGA
        + ++++M +E ++V+FS  SCCM H +K LF  +GVNPT+YELDE  RGKE+E+AL +L G S  VP VFIGG+LVG  ++VM+ H+N SL+P+LK  GA
Subjt:  LRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGA

Query:  LWL
        LWL
Subjt:  LWL

AT4G15700.1 Thioredoxin superfamily protein2.2e-2958.25Show/hide
Query:  LRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGA
        +  +++M +E +VV+FS  SCCM H +K LF  +GVNPT+YELDE  RGKE+E AL +L G S  VP VFIGG+LVG  ++VM+ H+N SLVP+LK AGA
Subjt:  LRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGA

Query:  LWL
        LWL
Subjt:  LWL

AT5G14070.1 Thioredoxin superfamily protein8.5e-3757.86Show/hide
Query:  MQYQAQQQYGTSSSSSSSYSVN------DPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSS------
        MQY+ + +   S +++S    N      + L +IE MAAENAVV+FS+++CCMCHA+KRLF GMGV+P V+ELD  P G E+ +AL+RL+G SS      
Subjt:  MQYQAQQQYGTSSSSSSSYSVN------DPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSS------

Query:  -AVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL
         A+P VFIGGK+VG+M+RVMASHINGSLVPLLK+AGALWL
Subjt:  -AVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL

AT5G18600.1 Thioredoxin superfamily protein2.9e-2959Show/hide
Query:  IERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL
        I +M  E  VV++S +SCCM H +K L C  G NP VYELDE  RG+E+E+AL+RL G S AVP VFIGG+LVG  + VM+ H+NGSL+P+LK AGALW+
Subjt:  IERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATACCAAGCACAACAACAATACGGAACTTCCTCTTCTTCTTCCTCCTCCTATTCCGTCAACGATCCGTTGCGTCGGATAGAGCGTATGGCAGCCGAGAACGCTGT
GGTCATGTTTAGCATGACTTCATGCTGCATGTGCCACGCCGTCAAACGTCTCTTTTGTGGAATGGGAGTTAACCCTACAGTGTACGAGCTGGACGAGGACCCGAGAGGAA
AAGAGCTAGAGAAAGCCTTGATGCGGCTAATGGGAAGCTCCTCTGCCGTCCCCGCTGTCTTCATCGGCGGGAAACTTGTTGGCTCTATGGATAGAGTTATGGCCTCTCAT
ATCAATGGCTCTCTTGTTCCTCTCCTCAAAAACGCTGGCGCCCTTTGGCTCTAA
mRNA sequenceShow/hide mRNA sequence
TTCGTCTTCTTCAATCCAACTTGCCTTTTCTTTTTACCTTCTTTTGTCTTTCAAAATATCAGCAACCATTGATAACCAGAAAATGCAATACCAAGCACAACAACAATACG
GAACTTCCTCTTCTTCTTCCTCCTCCTATTCCGTCAACGATCCGTTGCGTCGGATAGAGCGTATGGCAGCCGAGAACGCTGTGGTCATGTTTAGCATGACTTCATGCTGC
ATGTGCCACGCCGTCAAACGTCTCTTTTGTGGAATGGGAGTTAACCCTACAGTGTACGAGCTGGACGAGGACCCGAGAGGAAAAGAGCTAGAGAAAGCCTTGATGCGGCT
AATGGGAAGCTCCTCTGCCGTCCCCGCTGTCTTCATCGGCGGGAAACTTGTTGGCTCTATGGATAGAGTTATGGCCTCTCATATCAATGGCTCTCTTGTTCCTCTCCTCA
AAAACGCTGGCGCCCTTTGGCTCTAAAACTTCGACCTATGCGTCTGGATAAAATTTTATTACTGTACGACAGTCTTCTTGACCAATTGAGATATGTTGGTGTTTGCAGTA
AAGAGAAAAAAAAAAATGTGAATTAAGAAAGTTGAAAAAAGAGGAAGAGGAGAGTGTTGGGTACTTGTAATAATTAGCTCCCTCCTCTG
Protein sequenceShow/hide protein sequence
MQYQAQQQYGTSSSSSSSYSVNDPLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKELEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMASH
INGSLVPLLKNAGALWL