; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G16780 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G16780
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description60S ribosomal protein L8
Genome locationClcChr05:24675888..24677838
RNA-Seq ExpressionClc05G16780
SyntenyClc05G16780
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR008991 - Translation protein SH3-like domain superfamily
IPR012340 - Nucleic acid-binding, OB-fold
IPR014722 - Ribosomal protein L2, domain 2
IPR014726 - Ribosomal protein L2, domain 3
IPR022666 - Ribosomal Proteins L2, RNA binding domain
IPR022669 - Ribosomal protein L2, C-terminal
IPR022671 - Ribosomal protein L2, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063480.1 60S ribosomal protein L8 [Cucumis melo var. makuwa]1.0e-14590.2Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSC--------------VCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRA
        VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSS               +C  S       SSQN+V  RIKLPSGAKKIVPSGCRA
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSC--------------VCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRA

Query:  MIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        MIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  MIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

KAG7015230.1 60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-14291.13Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+KADKA
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

XP_004151970.1 60S ribosomal protein L8 [Cucumis sativus]1.4e-14291.49Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLP+RAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

XP_008454581.1 PREDICTED: 60S ribosomal protein L8 [Cucumis melo]1.1e-14291.84Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

XP_022139448.1 60S ribosomal protein L8-like [Momordica charantia]2.4e-14291.81Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK
        LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK

TrEMBL top hitse value%identityAlignment
A0A0A0L7L1 Ribosomal_L2_C domain-containing protein6.8e-14391.49Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLP+RAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

A0A1S3BYI5 60S ribosomal protein L85.2e-14391.84Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

A0A5A7V8H5 60S ribosomal protein L85.0e-14690.2Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSC--------------VCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRA
        VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSS               +C  S       SSQN+V  RIKLPSGAKKIVPSGCRA
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSC--------------VCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRA

Query:  MIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        MIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  MIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

A0A6J1CFM0 60S ribosomal protein L8-like1.2e-14291.81Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK
        LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK

A0A6J1J2H3 60S ribosomal protein L81.5e-14291.13Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTS                      RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+KADKA
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

SwissProt top hitse value%identityAlignment
P25998 60S ribosomal protein L81.7e-13584.04Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGR+IRAQRKGAGSVF+SHTHHRKG ARFRSLDFGERNGYLKGV++E+IHDPGRGAPLARVTFR+PFRY HQKELF+AAEGMYTGQFVYCGKKA L+VGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLP+R+IPEGAVVCNVEH VGDRGVFARCSG YAIVISHNPDN T+                      RIKLPSG+KKIVPSGCR MIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        +LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLIA RRTGRLRGQAAATAAKADKA
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

P29766 60S ribosomal protein L84.4e-13985.82Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKG ARFR+LDFGERNGYLKGV++E+IHDPGRGAPLARVTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKA L+VGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLP+R+IPEGAVVCNVEH VGDRGVFARCSGDYAIVISHNPDN T+                      R+KLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        +LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQA ATAAKADKA
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

P46286 60S ribosomal protein L8-16.6e-13584.64Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLARVTFRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLP+R+IPEGAVVCNVEHHVGDRGV AR SGDYAIVI+HNPD+DT+                      RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        +LKAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAA+AAKAD
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

Q42064 60S ribosomal protein L8-35.9e-13684.64Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLARV FRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLP+R+IPEGAV+CNVEHHVGDRGVFAR SGDYAIVI+HNPDNDTS                      RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        +LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAARRTGRLRGQAAA A+KAD
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

Q4PSL7 60S ribosomal protein L8-25.4e-12176.51Show/hide
Query:  MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVG
        MGRVIRAQRKG AGSVF+SHTHHRKG A+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLARV FRHPFRY  QKELF+AAEGMYTGQ++YCGKKANL+VG
Subjt:  MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVG

Query:  NVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEK
        NVLP+ +IPEGAV+CNVE HVGDRG  AR SGDYAIVI+HNP+++T+                      R+KLPSG+KKI+PS CRAMIGQVAGGGRTEK
Subjt:  NVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEK

Query:  PLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        PLLKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IAARRTGR RG AA  AAKAD
Subjt:  PLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

Arabidopsis top hitse value%identityAlignment
AT2G18020.1 Ribosomal protein L2 family4.7e-13684.64Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLARVTFRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLP+R+IPEGAVVCNVEHHVGDRGV AR SGDYAIVI+HNPD+DT+                      RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        +LKAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAA+AAKAD
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

AT3G51190.1 Ribosomal protein L2 family3.8e-12276.51Show/hide
Query:  MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVG
        MGRVIRAQRKG AGSVF+SHTHHRKG A+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLARV FRHPFRY  QKELF+AAEGMYTGQ++YCGKKANL+VG
Subjt:  MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVG

Query:  NVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEK
        NVLP+ +IPEGAV+CNVE HVGDRG  AR SGDYAIVI+HNP+++T+                      R+KLPSG+KKI+PS CRAMIGQVAGGGRTEK
Subjt:  NVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEK

Query:  PLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        PLLKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IAARRTGR RG AA  AAKAD
Subjt:  PLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

AT4G36130.1 Ribosomal protein L2 family4.2e-13784.64Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLARV FRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP
        VLP+R+IPEGAV+CNVEHHVGDRGVFAR SGDYAIVI+HNPDNDTS                      RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP
Subjt:  VLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP

Query:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        +LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAARRTGRLRGQAAA A+KAD
Subjt:  LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

ATCG00830.1 ribosomal protein L22.1e-1928.96Show/hide
Query:  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH
        HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP+  +P G  + N+E  
Subjt:  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH

Query:  VGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW-
        +G  G  AR +G  A +I+    + T                        +KLPSG  +++   C A +GQV   G  +K L +AG+          CW 
Subjt:  VGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW-

Query:  ---PKVRGVAMNPVEHPHGGG
           P VRGV MNPV+HPHGGG
Subjt:  ---PKVRGVAMNPVEHPHGGG

ATCG01310.1 ribosomal protein L22.1e-1928.96Show/hide
Query:  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH
        HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP+  +P G  + N+E  
Subjt:  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH

Query:  VGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW-
        +G  G  AR +G  A +I+    + T                        +KLPSG  +++   C A +GQV   G  +K L +AG+          CW 
Subjt:  VGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW-

Query:  ---PKVRGVAMNPVEHPHGGG
           P VRGV MNPV+HPHGGG
Subjt:  ---PKVRGVAMNPVEHPHGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGTGTTATCAGAGCACAACGTAAGGGAGCTGGATCAGTCTTCCGCTCTCACACTCACCACAGGAAGGGCGCTGCCCGTTTCCGCTCCCTCGACTTCGGCGAGCG
AAATGGTTACCTGAAAGGTGTGGTCAGCGAAATCATTCACGATCCGGGCAGAGGTGCTCCGTTGGCCCGCGTTACTTTCCGCCATCCCTTCCGTTACAAGCACCAGAAGG
AACTGTTCATCGCCGCTGAGGGTATGTACACTGGTCAGTTTGTGTACTGTGGGAAAAAGGCTAATCTTGTTGTTGGTAATGTGCTTCCCATTAGAGCCATTCCTGAAGGT
GCTGTGGTTTGTAATGTTGAGCACCATGTTGGTGACCGAGGTGTGTTCGCTAGGTGCTCTGGTGATTATGCTATTGTTATCAGCCACAACCCAGATAATGATACCAGCAG
TTGTGTTTGTTTCAATTCAATTCTTACTATGGCGATGCCTTCATCTCAAAATGCTGTCCCACGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCTAGCGGGT
GCCGTGCTATGATTGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTCAAGGCAGGTAATGCTTACCACAAGTTCCGTGTCAAGCGTAACTGCTGGCCCAAG
GTACGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAACACATTGGTCACGCCAGTACTGTCCGCCGTGATGCCCCGCCTGGTCAAAAGGT
TGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGAGGACAGGCTGCTGCTACTGCTGCCAAGGCCGACAAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
TCCTAAACCTGTATCCAAACACGCTATCTAGGGCAACCCATTAGTCATCTTCCTTTTCTCCTCTAAAAACCCTAATCCTCTTTCTATTTATCATAACACCGCCTGCGCCT
CTCTTCCCCTTCCCCTTCCCCATATCTCCGAAAACCCTAATTCCCATCCTCCAATGGGTCGTGTTATCAGAGCACAACGTAAGGGAGCTGGATCAGTCTTCCGCTCTCAC
ACTCACCACAGGAAGGGCGCTGCCCGTTTCCGCTCCCTCGACTTCGGCGAGCGAAATGGTTACCTGAAAGGTGTGGTCAGCGAAATCATTCACGATCCGGGCAGAGGTGC
TCCGTTGGCCCGCGTTACTTTCCGCCATCCCTTCCGTTACAAGCACCAGAAGGAACTGTTCATCGCCGCTGAGGGTATGTACACTGGTCAGTTTGTGTACTGTGGGAAAA
AGGCTAATCTTGTTGTTGGTAATGTGCTTCCCATTAGAGCCATTCCTGAAGGTGCTGTGGTTTGTAATGTTGAGCACCATGTTGGTGACCGAGGTGTGTTCGCTAGGTGC
TCTGGTGATTATGCTATTGTTATCAGCCACAACCCAGATAATGATACCAGCAGTTGTGTTTGTTTCAATTCAATTCTTACTATGGCGATGCCTTCATCTCAAAATGCTGT
CCCACGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCTAGCGGGTGCCGTGCTATGATTGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTCA
AGGCAGGTAATGCTTACCACAAGTTCCGTGTCAAGCGTAACTGCTGGCCCAAGGTACGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAA
CACATTGGTCACGCCAGTACTGTCCGCCGTGATGCCCCGCCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGAGGACAGGCTGCTGCTACTGC
TGCCAAGGCCGACAAGGCTTAG
Protein sequenceShow/hide protein sequence
MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEG
AVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSSCVCFNSILTMAMPSSQNAVPRRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPK
VRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA