; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G16660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G16660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionphotosynthetic NDH subunit of lumenal location 3, chloroplastic
Genome locationClcChr05:24322142..24323668
RNA-Seq ExpressionClc05G16660
SyntenyClc05G16660
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009344 - nitrite reductase complex [NAD(P)H] (cellular component)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsIPR008797 - Oxygen-evolving enhancer protein 3
IPR023222 - PsbQ-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015220.1 Photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.3e-10088.99Show/hide
Query:  MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTR
        MARLANLN   EKFSAIP L KLQ T KR KITG L+KQ +VSSH+ISLTRRLALTSL SVALFGNA  EIASANEYWL+GPLP+PSVYNNIANE TGTR
Subjt:  MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA +GEKQPL DLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_004151964.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucumis sativus]2.5e-10795.35Show/hide
Query:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL
        MARLANLN KFSAIPNLPKLQN HKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWL+GPLPVPSV NNI NE TGTRSFL
Subjt:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL

Query:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY
        KTGIYIANIGT+GRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAA+ EKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY
Subjt:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

XP_008454569.1 PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucumis melo]7.3e-10794.88Show/hide
Query:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL
        MARLANLN KFSAIPNLPKLQN HK+LKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWL+GPLPVPSV NNIANE TGTRSFL
Subjt:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL

Query:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY
        KTGIYIANIGT+GRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAA+ EKQPLVDLANRLFDNFEKLE+AAKQKNLSETESYY
Subjt:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

XP_022139520.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Momordica charantia]7.0e-10290.37Show/hide
Query:  MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTR
        MARLANLN   +KFSAIP LPKLQN  KRLKI GFL KQT+VSSH  S TRRLALTS+VSVALFGNAS EIASANEYWL+GPLPVPSVYNNIANE TGTR
Subjt:  MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAA+GEKQPL +LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_038899633.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Benincasa hispida]1.5e-10794.42Show/hide
Query:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL
        MARLANLN+KF+AIPNLPKLQNT KRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNAS EIASANEYWL+GPLPVPSVYNNIANE TGTRSFL
Subjt:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL

Query:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY
        KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISA  EG KQPL+DLANRLFDNFEKLEDAAKQKNLSETE+YY
Subjt:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTP+LQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

TrEMBL top hitse value%identityAlignment
A0A0A0L7N1 Uncharacterized protein1.2e-10795.35Show/hide
Query:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL
        MARLANLN KFSAIPNLPKLQN HKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWL+GPLPVPSV NNI NE TGTRSFL
Subjt:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL

Query:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY
        KTGIYIANIGT+GRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAA+ EKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY
Subjt:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

A0A1S3BZP3 photosynthetic NDH subunit of lumenal location 3, chloroplastic3.5e-10794.88Show/hide
Query:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL
        MARLANLN KFSAIPNLPKLQN HK+LKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWL+GPLPVPSV NNIANE TGTRSFL
Subjt:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL

Query:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY
        KTGIYIANIGT+GRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAA+ EKQPLVDLANRLFDNFEKLE+AAKQKNLSETESYY
Subjt:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

A0A5A7TX10 Photosynthetic NDH subunit of lumenal location 33.5e-10794.88Show/hide
Query:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL
        MARLANLN KFSAIPNLPKLQN HK+LKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWL+GPLPVPSV NNIANE TGTRSFL
Subjt:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFL

Query:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY
        KTGIYIANIGT+GRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAA+ EKQPLVDLANRLFDNFEKLE+AAKQKNLSETESYY
Subjt:  KTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

A0A6J1CCI9 photosynthetic NDH subunit of lumenal location 3, chloroplastic3.4e-10290.37Show/hide
Query:  MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTR
        MARLANLN   +KFSAIP LPKLQN  KRLKI GFL KQT+VSSH  S TRRLALTS+VSVALFGNAS EIASANEYWL+GPLPVPSVYNNIANE TGTR
Subjt:  MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAA+GEKQPL +LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

A0A6J1FHS2 photosynthetic NDH subunit of lumenal location 3, chloroplastic1.9e-10088.53Show/hide
Query:  MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTR
        MARLANLN   EKFSAIP L KLQ T KR KI G L+KQ +VSSH++SLTRRLALTSL SVALFGNAS EIASANEYWL+GPLP+PSVYNNIANE TGTR
Subjt:  MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA +GEKQPL DLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

SwissProt top hitse value%identityAlignment
P83646 Oxygen-evolving enhancer protein 3, chloroplastic2.3e-1027.15Show/hide
Query:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIA---SANEYWLNGPLP----VPSVYNNIANEN
        MA +  L++    +P  P+      RL +      + D ++  +   RR A+  LV+  + G A  + A   +A    L  P P    +P   N  +++ 
Subjt:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIA---SANEYWLNGPLP----VPSVYNNIANEN

Query:  TGTRSFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNL
          T   L+   Y+  +       R K+ A D++ +  LI K    +VR  LRL+++++ YD   VI++  + EK+ L DL  +LF   + L+ AAK K+ 
Subjt:  TGTRSFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNL

Query:  SETESYYQQTTPILQEVMDRM
         E E YY  T   L +V+ ++
Subjt:  SETESYYQQTTPILQEVMDRM

Q0D5P8 Oxygen-evolving enhancer protein 3, chloroplastic2.3e-1027.15Show/hide
Query:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIA---SANEYWLNGPLP----VPSVYNNIANEN
        MA +  L++    +P  P+      RL +      + D ++  +   RR A+  LV+  + G A  + A   +A    L  P P    +P   N  +++ 
Subjt:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIA---SANEYWLNGPLP----VPSVYNNIANEN

Query:  TGTRSFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNL
          T   L+   Y+  +       R K+ A D++ +  LI K    +VR  LRL+++++ YD   VI++  + EK+ L DL  +LF   + L+ AAK K+ 
Subjt:  TGTRSFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNL

Query:  SETESYYQQTTPILQEVMDRM
         E E YY  T   L +V+ ++
Subjt:  SETESYYQQTTPILQEVMDRM

Q41932 Oxygen-evolving enhancer protein 3-2, chloroplastic1.6e-1129.95Show/hide
Query:  LKKQTDVSSHQISLTRRLALTSLVSVALFGNA--SPEIASANEYWLNGPLPVPSVYNNIANENTGTRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLA
        ++ Q +VS  + S   R ++  LV+  L G +      A A    + GP P+PS      + +   R F   LK   YI  +       R K  A +++ 
Subjt:  LKKQTDVSSHQISLTRRLALTSLVSVALFGNA--SPEIASANEYWLNGPLPVPSVYNNIANENTGTRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLA

Query:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
        +   I K    YV+  LRL+++++ YD + VISA  + EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L  V+ ++
Subjt:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

Q9SGH4 Photosynthetic NDH subunit of lumenal location 3, chloroplastic2.2e-6658.64Show/hide
Query:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTD--VSSHQISLTRRLALTSLVSVAL---FGNASPEIASANEYWLNGPLPVPSVYNNIANENTG
        MA   +LN   + +P+LPKL  + K  K +GF  ++T+       + +TRR+ L   VS+ L    G  +  +A  N +W++GPLP+P +YNNI NE TG
Subjt:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTD--VSSHQISLTRRLALTSLVSVAL---FGNASPEIASANEYWLNGPLPVPSVYNNIANENTG

Query:  TRSFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSE
        TR+F+K G+Y+A+IGT+GR YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAAA  +KQPL DLANRLFDNFEKLEDAAK KNL+E
Subjt:  TRSFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSE

Query:  TESYYQQTTPILQEVMDRMA
        TES Y+ T  +LQEVM RMA
Subjt:  TESYYQQTTPILQEVMDRMA

Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic8.9e-1530.94Show/hide
Query:  VSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLN-GPLPVPSVYNNIANENTG-TRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIG
        V + Q   T R ++  LV+  L G +  +   A+   +  GP P PS       +N+   R F   LK   Y+  +       R K+ A D++ +  LI 
Subjt:  VSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLN-GPLPVPSVYNNIANENTG-TRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIG

Query:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
        +    YV+  LR K++++ YD + +IS+  + EK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Subjt:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

Arabidopsis top hitse value%identityAlignment
AT3G01440.1 PsbQ-like 11.6e-6758.64Show/hide
Query:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTD--VSSHQISLTRRLALTSLVSVAL---FGNASPEIASANEYWLNGPLPVPSVYNNIANENTG
        MA   +LN   + +P+LPKL  + K  K +GF  ++T+       + +TRR+ L   VS+ L    G  +  +A  N +W++GPLP+P +YNNI NE TG
Subjt:  MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTD--VSSHQISLTRRLALTSLVSVAL---FGNASPEIASANEYWLNGPLPVPSVYNNIANENTG

Query:  TRSFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSE
        TR+F+K G+Y+A+IGT+GR YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAAA  +KQPL DLANRLFDNFEKLEDAAK KNL+E
Subjt:  TRSFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSE

Query:  TESYYQQTTPILQEVMDRMA
        TES Y+ T  +LQEVM RMA
Subjt:  TESYYQQTTPILQEVMDRMA

AT4G05180.1 photosystem II subunit Q-21.1e-1229.95Show/hide
Query:  LKKQTDVSSHQISLTRRLALTSLVSVALFGNA--SPEIASANEYWLNGPLPVPSVYNNIANENTGTRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLA
        ++ Q +VS  + S   R ++  LV+  L G +      A A    + GP P+PS      + +   R F   LK   YI  +       R K  A +++ 
Subjt:  LKKQTDVSSHQISLTRRLALTSLVSVALFGNA--SPEIASANEYWLNGPLPVPSVYNNIANENTGTRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLA

Query:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
        +   I K    YV+  LRL+++++ YD + VISA  + EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L  V+ ++
Subjt:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

AT4G21280.1 photosystem II subunit QA6.3e-1630.56Show/hide
Query:  VSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLN-GPLPVPSVYNNIANENTGTRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGK
        V + Q   T R ++  LV+  L G +  +   A+   +  GP P PS      + +   R F   LK   Y+  +       R K+ A D++ +  LI +
Subjt:  VSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLN-GPLPVPSVYNNIANENTGTRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGK

Query:  DTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
            YV+  LR K++++ YD + +IS+  + EK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Subjt:  DTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

AT4G21280.2 photosystem II subunit QA6.3e-1630.94Show/hide
Query:  VSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLN-GPLPVPSVYNNIANENTG-TRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIG
        V + Q   T R ++  LV+  L G +  +   A+   +  GP P PS       +N+   R F   LK   Y+  +       R K+ A D++ +  LI 
Subjt:  VSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLN-GPLPVPSVYNNIANENTG-TRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIG

Query:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
        +    YV+  LR K++++ YD + +IS+  + EK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Subjt:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTCTTGCAAATTTAAACGAGAAATTCTCCGCCATTCCCAACCTCCCGAAGCTTCAAAACACTCATAAGAGACTCAAAATTACTGGGTTTCTCAAGAAACAAAC
AGATGTCTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATCGCTTCTGCTAACGAGT
ACTGGCTCAACGGCCCTTTGCCTGTGCCTTCTGTTTACAACAACATCGCGAACGAGAACACGGGGACTCGGTCATTTCTGAAGACAGGGATATACATAGCTAACATAGGA
ACAGAAGGAAGAAAATACAGATTGAAGAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACGTTGAATTATGTTAGAAAGTATCTTCGACTCAA
ATCAACCTTCATGTACTACGACTTCGACAACGTTATCTCGGCAGCAGCAGAGGGTGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAACTTCGAAAAGC
TTGAAGATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTATCAACAGACAACACCAATACTTCAAGAAGTCATGGATAGAATGGCATAA
mRNA sequenceShow/hide mRNA sequence
CTGAAATTAGAAGCTCTGCTTCTTTCTGTTGCCAATTTCCTCCATTTCTCTTCTAAGTCTTTTCATCAAATGGCTCGTCTTGCAAATTTAAACGAGAAATTCTCCGCCAT
TCCCAACCTCCCGAAGCTTCAAAACACTCATAAGAGACTCAAAATTACTGGGTTTCTCAAGAAACAAACAGATGTCTCTTCTCATCAAATCTCATTGACAAGAAGATTGG
CTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATCGCTTCTGCTAACGAGTACTGGCTCAACGGCCCTTTGCCTGTGCCTTCTGTTTACAAC
AACATCGCGAACGAGAACACGGGGACTCGGTCATTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAGAAGGAAGAAAATACAGATTGAAGAAATATGCATTTGA
TCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACGTTGAATTATGTTAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTACGACTTCGACAACGTTATCTCGG
CAGCAGCAGAGGGTGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAACTTCGAAAAGCTTGAAGATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAA
TCCTACTATCAACAGACAACACCAATACTTCAAGAAGTCATGGATAGAATGGCATAAGTTCGAAAAAATTTATTGATCAGAAGATTTTGACGGATCTGCTTGCTTTTCTA
TCGTTTTTCTGTTCTTGTTCATAATTAGTTTCCATTTTTCATCTGTATGTCAATGCGGCTTAAAGATGCAAAATCAAGACAAACAGTGCAGTGAGTCACAAATTATAGTT
CAACTATTTGGGTTTTGTCTTAGAAGGAAAGGAGGACGATTGATATCGGGCAAACAAGGACAGACAATTTGCAGCATGCTTGGCACAATTACTGATGTTTAATTGTAAAA
CAAAAGTGAAGGGGAACAAAAACTCTTACTTTCATTGTTACAATCAGATCTCTTTTGCTATACACAACTAAGCCTAAGTCAGAATCATTCTCATATTTCATTATCAAATA
GTTGATTTGCCAATGTATAGGCAATGTTTGAGCATAAATCTTAAGGTCGTGTATTGGTTAGACGCCGAGGAGTACCAATCTCACAAGCATTAACCCGGGCAGCAAAGCGA
AGCGAGCAGAGTGATTCACTGGCCGAGGAGGAATCAGGAGAGATATTTACAAACATCAACGTCTTTGAATCTCCACCGAGACATGGCTG
Protein sequenceShow/hide protein sequence
MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIG
TEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA