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Clc05G16875 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G16875
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:24979292..24980021
RNA-Seq ExpressionClc05G16875
SyntenyClc05G16875
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592004.1 hypothetical protein SDJN03_14350, partial [Cucurbita argyrosperma subsp. sororia]4.6e-2592.19Show/hide
Query:  CSCCKDPLAILSSDKKRWAERKQKQILYEFQALSLAMENRCFGITKPFLVTFMIFKSLFGPSCQ
        CSCCKDPL ILSSDKKRWAER QKQILYEFQALSLAMENRCFGITK FLV FMIFKS FGPSCQ
Subjt:  CSCCKDPLAILSSDKKRWAERKQKQILYEFQALSLAMENRCFGITKPFLVTFMIFKSLFGPSCQ
KAG7024879.1 hypothetical protein SDJN02_13698, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2674.16Show/hide
Query:  CPSCIYDFYHNLKRDTFLAYLWSSRCSCCKDPLAILSSDKKRWAERKQKQILYEFQALSLAMENRCFGITKPFLVTFMIFKSLFGPSCQ
        C    Y+    LK  T L    S  CSCCKDPL ILSSDKKRWAER QKQILYEFQALSLAMENRCFGITK FLV FMIFKS FGPSCQ
Subjt:  CPSCIYDFYHNLKRDTFLAYLWSSRCSCCKDPLAILSSDKKRWAERKQKQILYEFQALSLAMENRCFGITKPFLVTFMIFKSLFGPSCQ
XP_038896213.1 uncharacterized protein LOC120084489 [Benincasa hispida]1.4e-2695.31Show/hide
Query:  CSCCKDPLAILSSDKKRWAERKQKQILYEFQALSLAMENRCFGITKPFLVTFMIFKSLFGPSCQ
        CSCCKDPLAILSSDKKRWAER QK ILYEFQALSLAMENRCFGITKPFLV FMIFKSLFGPSCQ
Subjt:  CSCCKDPLAILSSDKKRWAERKQKQILYEFQALSLAMENRCFGITKPFLVTFMIFKSLFGPSCQ
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTTTAATATGCCCTTCTTGTATATATGATTTTTATCATAATCTAAAAAGAGATACTTTTCTTGCGTACTTGTGGTCAAGCAGGTGTTCGTGCTGTAAGGACCC
ACTGGCTATCCTATCAAGCGACAAGAAGCGATGGGCTGAAAGGAAACAGAAACAAATATTATATGAATTCCAAGCACTTAGCTTAGCGATGGAAAATCGTTGCTTTGGAA
TCACAAAACCCTTTCTTGTCACCTTCATGATTTTTAAATCTCTTTTTGGTCCATCATGTCAGGAATTGTTCCTTAGTTGGTATTCGGTTTGGCCTAGGGACTCATCATTA
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTTTAATATGCCCTTCTTGTATATATGATTTTTATCATAATCTAAAAAGAGATACTTTTCTTGCGTACTTGTGGTCAAGCAGGTGTTCGTGCTGTAAGGACCC
ACTGGCTATCCTATCAAGCGACAAGAAGCGATGGGCTGAAAGGAAACAGAAACAAATATTATATGAATTCCAAGCACTTAGCTTAGCGATGGAAAATCGTTGCTTTGGAA
TCACAAAACCCTTTCTTGTCACCTTCATGATTTTTAAATCTCTTTTTGGTCCATCATGTCAGGAATTGTTCCTTAGTTGGTATTCGGTTTGGCCTAGGGACTCATCATTA
TAG
Protein sequenceShow/hide protein sequence
MEALICPSCIYDFYHNLKRDTFLAYLWSSRCSCCKDPLAILSSDKKRWAERKQKQILYEFQALSLAMENRCFGITKPFLVTFMIFKSLFGPSCQELFLSWYSVWPRDSSL