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Clc05G16560 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G16560
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionFlocculation protein FLO11-like
Genome locationClcChr05:23836533..23839708
RNA-Seq ExpressionClc05G16560
SyntenyClc05G16560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045418.1 uncharacterized protein E6C27_scaffold294G00110 [Cucumis melo var. makuwa]1.2e-1729.18Show/hide
Query:  NDQVCVDPKISGEAKPSTGISRDKNIDDLSMLSLNSLQITSDDNDDWGFLSSSEDEAPINVRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEGASLWK
        +DQ        G   P++G+ +  +I+    L  +S+Q      D      S +       ++ R +    G+     N+  V +DG+SFH +E    WK
Subjt:  NDQVCVDPKISGEAKPSTGISRDKNIDDLSMLSLNSLQITSDDNDDWGFLSSSEDEAPINVRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEGASLWK

Query:  YVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQLSTVSENVME--------QHPSMRELVFELKGGAQTSWPAKGQLPSRALS-----
        +VV+ +I +E  +SD+   C+ +M+L+ ++GL KTI  +GPFY QL  + E V+           PS   L  +L GG  +SWP  G +P+ ALS     
Subjt:  YVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQLSTVSENVME--------QHPSMRELVFELKGGAQTSWPAKGQLPSRALS-----

Query:  -------------SY-LKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPDIKISSSMPHEDVPSR
                     S+ +KLPI   R F  +LL   A IL  ++  GP P   ++   L +  HV DI       H+ +P+R
Subjt:  -------------SY-LKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPDIKISSSMPHEDVPSR

TYJ96176.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]1.2e-1733.86Show/hide
Query:  GKGKANPIGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQLS-TVSENVMEQHPSMRELVFELK
        G+ K  P  NV  VP+DGV FHS+E A   KYVVK +I +E  +SD+   C  ++DL+  + L +T   +    + L  T   +    +P+ + LV EL 
Subjt:  GKGKANPIGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQLS-TVSENVMEQHPSMRELVFELK

Query:  GGAQTSWPAKGQLPSRAL-----------------SSYLKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPDI
        GG    WP  GQLP  +L                 +  + +PIC+ R+  G LL+Q+  IL   + IG AP L  +   L +  H+PD+
Subjt:  GGAQTSWPAKGQLPSRAL-----------------SSYLKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPDI

XP_038889203.1 uncharacterized protein LOC120079088 [Benincasa hispida]3.2e-1831.53Show/hide
Query:  LKRNDQVCVDPKISG--EAKPSTGISRDKNIDDLSMLSLNSLQITSDDNDDWGFLSSSEDEAPINVRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEG
        + RN +  V+P I    +A+ S G+   K++D        S+ I+ D N+D    +S E    ++ + +   A   G                       
Subjt:  LKRNDQVCVDPKISG--EAKPSTGISRDKNIDDLSMLSLNSLQITSDDNDDWGFLSSSEDEAPINVRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEG

Query:  ASLWKYVVKWKIVNEKELSDRTQECLDLMDL------LLESGLDKTILCLGPFYAQLSTVSENVMEQHPSMRELVFELKGGAQTSWPAKGQLPSRALS--
        ASLWKYVVK  IV+EKELS RTQEC  LM+L      +     D +   +  F  +   V ENV EQHPS+R+LVFEL GGA+++WP KGQL + ALS  
Subjt:  ASLWKYVVKWKIVNEKELSDRTQECLDLMDL------LLESGLDKTILCLGPFYAQLSTVSENVMEQHPSMRELVFELKGGAQTSWPAKGQLPSRALS--

Query:  --------SY----------------------------------------------LKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIH
                SY                                              LK   C+  L  GILLSQK ++L  S+ + P+PSLF I+
Subjt:  --------SY----------------------------------------------LKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIH

XP_038904247.1 uncharacterized protein LOC120090596 [Benincasa hispida]2.1e-1731.54Show/hide
Query:  SSSEDEAPINVRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQL----
        SSSED+  I VR       G+ K  P  NV +V +D +SFHS++    WK+VV+  IV+EK  SD+T+ CL +MDLL   GL KT++ L PFY QL    
Subjt:  SSSEDEAPINVRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQL----

Query:  --------------------------------------STVSENVMEQHPSMRELVFELKGGAQTSWPAK-----------------------------G
                                               T S  + + HPS+ E + EL GG     P+                               
Subjt:  --------------------------------------STVSENVMEQHPSMRELVFELKGGAQTSWPAK-----------------------------G

Query:  QLPSRALSSYLKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPD
        QL   A S  +KLPI  SR+FFG+LLSQ   IL P++   P P L N++  + +  +  D
Subjt:  QLPSRALSSYLKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPD

XP_038904458.1 uncharacterized protein LOC120090822 [Benincasa hispida]2.7e-3341.03Show/hide
Query:  IGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQL---------------------STVSENVME
        + NV  VPLDGVSFH++E ASLWKYVVK  IV+EKELSD TQ+C+  M+L+  + L++T+L LGP+Y  L                       V ENV +
Subjt:  IGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQL---------------------STVSENVME

Query:  QHPSMRELVFELKGGAQTSWPAKGQLPSRAL------------------SSYLKLPICYSRLFFGI-----LLSQKANILLPSEPIGPAPSLFNIHPCLL
        QHPS+R+LVFEL G A+++WP +GQLP+  L                  S    L I  + L + +         K ++    E IGP  SLF+I P LL
Subjt:  QHPSMRELVFELKGGAQTSWPAKGQLPSRAL------------------SSYLKLPICYSRLFFGI-----LLSQKANILLPSEPIGPAPSLFNIHPCLL

Query:  KSHHVPDIKISSSMPHEDVPSRTLMASSFSSHIL
        + H+V D+  ++   H D  S+ +MASSFS HIL
Subjt:  KSHHVPDIKISSSMPHEDVPSRTLMASSFSSHIL

TrEMBL top hitse value%identityAlignment
A0A1S3AV82 uncharacterized protein LOC1034830261.1e-1629.83Show/hide
Query:  RVTRGLAKGKGKANPIGNVALVPL-DGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQL--------------
        ++ R +    G+     N+  VP+ DG+SFH +E    WK++V+ +I N+  +SD+   C+ +M+L+ + GL KTIL +G FY QL              
Subjt:  RVTRGLAKGKGKANPIGNVALVPL-DGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQL--------------

Query:  ----------------------------STVSENVMEQHPSMRELVFELKGGAQTSWPAKGQLPSRALS---------------SY-LKLPICYSRLFFG
                                    + VS N     PS   L   L GG  +SWP  G +P+ ALS               S+ +KLPI   R F G
Subjt:  ----------------------------STVSENVMEQHPSMRELVFELKGGAQTSWPAKGQLPSRALS---------------SY-LKLPICYSRLFFG

Query:  ILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPDI
        +LL   A +L  S+  GP P   ++   L +  HVPDI
Subjt:  ILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPDI

A0A1S3CL10 uncharacterized protein LOC1035020081.9e-1629.44Show/hide
Query:  VRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQL--------------
        VR  R ++   G      N+  + +DGVSFHS+EGA  WKYVVK  IV+E  LSD+   C  + DL+  + L  T+  +GPFY +L              
Subjt:  VRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQL--------------

Query:  ----------------------------STVSENVMEQHPSMRELVFELKGGAQTSWPAKGQLPSRALS-SYLKLPICYSRLFFGILLSQKANILLPSEP
                                     T+  N    +P+++ L  EL       WP  GQLP  +L+  Y  L    SRL  G +LSQ+  IL P + 
Subjt:  ----------------------------STVSENVMEQHPSMRELVFELKGGAQTSWPAKGQLPSRALS-SYLKLPICYSRLFFGILLSQKANILLPSEP

Query:  IGPAPSLFNIHPCLLKSHHVPDIKISSSMPHEDVPSRTLMASSFSSHI
        +G AP    +   L +  H+P++ +      E+ P  T  A++  S +
Subjt:  IGPAPSLFNIHPCLLKSHHVPDIKISSSMPHEDVPSRTLMASSFSSHI

A0A5A7TRD1 Uncharacterized protein5.9e-1829.18Show/hide
Query:  NDQVCVDPKISGEAKPSTGISRDKNIDDLSMLSLNSLQITSDDNDDWGFLSSSEDEAPINVRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEGASLWK
        +DQ        G   P++G+ +  +I+    L  +S+Q      D      S +       ++ R +    G+     N+  V +DG+SFH +E    WK
Subjt:  NDQVCVDPKISGEAKPSTGISRDKNIDDLSMLSLNSLQITSDDNDDWGFLSSSEDEAPINVRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEGASLWK

Query:  YVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQLSTVSENVME--------QHPSMRELVFELKGGAQTSWPAKGQLPSRALS-----
        +VV+ +I +E  +SD+   C+ +M+L+ ++GL KTI  +GPFY QL  + E V+           PS   L  +L GG  +SWP  G +P+ ALS     
Subjt:  YVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQLSTVSENVME--------QHPSMRELVFELKGGAQTSWPAKGQLPSRALS-----

Query:  -------------SY-LKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPDIKISSSMPHEDVPSR
                     S+ +KLPI   R F  +LL   A IL  ++  GP P   ++   L +  HV DI       H+ +P+R
Subjt:  -------------SY-LKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPDIKISSSMPHEDVPSR

A0A5D3BBA9 Flocculation protein FLO11-like5.9e-1833.86Show/hide
Query:  GKGKANPIGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQLS-TVSENVMEQHPSMRELVFELK
        G+ K  P  NV  VP+DGV FHS+E A   KYVVK +I +E  +SD+   C  ++DL+  + L +T   +    + L  T   +    +P+ + LV EL 
Subjt:  GKGKANPIGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQLS-TVSENVMEQHPSMRELVFELK

Query:  GGAQTSWPAKGQLPSRAL-----------------SSYLKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPDI
        GG    WP  GQLP  +L                 +  + +PIC+ R+  G LL+Q+  IL   + IG AP L  +   L +  H+PD+
Subjt:  GGAQTSWPAKGQLPSRAL-----------------SSYLKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPDI

A0A5D3C7L1 Flocculation protein FLO11-like1.9e-1629.44Show/hide
Query:  VRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQL--------------
        VR  R ++   G      N+  + +DGVSFHS+EGA  WKYVVK  IV+E  LSD+   C  + DL+  + L  T+  +GPFY +L              
Subjt:  VRVTRGLAKGKGKANPIGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQL--------------

Query:  ----------------------------STVSENVMEQHPSMRELVFELKGGAQTSWPAKGQLPSRALS-SYLKLPICYSRLFFGILLSQKANILLPSEP
                                     T+  N    +P+++ L  EL       WP  GQLP  +L+  Y  L    SRL  G +LSQ+  IL P + 
Subjt:  ----------------------------STVSENVMEQHPSMRELVFELKGGAQTSWPAKGQLPSRALS-SYLKLPICYSRLFFGILLSQKANILLPSEP

Query:  IGPAPSLFNIHPCLLKSHHVPDIKISSSMPHEDVPSRTLMASSFSSHI
        +G AP    +   L +  H+P++ +      E+ P  T  A++  S +
Subjt:  IGPAPSLFNIHPCLLKSHHVPDIKISSSMPHEDVPSRTLMASSFSSHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCGGAGCGCCACGACGCTTCAAAGCAGGGTTGCGGCACTTGCTGTGTTTCGCCAGTAGAACCCTCGGGAAAAAGCCCTGCAGCTGCGCCCAGGCAGCGCCGCTG
CATTGTGGCTTCAGGGACATTTAGGTCATTTTGGAGTTTTATTTTTCGATTGATGTTGTGGAACTCCTTTTGGGGTAGTGCTATGGCGCTTTTTCCCGAGAGCAGAAGTC
GTCTCAACATAGTGCCACCGTCGCGACACTACAGCAAGGCGCCAAGGGTAGAATTCCATGATGGTCAACCCTGCGGCGGCACCACCTTTCCATATCGAATTATCGTTGAA
ACTGTGGCCTTTGTTACTAGTATGTCTGAGGCATGTAATGTCGAGGATTCAGTTTCTCCTCATGATCACATCAAGCATGCCGCTACTACTCCTTCCATGACTCTTGAAAA
ATCTGCCCTGAAGAGGAATGATCAAGTGTGTGTTGATCCTAAGATCAGTGGCGAAGCCAAGCCTTCTACTGGAATCTCAAGAGATAAGAATATTGATGATCTATCAATGC
TGAGTCTGAATAGTCTGCAAATCACATCTGATGACAATGATGATTGGGGTTTTCTTAGCAGTTCTGAGGATGAAGCTCCTATCAATGTGAGAGTAACTAGAGGTTTGGCT
AAGGGAAAAGGCAAGGCAAATCCTATAGGGAATGTTGCTTTGGTTCCTTTAGATGGTGTATCCTTCCATTCTAAAGAAGGTGCAAGTCTCTGGAAATATGTGGTTAAATG
GAAGATAGTCAATGAAAAGGAGCTCTCTGACAGAACTCAAGAATGCTTGGACCTAATGGACCTTCTCCTTGAATCTGGATTAGATAAAACTATACTATGCTTGGGTCCCT
TTTATGCTCAGTTGAGCACTGTTTCAGAGAATGTTATGGAGCAGCATCCATCGATGAGGGAGTTGGTTTTTGAACTGAAAGGTGGTGCTCAGACCTCTTGGCCTGCAAAA
GGTCAGTTGCCCTCAAGAGCTCTCAGTTCATATCTTAAGCTTCCCATTTGCTATTCCAGGCTGTTTTTTGGGATTCTACTATCCCAAAAGGCTAATATTTTATTGCCCTC
TGAACCTATAGGACCTGCCCCCAGTTTATTTAACATCCATCCCTGTCTTCTTAAGAGTCATCATGTGCCAGACATTAAGATCTCTTCTTCTATGCCCCACGAGGATGTTC
CCAGTCGCACTTTAATGGCATCCTCTTTTAGCAGCCACATCTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCGGAGCGCCACGACGCTTCAAAGCAGGGTTGCGGCACTTGCTGTGTTTCGCCAGTAGAACCCTCGGGAAAAAGCCCTGCAGCTGCGCCCAGGCAGCGCCGCTG
CATTGTGGCTTCAGGGACATTTAGGTCATTTTGGAGTTTTATTTTTCGATTGATGTTGTGGAACTCCTTTTGGGGTAGTGCTATGGCGCTTTTTCCCGAGAGCAGAAGTC
GTCTCAACATAGTGCCACCGTCGCGACACTACAGCAAGGCGCCAAGGGTAGAATTCCATGATGGTCAACCCTGCGGCGGCACCACCTTTCCATATCGAATTATCGTTGAA
ACTGTGGCCTTTGTTACTAGTATGTCTGAGGCATGTAATGTCGAGGATTCAGTTTCTCCTCATGATCACATCAAGCATGCCGCTACTACTCCTTCCATGACTCTTGAAAA
ATCTGCCCTGAAGAGGAATGATCAAGTGTGTGTTGATCCTAAGATCAGTGGCGAAGCCAAGCCTTCTACTGGAATCTCAAGAGATAAGAATATTGATGATCTATCAATGC
TGAGTCTGAATAGTCTGCAAATCACATCTGATGACAATGATGATTGGGGTTTTCTTAGCAGTTCTGAGGATGAAGCTCCTATCAATGTGAGAGTAACTAGAGGTTTGGCT
AAGGGAAAAGGCAAGGCAAATCCTATAGGGAATGTTGCTTTGGTTCCTTTAGATGGTGTATCCTTCCATTCTAAAGAAGGTGCAAGTCTCTGGAAATATGTGGTTAAATG
GAAGATAGTCAATGAAAAGGAGCTCTCTGACAGAACTCAAGAATGCTTGGACCTAATGGACCTTCTCCTTGAATCTGGATTAGATAAAACTATACTATGCTTGGGTCCCT
TTTATGCTCAGTTGAGCACTGTTTCAGAGAATGTTATGGAGCAGCATCCATCGATGAGGGAGTTGGTTTTTGAACTGAAAGGTGGTGCTCAGACCTCTTGGCCTGCAAAA
GGTCAGTTGCCCTCAAGAGCTCTCAGTTCATATCTTAAGCTTCCCATTTGCTATTCCAGGCTGTTTTTTGGGATTCTACTATCCCAAAAGGCTAATATTTTATTGCCCTC
TGAACCTATAGGACCTGCCCCCAGTTTATTTAACATCCATCCCTGTCTTCTTAAGAGTCATCATGTGCCAGACATTAAGATCTCTTCTTCTATGCCCCACGAGGATGTTC
CCAGTCGCACTTTAATGGCATCCTCTTTTAGCAGCCACATCTTATAG
Protein sequenceShow/hide protein sequence
MLPERHDASKQGCGTCCVSPVEPSGKSPAAAPRQRRCIVASGTFRSFWSFIFRLMLWNSFWGSAMALFPESRSRLNIVPPSRHYSKAPRVEFHDGQPCGGTTFPYRIIVE
TVAFVTSMSEACNVEDSVSPHDHIKHAATTPSMTLEKSALKRNDQVCVDPKISGEAKPSTGISRDKNIDDLSMLSLNSLQITSDDNDDWGFLSSSEDEAPINVRVTRGLA
KGKGKANPIGNVALVPLDGVSFHSKEGASLWKYVVKWKIVNEKELSDRTQECLDLMDLLLESGLDKTILCLGPFYAQLSTVSENVMEQHPSMRELVFELKGGAQTSWPAK
GQLPSRALSSYLKLPICYSRLFFGILLSQKANILLPSEPIGPAPSLFNIHPCLLKSHHVPDIKISSSMPHEDVPSRTLMASSFSSHIL