| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0040138.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.6e-22 | 45.67 | Show/hide |
Query: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTSKSWNLS
+ DPK LP + +K ++EE Y L+LNI DNV+ +VI+E+ +++C + ALY +KDLP+K+++RE+LFSFKMN +KT++ENLDEFKKLT++ L
Subjt: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTSKSWNLS
Query: LKLKLKLLAVEEALFSKGKNNYYKKNK
KL+ + E A+F ++ YK+ K
Subjt: LKLKLKLLAVEEALFSKGKNNYYKKNK
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| KAA0051442.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 8.4e-24 | 34.47 | Show/hide |
Query: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS------
L+DPK LP LT E+ +EEVAY TL++NI DNV+ +VI+E+ + +LY +KDLPNK+F++E+LFSFK N K +DENLDEFKKLT+
Subjt: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS------
Query: --------------------KSWNLSLKLKLKLLAVEEALFS-KGK----NNYYKKNKFVKGQRFHKSKASLKFFNCHKGYFKRNYPELKRKPDKKSKEH
K LK + + V + + K K K + +G+ F + + + ++ + F RN +R+ ++ +EH
Subjt: --------------------KSWNLSLKLKLKLLAVEEALFS-KGK----NNYYKKNKFVKGQRFHKSKASLKFFNCHKGYFKRNYPELKRKPDKKSKEH
Query: SKADFSIGDEGYDYTEVLAANNEKTMTERTKERKI
+ +G+E ++YTEVLAA N+K M T+E +
Subjt: SKADFSIGDEGYDYTEVLAANNEKTMTERTKERKI
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| KAA0060284.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 5.5e-23 | 36.32 | Show/hide |
Query: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTSKSWNLS
L+DPK L LT E+ +EEVAY TL++NI +NV+ ++I+E+ + +LY +KDLPNK+F+R++LFSFKMN K +DE LDEFKKLT+
Subjt: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTSKSWNLS
Query: LKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHKGYFKRNYPELKRKPDKKSKEHSKADFSIGDEGYDYTEVLAANNEKTMTERTK
KL+++ E A+ ++ YK + K +LK K ++ +EH +G++ ++YTEVLA N+K M T+
Subjt: LKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHKGYFKRNYPELKRKPDKKSKEHSKADFSIGDEGYDYTEVLAANNEKTMTERTK
Query: E
E
Subjt: E
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| TYK12279.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | 1.1e-20 | 33.88 | Show/hide |
Query: EVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS-------------------------------------------
+VI+E+ + +LY +KDLPNK+F+RE+LFSFKMN K +DENLDEFKK T+
Subjt: EVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS-------------------------------------------
Query: -----KSWNLSLKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHK-GYFKRNYPE--------------------------LKRKP
KS L LK + K E+LFSKGKN++ K N K QR K K +LK F CHK G+FKRN P+ +R+
Subjt: -----KSWNLSLKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHK-GYFKRNYPE--------------------------LKRKP
Query: DKKSKEHSKADFSIGDEGYDYTEVLAANNEKTMTERTKERKIWCL
++ +EH + +G+E ++YTEVL A N+K M T+E W L
Subjt: DKKSKEHSKADFSIGDEGYDYTEVLAANNEKTMTERTKERKIWCL
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| TYK27723.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-29 | 35.34 | Show/hide |
Query: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS------
L+DPK LP LT E+ +EEVAY TL++NI DNV+ +VI+E+ +LY +KDL NK+F+RE+LFSFKMN K +DENLDEFKKLT+
Subjt: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS------
Query: -------------------------------------------KSWNLSLKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHK-GY
KS L LK + K E+LFSKG N++ K + K QR + K +LK F CHK G+
Subjt: -------------------------------------------KSWNLSLKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHK-GY
Query: FKRNYPE----LKRKPDKKSKEHSKADFS----------------------IGDEGYDYTEVLAANNEKTMTERTKERKIWCL
FKRN P+ +R +++ + + + DF+ +G+E ++YT+VLAA N++ M E E + W L
Subjt: FKRNYPE----LKRKPDKKSKEHSKADFS----------------------IGDEGYDYTEVLAANNEKTMTERTKERKIWCL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TAZ3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-22 | 45.67 | Show/hide |
Query: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTSKSWNLS
+ DPK LP + +K ++EE Y L+LNI DNV+ +VI+E+ +++C + ALY +KDLP+K+++RE+LFSFKMN +KT++ENLDEFKKLT++ L
Subjt: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTSKSWNLS
Query: LKLKLKLLAVEEALFSKGKNNYYKKNK
KL+ + E A+F ++ YK+ K
Subjt: LKLKLKLLAVEEALFSKGKNNYYKKNK
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| A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.1e-24 | 34.47 | Show/hide |
Query: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS------
L+DPK LP LT E+ +EEVAY TL++NI DNV+ +VI+E+ + +LY +KDLPNK+F++E+LFSFK N K +DENLDEFKKLT+
Subjt: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS------
Query: --------------------KSWNLSLKLKLKLLAVEEALFS-KGK----NNYYKKNKFVKGQRFHKSKASLKFFNCHKGYFKRNYPELKRKPDKKSKEH
K LK + + V + + K K K + +G+ F + + + ++ + F RN +R+ ++ +EH
Subjt: --------------------KSWNLSLKLKLKLLAVEEALFS-KGK----NNYYKKNKFVKGQRFHKSKASLKFFNCHKGYFKRNYPELKRKPDKKSKEH
Query: SKADFSIGDEGYDYTEVLAANNEKTMTERTKERKI
+ +G+E ++YTEVLAA N+K M T+E +
Subjt: SKADFSIGDEGYDYTEVLAANNEKTMTERTKERKI
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| A0A5A7UZ07 Retrotransposon protein, putative, Ty1-copia subclass | 2.6e-23 | 36.32 | Show/hide |
Query: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTSKSWNLS
L+DPK L LT E+ +EEVAY TL++NI +NV+ ++I+E+ + +LY +KDLPNK+F+R++LFSFKMN K +DE LDEFKKLT+
Subjt: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTSKSWNLS
Query: LKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHKGYFKRNYPELKRKPDKKSKEHSKADFSIGDEGYDYTEVLAANNEKTMTERTK
KL+++ E A+ ++ YK + K +LK K ++ +EH +G++ ++YTEVLA N+K M T+
Subjt: LKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHKGYFKRNYPELKRKPDKKSKEHSKADFSIGDEGYDYTEVLAANNEKTMTERTK
Query: E
E
Subjt: E
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| A0A5D3CPM8 Pentatricopeptide repeat-containing protein | 5.5e-21 | 33.88 | Show/hide |
Query: EVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS-------------------------------------------
+VI+E+ + +LY +KDLPNK+F+RE+LFSFKMN K +DENLDEFKK T+
Subjt: EVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS-------------------------------------------
Query: -----KSWNLSLKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHK-GYFKRNYPE--------------------------LKRKP
KS L LK + K E+LFSKGKN++ K N K QR K K +LK F CHK G+FKRN P+ +R+
Subjt: -----KSWNLSLKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHK-GYFKRNYPE--------------------------LKRKP
Query: DKKSKEHSKADFSIGDEGYDYTEVLAANNEKTMTERTKERKIWCL
++ +EH + +G+E ++YTEVL A N+K M T+E W L
Subjt: DKKSKEHSKADFSIGDEGYDYTEVLAANNEKTMTERTKERKIWCL
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| A0A5D3DVM0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.5e-30 | 35.34 | Show/hide |
Query: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS------
L+DPK LP LT E+ +EEVAY TL++NI DNV+ +VI+E+ +LY +KDL NK+F+RE+LFSFKMN K +DENLDEFKKLT+
Subjt: LDDPKTLPRNLTAEEKPNIEEVAYRTLMLNIYDNVMGEVIDESCVHDVCNRFHALYVRKDLPNKIFLRERLFSFKMNATKTMDENLDEFKKLTS------
Query: -------------------------------------------KSWNLSLKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHK-GY
KS L LK + K E+LFSKG N++ K + K QR + K +LK F CHK G+
Subjt: -------------------------------------------KSWNLSLKLKLKLLAVEEALFSKGKNNYYKKNKFVKGQRFHKSKASLKFFNCHK-GY
Query: FKRNYPE----LKRKPDKKSKEHSKADFS----------------------IGDEGYDYTEVLAANNEKTMTERTKERKIWCL
FKRN P+ +R +++ + + + DF+ +G+E ++YT+VLAA N++ M E E + W L
Subjt: FKRNYPE----LKRKPDKKSKEHSKADFS----------------------IGDEGYDYTEVLAANNEKTMTERTKERKIWCL
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