; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G17090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G17090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionhigh mobility group B protein 9
Genome locationClcChr05:25471084..25473234
RNA-Seq ExpressionClc05G17090
SyntenyClc05G17090
Gene Ontology termsGO:0010197 - polar nucleus fusion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001606 - ARID DNA-binding domain
IPR009071 - High mobility group box domain
IPR036431 - ARID DNA-binding domain superfamily
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145526.1 high mobility group B protein 9 [Cucumis sativus]3.3e-14479.94Show/hide
Query:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------
        MSPPARTK+WNGGLDKHYPP L THDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE+                       
Subjt:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------

Query:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
                                 P   PQAPF FGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QPPP
Subjt:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP

Query:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGR+R+SGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDVDGANYSKHGD
        LKEYKEKMR  T+VDGANYSKHGD
Subjt:  LKEYKEKMRQATDVDGANYSKHGD

XP_008452910.1 PREDICTED: high mobility group B protein 9 [Cucumis melo]1.9e-14781.48Show/hide
Query:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------
        MSPPARTK+WNGGLDKHYPPPL THDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE+                       
Subjt:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------

Query:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
                                 P   PQAPFSFGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
Subjt:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP

Query:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGRHR+SGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDVDGANYSKHGD
        LKEYKEKMR  TDVDGANYSKHGD
Subjt:  LKEYKEKMRQATDVDGANYSKHGD

XP_022140929.1 high mobility group B protein 9 [Momordica charantia]5.4e-13978.4Show/hide
Query:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------
        MSPPAR+KSWN G DKHYP  L THDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE+                       
Subjt:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------

Query:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
                                 P   PQAPFSFGSP+SENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP P
Subjt:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP

Query:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        S+LRPQS NAIVPYTGGR R+SGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKRE
Subjt:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDVDGANYSKHGD
        LKEYKEKMRQATD+   NYSKHG+
Subjt:  LKEYKEKMRQATDVDGANYSKHGD

XP_022975460.1 high mobility group B protein 9 isoform X2 [Cucurbita maxima]5.4e-13978.46Show/hide
Query:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------
        MSPPARTKS NGG+DK YPPPL THDEV+SDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE+                       
Subjt:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------

Query:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
                                 P  +PQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHPE+P P
Subjt:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP

Query:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRPQ TNAIVPYTG RHR+SGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
Subjt:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQAT-DVDGANYSKHGD
        LKEYKEKMR A+ DV  ANYSK G+
Subjt:  LKEYKEKMRQAT-DVDGANYSKHGD

XP_038899499.1 high mobility group B protein 9-like [Benincasa hispida]1.6e-14380.25Show/hide
Query:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------
        MSPPA TKSWNGGLDKHYPPPL THDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE+                       
Subjt:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------

Query:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
                                 P   PQAPF  GSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSE+LRGVLYHPEQPPP
Subjt:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP

Query:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRPQSTNAIVPYTGGR+R+SGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKRE
Subjt:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDVDGANYSKHGD
        LKEYKEKMRQA+DVDG  YSKHG+
Subjt:  LKEYKEKMRQATDVDGANYSKHGD

TrEMBL top hitse value%identityAlignment
A0A0A0L181 Uncharacterized protein1.6e-14479.94Show/hide
Query:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------
        MSPPARTK+WNGGLDKHYPP L THDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE+                       
Subjt:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------

Query:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
                                 P   PQAPF FGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QPPP
Subjt:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP

Query:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGR+R+SGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDVDGANYSKHGD
        LKEYKEKMR  T+VDGANYSKHGD
Subjt:  LKEYKEKMRQATDVDGANYSKHGD

A0A1S3BUE9 high mobility group B protein 99.0e-14881.48Show/hide
Query:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------
        MSPPARTK+WNGGLDKHYPPPL THDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE+                       
Subjt:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------

Query:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
                                 P   PQAPFSFGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
Subjt:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP

Query:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGRHR+SGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDVDGANYSKHGD
        LKEYKEKMR  TDVDGANYSKHGD
Subjt:  LKEYKEKMRQATDVDGANYSKHGD

A0A5A7VAK3 High mobility group B protein 99.0e-14881.48Show/hide
Query:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------
        MSPPARTK+WNGGLDKHYPPPL THDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE+                       
Subjt:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------

Query:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
                                 P   PQAPFSFGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
Subjt:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP

Query:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGRHR+SGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDVDGANYSKHGD
        LKEYKEKMR  TDVDGANYSKHGD
Subjt:  LKEYKEKMRQATDVDGANYSKHGD

A0A6J1IGS2 high mobility group B protein 9 isoform X22.6e-13978.46Show/hide
Query:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------
        MSPPARTKS NGG+DK YPPPL THDEV+SDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE+                       
Subjt:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------

Query:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
                                 P  +PQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHPE+P P
Subjt:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP

Query:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRPQ TNAIVPYTG RHR+SGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
Subjt:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQAT-DVDGANYSKHGD
        LKEYKEKMR A+ DV  ANYSK G+
Subjt:  LKEYKEKMRQAT-DVDGANYSKHGD

E5GCD0 High mobility group family9.0e-14881.48Show/hide
Query:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------
        MSPPARTK+WNGGLDKHYPPPL THDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE+                       
Subjt:  MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHER-----------------------

Query:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
                                 P   PQAPFSFGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP
Subjt:  ------------------------APSVSPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPP

Query:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGRHR+SGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDVDGANYSKHGD
        LKEYKEKMR  TDVDGANYSKHGD
Subjt:  LKEYKEKMRQATDVDGANYSKHGD

SwissProt top hitse value%identityAlignment
P87057 Non-histone chromosomal protein 63.9e-0740Show/hide
Query:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNRE-REFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKM
        R  +S RK DPN PK N S + FF  E   K+K+  P+    +   ++G+ W  L+  ER  Y+    +DKERY+RE KEY  K+
Subjt:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNRE-REFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKM

Q9LG02 Putative high mobility group B protein 111.2e-2729.87Show/hide
Query:  PARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHERA----------------PSVSPQA--
        PA   + +  +  H       + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L++EVT RGG E+                  +++  A  
Subjt:  PARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHERA----------------PSVSPQA--

Query:  --------------PFSFGSPTS---ENELALVEYTPKTT-----SFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPPSDLRPQSTNA
                       + F +P S   E E AL     K+      S    P   +TG IDGKF+ GYL++ K+GSE L+G+LYH        + P++   
Subjt:  --------------PFSFGSPTS---ENELALVEYTPKTT-----SFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPPSDLRPQSTNA

Query:  IVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKM
                    G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W NLS  +R VY     +D +RYK E+ +Y+  M
Subjt:  IVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKM

Q9LTT3 High mobility group B protein 107.3e-3837.91Show/hide
Query:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHERAPS----VSPQAPFSFGSPTSENELALVEYTPK--------------
        +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG ER             FSF +  +     L +Y  K              
Subjt:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHERAPS----VSPQAPFSFGSPTSENELALVEYTPK--------------

Query:  -------------TTSFSPGPPA---------EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPPPSDLRPQSTNAIVPYTGGRHRYSGRRHRRSR
                       + SP P           EV G IDGKFD GYLVT+KLGS+ L+GVLYH P+ P  S    ++ +AIV       + S RRHR+  
Subjt:  -------------TTSFSPGPPA---------EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPPPSDLRPQSTNAIVPYTGGRHRYSGRRHRRSR

Query:  RKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
        +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Subjt:  RKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

Q9MAT6 High mobility group B protein 155.1e-4736.02Show/hide
Query:  PLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGG----------------------------------------------
        P  T++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG                                              
Subjt:  PLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGG----------------------------------------------

Query:  ---HERAPSVSPQAP-----FSFGSPTSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPPPSDLRPQ
           + + P  S Q+P     F  G+     EL  + +TP+    T  F  G  A   V G IDGKF+ GYLVTV +GSE L+GVLY    Q   S   PQ
Subjt:  ---HERAPSVSPQAP-----FSFGSPTSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPPPSDLRPQ

Query:  STNAIVPYT-----------GGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE
         ++ ++P T           GG  +   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+++YQ   ++DKE
Subjt:  STNAIVPYT-----------GGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE

Query:  RYKRELKEYKEKMRQATDVDGA
        RY+ E+++Y+EK +    +  A
Subjt:  RYKRELKEYKEKMRQATDVDGA

Q9SGS2 High mobility group B protein 99.2e-8156.07Show/hide
Query:  KHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE---------------------------------------
        K YP PL  H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+E                                       
Subjt:  KHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE---------------------------------------

Query:  --------RAPSVSPQAPFSFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPPSDLRPQS-
                R P + P A F   +P++  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS   P + 
Subjt:  --------RAPSVSPQAPFSFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPPSDLRPQS-

Query:  -TNAIVPY--TGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEY
          NA+VPY  TG R R  G+R RRSRR+ DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EERMVYQ+IGLKDKERY+REL EY
Subjt:  -TNAIVPY--TGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEY

Query:  KEKMR
        +E +R
Subjt:  KEKMR

Arabidopsis top hitse value%identityAlignment
AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain3.6e-4836.02Show/hide
Query:  PLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGG----------------------------------------------
        P  T++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG                                              
Subjt:  PLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGG----------------------------------------------

Query:  ---HERAPSVSPQAP-----FSFGSPTSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPPPSDLRPQ
           + + P  S Q+P     F  G+     EL  + +TP+    T  F  G  A   V G IDGKF+ GYLVTV +GSE L+GVLY    Q   S   PQ
Subjt:  ---HERAPSVSPQAP-----FSFGSPTSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPPPSDLRPQ

Query:  STNAIVPYT-----------GGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE
         ++ ++P T           GG  +   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+++YQ   ++DKE
Subjt:  STNAIVPYT-----------GGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE

Query:  RYKRELKEYKEKMRQATDVDGA
        RY+ E+++Y+EK +    +  A
Subjt:  RYKRELKEYKEKMRQATDVDGA

AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain8.4e-2929.87Show/hide
Query:  PARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHERA----------------PSVSPQA--
        PA   + +  +  H       + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L++EVT RGG E+                  +++  A  
Subjt:  PARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHERA----------------PSVSPQA--

Query:  --------------PFSFGSPTS---ENELALVEYTPKTT-----SFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPPSDLRPQSTNA
                       + F +P S   E E AL     K+      S    P   +TG IDGKF+ GYL++ K+GSE L+G+LYH        + P++   
Subjt:  --------------PFSFGSPTS---ENELALVEYTPKTT-----SFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPPSDLRPQSTNA

Query:  IVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKM
                    G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W NLS  +R VY     +D +RYK E+ +Y+  M
Subjt:  IVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKM

AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain6.5e-8256.07Show/hide
Query:  KHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE---------------------------------------
        K YP PL  H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+E                                       
Subjt:  KHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHE---------------------------------------

Query:  --------RAPSVSPQAPFSFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPPSDLRPQS-
                R P + P A F   +P++  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS   P + 
Subjt:  --------RAPSVSPQAPFSFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPPSDLRPQS-

Query:  -TNAIVPY--TGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEY
          NA+VPY  TG R R  G+R RRSRR+ DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EERMVYQ+IGLKDKERY+REL EY
Subjt:  -TNAIVPY--TGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEY

Query:  KEKMR
        +E +R
Subjt:  KEKMR

AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain5.2e-3937.91Show/hide
Query:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHERAPS----VSPQAPFSFGSPTSENELALVEYTPK--------------
        +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG ER             FSF +  +     L +Y  K              
Subjt:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHERAPS----VSPQAPFSFGSPTSENELALVEYTPK--------------

Query:  -------------TTSFSPGPPA---------EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPPPSDLRPQSTNAIVPYTGGRHRYSGRRHRRSR
                       + SP P           EV G IDGKFD GYLVT+KLGS+ L+GVLYH P+ P  S    ++ +AIV       + S RRHR+  
Subjt:  -------------TTSFSPGPPA---------EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPPPSDLRPQSTNAIVPYTGGRHRYSGRRHRRSR

Query:  RKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
        +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Subjt:  RKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

AT3G28730.1 high mobility group3.4e-0631.96Show/hide
Query:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATDVDGANYS
        + ++ ++K DPN PK   SG+ FF   +   +K  +P     E  K++G+ W  +S +++  Y+     DK+RYK E+ +YK    Q  +VD  N S
Subjt:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATDVDGANYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCGCCGGCCAGGACCAAAAGCTGGAACGGCGGCCTCGATAAACACTACCCTCCACCGCTCACCACCCACGATGAAGTTATTTCCGACCCCATTGTTTTTTGGGA
CACGTTGAGGCGTTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGACTTGCATGTTTTATATTCAGAAGTCACAAGAAGAGGAG
GACATGAAAGGGCCCCATCTGTGTCCCCTCAAGCGCCATTTTCTTTCGGTAGCCCTACCAGTGAAAACGAATTGGCTCTTGTGGAATATACCCCCAAAACTACGTCGTTT
TCGCCTGGTCCGCCTGCTGAAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTGGTGACTGTGAAATTGGGATCTGAGGTTCTAAGAGGAGTTCTTTACCA
TCCAGAGCAGCCACCTCCCTCGGATCTCCGGCCTCAGTCTACCAATGCCATTGTACCGTATACCGGCGGCAGACATCGATATTCTGGTAGGCGGCACCGGAGGAGCCGGA
GAAAGGGAGATCCGAACCACCCAAAACCAAACAGAAGTGGGTATAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAAAGGGAGTTC
ACTAAGATGATTGGAGAGTCTTGGAACAATCTTAGCCCTGAAGAAAGGATGGTTTATCAAAACATTGGGTTGAAAGACAAGGAAAGATACAAGCGAGAGTTGAAAGAGTA
TAAGGAGAAAATGAGGCAGGCAACCGATGTTGATGGAGCTAACTATTCAAAACATGGGGACTAG
mRNA sequenceShow/hide mRNA sequence
CTTTAATACCATCATTACTTTTTTTGTTTTCTCTTTCCATTCTACACCGCACTCTCTCTCTCTCCCTCTCTCTTTCCTTCTTCTTCTTCTTCTTCCTTTCTCTGATTTTT
CCGGCCATGTCACCGCCGGCCAGGACCAAAAGCTGGAACGGCGGCCTCGATAAACACTACCCTCCACCGCTCACCACCCACGATGAAGTTATTTCCGACCCCATTGTTTT
TTGGGACACGTTGAGGCGTTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGACTTGCATGTTTTATATTCAGAAGTCACAAGAA
GAGGAGGACATGAAAGGGCCCCATCTGTGTCCCCTCAAGCGCCATTTTCTTTCGGTAGCCCTACCAGTGAAAACGAATTGGCTCTTGTGGAATATACCCCCAAAACTACG
TCGTTTTCGCCTGGTCCGCCTGCTGAAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTGGTGACTGTGAAATTGGGATCTGAGGTTCTAAGAGGAGTTCT
TTACCATCCAGAGCAGCCACCTCCCTCGGATCTCCGGCCTCAGTCTACCAATGCCATTGTACCGTATACCGGCGGCAGACATCGATATTCTGGTAGGCGGCACCGGAGGA
GCCGGAGAAAGGGAGATCCGAACCACCCAAAACCAAACAGAAGTGGGTATAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAAAGG
GAGTTCACTAAGATGATTGGAGAGTCTTGGAACAATCTTAGCCCTGAAGAAAGGATGGTTTATCAAAACATTGGGTTGAAAGACAAGGAAAGATACAAGCGAGAGTTGAA
AGAGTATAAGGAGAAAATGAGGCAGGCAACCGATGTTGATGGAGCTAACTATTCAAAACATGGGGACTAGCAGAGGAGGAACTAGGAAGAGAATTCAGCAGTTTTTAGGT
TCTTTTTGGGATCTGCTAAAGTTATATGATATATAGATTTTGTATCATATCATATCCTCCTAACTTTACATGGCAAACCATAGGTTCTCATATCCATAGTGCTTGGCCAC
AAGTTTTACAGCCACTTACAAAAGTTCAGTAGTTCATCACTCTTGGAACTGGCATTTTATGGTTGCTTAAACCATTTACATTGACAAATTTCAAGAATGTTGGAACTTTT
TATTTCTTTACATAGACCCCTCAAATCTAGAACACAAGATGTTCAACGAAGAAGACCCTTCCATCCGAGGACGAGGAAGCCAATTAAATTGAGCTTGAGAAGAGAGGCTT
CGACAATACTAATATATGGTTAATTTATTAAAAACAAAAAACATCTTTGGGCACTTTTG
Protein sequenceShow/hide protein sequence
MSPPARTKSWNGGLDKHYPPPLTTHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHERAPSVSPQAPFSFGSPTSENELALVEYTPKTTSF
SPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPPPSDLRPQSTNAIVPYTGGRHRYSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREF
TKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATDVDGANYSKHGD