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Clc05G17440 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G17440
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransmembrane protein
Genome locationClcChr05:26178554..26179180
RNA-Seq ExpressionClc05G17440
SyntenyClc05G17440
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591490.1 hypothetical protein SDJN03_13836, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5189.83Show/hide
Query:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL
        MEVGIGATSRRSRFSSYDR VAVGL +LAVVSPLYIDRRPS +AEEE ESS+ LGFWLPALL+TLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL

Query:  LLLLAFVLKCKASLMFWE
        LLLLAFVLKCKASLM W+
Subjt:  LLLLAFVLKCKASLMFWE
XP_011654202.1 uncharacterized protein LOC105435317 [Cucumis sativus]5.3e-5189.92Show/hide
Query:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL
        MEVG+GA SRRSRFSSYDR +AVGL LLAVVSPLYIDRRPSIE  EE ESSI LGFWLPALLM LIFIIAGVLHLEQRCARFD YWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL

Query:  LLLLAFVLKCKASLMFWES
        LLLLAFVLKCKASLMFWES
Subjt:  LLLLAFVLKCKASLMFWES
XP_022936874.1 uncharacterized protein LOC111443331 [Cucurbita moschata]2.8e-5290.68Show/hide
Query:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL
        MEVGIGATSRRSRFSSYDR VAVGL +LAVVSPLYIDRRPS +AEEE ESS+ LGFWLPALL+TLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL

Query:  LLLLAFVLKCKASLMFWE
        LLLLAFVLKCKASLMFW+
Subjt:  LLLLAFVLKCKASLMFWE
XP_022977145.1 uncharacterized protein LOC111477299 [Cucurbita maxima]9.7e-5391.53Show/hide
Query:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL
        MEVGIGATSRRSRFSSYDR VAVGL +LAVVSPLYIDRRPS +AEEE ESS+ LGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL

Query:  LLLLAFVLKCKASLMFWE
        LLLLAFVLKCKASLMFW+
Subjt:  LLLLAFVLKCKASLMFWE
XP_038899620.1 uncharacterized protein LOC120086878 [Benincasa hispida]1.5e-5394.12Show/hide
Query:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL
        MEVGIGATSRRSRFSSYDR VAVGL LLAVVSPLYIDRRPSIE  EE ESSI LGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL

Query:  LLLLAFVLKCKASLMFWES
        LLLLAFVLKCKASLMFWES
Subjt:  LLLLAFVLKCKASLMFWES
TrEMBL top hitse value%identityAlignment
A0A0A0L2W6 Uncharacterized protein2.6e-5189.92Show/hide
Query:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL
        MEVG+GA SRRSRFSSYDR +AVGL LLAVVSPLYIDRRPSIE  EE ESSI LGFWLPALLM LIFIIAGVLHLEQRCARFD YWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL

Query:  LLLLAFVLKCKASLMFWES
        LLLLAFVLKCKASLMFWES
Subjt:  LLLLAFVLKCKASLMFWES
A0A1S3BUL9 uncharacterized protein LOC1034937027.5e-5189.08Show/hide
Query:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL
        MEVG+GA SRRSRFSSYDR +AVGL LLAVVSPLYIDRRPSIE  EE ESSI LGFWLPALL+ LIFIIAGVLHLEQRCARFD YWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL

Query:  LLLLAFVLKCKASLMFWES
        LLLLAFVLKCKASLMFWES
Subjt:  LLLLAFVLKCKASLMFWES
A0A5D3D907 Uncharacterized protein7.5e-5189.08Show/hide
Query:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL
        MEVG+GA SRRSRFSSYDR +AVGL LLAVVSPLYIDRRPSIE  EE ESSI LGFWLPALL+ LIFIIAGVLHLEQRCARFD YWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL

Query:  LLLLAFVLKCKASLMFWES
        LLLLAFVLKCKASLMFWES
Subjt:  LLLLAFVLKCKASLMFWES
A0A6J1F9J0 uncharacterized protein LOC1114433311.4e-5290.68Show/hide
Query:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL
        MEVGIGATSRRSRFSSYDR VAVGL +LAVVSPLYIDRRPS +AEEE ESS+ LGFWLPALL+TLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL

Query:  LLLLAFVLKCKASLMFWE
        LLLLAFVLKCKASLMFW+
Subjt:  LLLLAFVLKCKASLMFWE
A0A6J1ILG7 uncharacterized protein LOC1114772994.7e-5391.53Show/hide
Query:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL
        MEVGIGATSRRSRFSSYDR VAVGL +LAVVSPLYIDRRPS +AEEE ESS+ LGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL

Query:  LLLLAFVLKCKASLMFWE
        LLLLAFVLKCKASLMFW+
Subjt:  LLLLAFVLKCKASLMFWE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G21910.1 unknown protein4.9e-1846.02Show/hide
Query:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL
        ME G  ++    RF++  +L+A+ LS+LAV+SPLYIDR    + EEE E      F    LL+ LI  IA  L+ +    RFD YWIHR+ GS  G+ ++
Subjt:  MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIL

Query:  LLLLAFVLKCKAS
        L+LL FVL CKAS
Subjt:  LLLLAFVLKCKAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTTGGAATCGGCGCTACGTCGAGAAGGAGCCGGTTTTCTTCCTACGACCGGTTGGTGGCGGTAGGACTCAGCCTTCTTGCGGTGGTTTCACCGCTCTATATCGA
CCGGAGACCAAGCATCGAGGCAGAGGAGGAGTTGGAATCATCCATTAAACTTGGCTTCTGGTTGCCTGCTCTTCTCATGACTTTGATCTTCATTATTGCTGGAGTGCTTC
ACTTGGAACAGAGATGTGCTAGATTTGATGCTTATTGGATTCATAGAGTTGGTGGCTCTTCTTGTGGCATATTCATCCTTCTTCTCCTTCTTGCATTTGTTTTGAAGTGT
AAAGCTTCTTTAATGTTCTGGGAGTCTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAATAGTTTCATTACAACAGCACAAGACTTTGAGAGAACTAGGACTTAGTTTTCCATCTCCATGGAGGTTGGAATCGGCGCTACGTCGAGAAGGAGCCGGTT
TTCTTCCTACGACCGGTTGGTGGCGGTAGGACTCAGCCTTCTTGCGGTGGTTTCACCGCTCTATATCGACCGGAGACCAAGCATCGAGGCAGAGGAGGAGTTGGAATCAT
CCATTAAACTTGGCTTCTGGTTGCCTGCTCTTCTCATGACTTTGATCTTCATTATTGCTGGAGTGCTTCACTTGGAACAGAGATGTGCTAGATTTGATGCTTATTGGATT
CATAGAGTTGGTGGCTCTTCTTGTGGCATATTCATCCTTCTTCTCCTTCTTGCATTTGTTTTGAAGTGTAAAGCTTCTTTAATGTTCTGGGAGTCTTAAGAGCTTGTCCC
AACTTTCAAAGTTCTTTGTGTTTGCTTCCTTGTGTGGTCTTAACTTTCAGAATACTTTTCAGTTTCATCAATGGACACTAAGCTTAGAGTTGAAGAAATTTGTACCTTCT
GCAGTTTTATTTTCGTTACGTATTCGGTTTGAAGATTATACAAATAGTTTTCAATTTCATATCAGTATTTGGGATCA
Protein sequenceShow/hide protein sequence
MEVGIGATSRRSRFSSYDRLVAVGLSLLAVVSPLYIDRRPSIEAEEELESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFILLLLLAFVLKC
KASLMFWES