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Clc05G16870 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G16870
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:24978068..24978623
RNA-Seq ExpressionClc05G16870
SyntenyClc05G16870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650712.1 hypothetical protein Csa_009895 [Cucumis sativus]1.9e-0773.68Show/hide
Query:  IGEAGHNVDDDPFVGGKHAWNEVRVDMRLISFMGMGID
        +G+AGHN  DDPFVGGKHAWNE+RVDMR ISF+ M  D
Subjt:  IGEAGHNVDDDPFVGGKHAWNEVRVDMRLISFMGMGID
XP_038896213.1 uncharacterized protein LOC120084489 [Benincasa hispida]1.7e-0863.16Show/hide
Query:  ILLPFTYLMSGNCIGEAGHNVD--DDPFVGGKHAWNEVRVDMRLISFMGMGIDVEIG
        I + F  L   +C  +AGHN D  DDPFVGGKHAWNEVRVDM  ISFM M  D EIG
Subjt:  ILLPFTYLMSGNCIGEAGHNVD--DDPFVGGKHAWNEVRVDMRLISFMGMGIDVEIG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGAAGCTTTTCTTTTGTTAGTCCCCCAGCCGGCTTTGAGATACTGTTACCATTTACTTATTTAATGTCAGGTAATTGCATAGGGGAGGCAGGCCATAATGTTGA
TGATGATCCTTTTGTCGGGGGAAAACATGCATGGAATGAAGTACGTGTCGATATGAGGCTAATTAGCTTCATGGGAATGGGAATAGATGTAGAGATTGGAAGGCATTGCA
GAAATAATTGCAGAAATAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAGAAGCTTTTCTTTTGTTAGTCCCCCAGCCGGCTTTGAGATACTGTTACCATTTACTTATTTAATGTCAGGTAATTGCATAGGGGAGGCAGGCCATAATGTTGA
TGATGATCCTTTTGTCGGGGGAAAACATGCATGGAATGAAGTACGTGTCGATATGAGGCTAATTAGCTTCATGGGAATGGGAATAGATGTAGAGATTGGAAGGCATTGCA
GAAATAATTGCAGAAATAATTAA
Protein sequenceShow/hide protein sequence
MSRSFSFVSPPAGFEILLPFTYLMSGNCIGEAGHNVDDDPFVGGKHAWNEVRVDMRLISFMGMGIDVEIGRHCRNNCRNN