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Clc05G17830 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G17830
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHeat shock protein DnaJ, cysteine-rich domain containing protein
Genome locationClcChr05:26807785..26810783
RNA-Seq ExpressionClc05G17830
SyntenyClc05G17830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649933.1 hypothetical protein Csa_011967 [Cucumis sativus]1.9e-4256.37Show/hide
Query:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ----VFAIFYTPRGGADEFPMI
        M+SSV CK VIMAKSID +G A TRT+ I S F+ NRV   DSR   SRICGVRASMVDSYGSSDFVKRMEQAWEISQ    +  +         +F + 
Subjt:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ----VFAIFYTPRGGADEFPMI

Query:  LLSCQANNP--RYFDSNQRLFAALLATQKDMLSANGAQELASLFLEIICFVKFHPETLAVSFVLARTKHLESKCFLLVMGSNPSLSRALRVAPTVREQVT
        +   Q ++   ++ + NQ LFAAL ATQ DMLSANG +ELASLFLEIICFVKF PETLAVSFV AR                      L VA TV+ QVT
Subjt:  LLSCQANNP--RYFDSNQRLFAALLATQKDMLSANGAQELASLFLEIICFVKFHPETLAVSFVLARTKHLESKCFLLVMGSNPSLSRALRVAPTVREQVT

Query:  GPSG
        GP+G
Subjt:  GPSG

KAG6591516.1 hypothetical protein SDJN03_13862, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2380.77Show/hide
Query:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M+SSV  + VI+AKSIDGRG +STR ILIGS F+ NRV FTDSR LSSRICG RASMVDSYGSSDFVKRMEQAWEISQ
Subjt:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

KAG7024403.1 hypothetical protein SDJN02_13217 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-2380.77Show/hide
Query:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M+SSV  + VI+AKSIDGRG +STR ILIGS F+ NRV FTDSR LSSRICG RASMVDSYGSSDFVKRMEQAWEISQ
Subjt:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

XP_022935899.1 uncharacterized protein LOC111442664 [Cucurbita moschata]2.0e-2380.77Show/hide
Query:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M+SSV  + VI+AKSIDGRG +STR ILIGS F+ NRV FTDSR LSSRICG RASMVDSYGSSDFVKRMEQAWEISQ
Subjt:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

XP_023522797.1 uncharacterized protein LOC111786806, partial [Cucurbita pepo subsp. pepo]2.0e-2382.05Show/hide
Query:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M SSV    VIMAKSIDGRG +STR ILIGS F+ NRVLFTDSR LSSRICG RASMV+SYGSSDFVKRMEQAWEISQ
Subjt:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

TrEMBL top hitse value%identityAlignment
A0A0A0L478 Uncharacterized protein5.3e-2263.11Show/hide
Query:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQVFAIFYTPRGGADEFPMILLSC
        M+SSV CK VIMAKSID +G A TRT+ I S F+ NRV   DSR   SRICGVRASMVDSYGSSDFVKRMEQAWEISQ       PR      P+   SC
Subjt:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQVFAIFYTPRGGADEFPMILLSC

Query:  QAN
         +N
Subjt:  QAN

A0A1S3BVK1 chaperone protein DnaJ1.2e-2163.11Show/hide
Query:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQVFAIFYTPRGGADEFPMILLSC
        M+SSV CK VIMAKSIDG+G  STRT+ I S F+  RV   DSR   SRICGVRASMVDSYGSSDFVKRMEQAWEISQ       PR      P+   SC
Subjt:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQVFAIFYTPRGGADEFPMILLSC

Query:  QAN
         +N
Subjt:  QAN

A0A6J1CHM4 uncharacterized protein LOC1110117199.4e-1967.95Show/hide
Query:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        MAS V C+ V  AK IDGRG  STR + IG+GF+   + F DS+ LS RICGVRASMVDS+GSSDF KRMEQAWEISQ
Subjt:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

A0A6J1F6R2 uncharacterized protein LOC1114426649.7e-2480.77Show/hide
Query:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M+SSV  + VI+AKSIDGRG +STR ILIGS F+ NRV FTDSR LSSRICG RASMVDSYGSSDFVKRMEQAWEISQ
Subjt:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

A0A6J1IHL0 uncharacterized protein LOC1114772932.2e-2379.49Show/hide
Query:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M SSV  + VI+AKSIDGRG +STR ILIGS F+ NRV FTDSR LSSRICG RAS+VDSYGSSDFVKRMEQAWEISQ
Subjt:  MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGTTCTGTGTCTTGCAAGCGTGTGATTATGGCGAAATCGATTGACGGAAGAGGACTTGCTTCTACGAGAACAATATTAATCGGTTCCGGATTTTCTCCCAATCG
TGTTTTGTTCACCGATTCGAGGCCATTGAGCTCGAGGATTTGTGGCGTGCGAGCTTCCATGGTGGATTCTTATGGAAGCTCCGATTTCGTCAAGAGGATGGAGCAAGCAT
GGGAGATCTCTCAGGTATTCGCGATCTTTTACACTCCTCGCGGAGGAGCCGATGAATTTCCTATGATTCTTCTGTCATGCCAAGCTAACAATCCTAGATATTTTGACAGC
AACCAACGCCTATTTGCTGCTCTTCTTGCAACTCAAAAGGACATGTTGAGTGCAAATGGTGCACAGGAACTGGCTTCTTTATTCTTGGAGATAATATGCTTTGTCAAGTT
CCATCCAGAAACACTAGCTGTGTCATTTGTGCTGGCAAGAACTAAACATTTAGAAAGTAAGTGTTTTCTTTTAGTGATGGGTTCGAATCCTAGTCTGTCAAGGGCTCTAC
GCGTTGCTCCGACTGTAAGGGAACAGGTTACCGGGCCAAGTGGTTGGGAGAACCACCCATCTCTAAATAGTTTGATCCGGTGCTTGCCAGGTCTTAGGTCAAACTATTAT
TTTTCATTATTTTTTCTTAAATCTCATACAGGTCCTAGCACAGTTTTAGTGATGTTATTATTTCACAGTGAAAGTGGAAAAGGATGCTTCCCCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGTTCTGTGTCTTGCAAGCGTGTGATTATGGCGAAATCGATTGACGGAAGAGGACTTGCTTCTACGAGAACAATATTAATCGGTTCCGGATTTTCTCCCAATCG
TGTTTTGTTCACCGATTCGAGGCCATTGAGCTCGAGGATTTGTGGCGTGCGAGCTTCCATGGTGGATTCTTATGGAAGCTCCGATTTCGTCAAGAGGATGGAGCAAGCAT
GGGAGATCTCTCAGGTATTCGCGATCTTTTACACTCCTCGCGGAGGAGCCGATGAATTTCCTATGATTCTTCTGTCATGCCAAGCTAACAATCCTAGATATTTTGACAGC
AACCAACGCCTATTTGCTGCTCTTCTTGCAACTCAAAAGGACATGTTGAGTGCAAATGGTGCACAGGAACTGGCTTCTTTATTCTTGGAGATAATATGCTTTGTCAAGTT
CCATCCAGAAACACTAGCTGTGTCATTTGTGCTGGCAAGAACTAAACATTTAGAAAGTAAGTGTTTTCTTTTAGTGATGGGTTCGAATCCTAGTCTGTCAAGGGCTCTAC
GCGTTGCTCCGACTGTAAGGGAACAGGTTACCGGGCCAAGTGGTTGGGAGAACCACCCATCTCTAAATAGTTTGATCCGGTGCTTGCCAGGTCTTAGGTCAAACTATTAT
TTTTCATTATTTTTTCTTAAATCTCATACAGGTCCTAGCACAGTTTTAGTGATGTTATTATTTCACAGTGAAAGTGGAAAAGGATGCTTCCCCTCATGACTTCTATCGTA
TTTTTGGAGCAGGCTGATTGCTGCTTCTAATGTTTTTTGAAGTAGAGATAAATGTACTATATTTCAGAAATTTAGTAAAATTTGTGCTGTTCCTTCATCAGCTTATATTG
ATTTGGA
Protein sequenceShow/hide protein sequence
MASSVSCKRVIMAKSIDGRGLASTRTILIGSGFSPNRVLFTDSRPLSSRICGVRASMVDSYGSSDFVKRMEQAWEISQVFAIFYTPRGGADEFPMILLSCQANNPRYFDS
NQRLFAALLATQKDMLSANGAQELASLFLEIICFVKFHPETLAVSFVLARTKHLESKCFLLVMGSNPSLSRALRVAPTVREQVTGPSGWENHPSLNSLIRCLPGLRSNYY
FSLFFLKSHTGPSTVLVMLLFHSESGKGCFPS