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Clc05G16980 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G16980
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:25320031..25320989
RNA-Seq ExpressionClc05G16980
SyntenyClc05G16980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591234.1 4-coumarate--CoA ligase-like 5, partial [Cucurbita argyrosperma subsp. sororia]4.3e-1177.27Show/hide
Query:  GHSPSGRSRSFWKPFSHNSSAVLPHPFIAFGKFRSCDWIESKSD
        GH PSGRSRSFWKP S+N+SAVLP PF++FGK  SCDWIES SD
Subjt:  GHSPSGRSRSFWKPFSHNSSAVLPHPFIAFGKFRSCDWIESKSD
KAG6608623.1 4-coumarate--CoA ligase-like 5, partial [Cucurbita argyrosperma subsp. sororia]4.9e-1559.49Show/hide
Query:  LRDKGHSPSGRSRSFWKPFSHNSSAVLPHPFIAFG-KFRSCDWIESKSDYKRFRRCSIVILDDIHFHRCRFLFPFLVLF
        ++ KG     +SRSFWK FS  +SA+LP  +I F  K + CDW+ S SD KRFRR SIVILDDIH  RCRFLFP LV F
Subjt:  LRDKGHSPSGRSRSFWKPFSHNSSAVLPHPFIAFG-KFRSCDWIESKSDYKRFRRCSIVILDDIHFHRCRFLFPFLVLF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTACCCTCCCCGTCCCTGTTCCGACCCCGGACGGCGCAAACGGGAAACAGCCCTGACTCGCGAGCACGGCTTAAGCAAAACACCATTTCATAATTGTTCATTATT
ACCAAATAGAAGCTGTCGAGAAAAATATTTATCTCAAAACGCACCGTTTTGGCGCCCTTCTTCTCTCAGCTCCGGGTCCGTTCTTCATTTTCCGTTCTTAAGAGATAAAG
GCCATTCGCCGTCGGGAAGGTCTAGATCTTTCTGGAAGCCATTTTCACATAACTCCTCCGCTGTTCTGCCCCACCCCTTCATCGCCTTCGGAAAATTCCGGTCCTGTGAT
TGGATTGAATCGAAATCCGACTACAAAAGATTTCGCCGGTGCTCTATTGTGATTCTCGACGACATTCATTTCCATCGGTGCCGGTTCTTGTTTCCGTTTCTTGTACTATT
TTCTCGTCTGAAGAGGTACGTTTTTCGTTGTAGCTTCCGAAAACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTACCCTCCCCGTCCCTGTTCCGACCCCGGACGGCGCAAACGGGAAACAGCCCTGACTCGCGAGCACGGCTTAAGCAAAACACCATTTCATAATTGTTCATTATT
ACCAAATAGAAGCTGTCGAGAAAAATATTTATCTCAAAACGCACCGTTTTGGCGCCCTTCTTCTCTCAGCTCCGGGTCCGTTCTTCATTTTCCGTTCTTAAGAGATAAAG
GCCATTCGCCGTCGGGAAGGTCTAGATCTTTCTGGAAGCCATTTTCACATAACTCCTCCGCTGTTCTGCCCCACCCCTTCATCGCCTTCGGAAAATTCCGGTCCTGTGAT
TGGATTGAATCGAAATCCGACTACAAAAGATTTCGCCGGTGCTCTATTGTGATTCTCGACGACATTCATTTCCATCGGTGCCGGTTCTTGTTTCCGTTTCTTGTACTATT
TTCTCGTCTGAAGAGGTACGTTTTTCGTTGTAGCTTCCGAAAACCCTAG
Protein sequenceShow/hide protein sequence
MGYPPRPCSDPGRRKRETALTREHGLSKTPFHNCSLLPNRSCREKYLSQNAPFWRPSSLSSGSVLHFPFLRDKGHSPSGRSRSFWKPFSHNSSAVLPHPFIAFGKFRSCD
WIESKSDYKRFRRCSIVILDDIHFHRCRFLFPFLVLFSRLKRYVFRCSFRKP