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Clc05G18480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G18480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSucrose-phosphate synthase
Genome locationClcChr05:27544099..27548763
RNA-Seq ExpressionClc05G18480
SyntenyClc05G18480
Gene Ontology termsGO:0005986 - sucrose biosynthetic process (biological process)
GO:0046524 - sucrose-phosphate synthase activity (molecular function)
InterPro domainsIPR044161 - Sucrose-phosphate synthase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABV32550.1 sucrose phosphate synthase protein 2 [Prunus persica]3.3e-1948.03Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML      NSKDEHG               DKYIPKE ++ ++   +   L+               GQPVW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

BBG95535.1 sucrose phosphate synthase 2F [Prunus dulcis]3.3e-1948.03Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML      NSKDEHG               DKYIPKE ++ ++   +   L+               GQPVW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

XP_020410447.1 probable sucrose-phosphate synthase 1 [Prunus persica]3.3e-1948.03Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML      NSKDEHG               DKYIPKE ++ ++   +   L+               GQPVW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

XP_021822350.1 probable sucrose-phosphate synthase 1 [Prunus avium]3.3e-1948.03Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML      NSKDEHG               DKYIPKE ++ ++   +   L+               GQPVW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

XP_034199459.1 probable sucrose-phosphate synthase 1 [Prunus dulcis]3.3e-1948.03Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML      NSKDEHG               DKYIPKE ++ ++   +   L+               GQPVW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

TrEMBL top hitse value%identityAlignment
A0A251RH16 Sucrose-phosphate synthase1.6e-1948.03Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML      NSKDEHG               DKYIPKE ++ ++   +   L+               GQPVW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

A0A314U5M1 Sucrose-phosphate synthase1.6e-1948.03Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML      NSKDEHG               DKYIPKE ++ ++   +   L+               GQPVW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

A0A4Y1QUJ3 Sucrose-phosphate synthase1.6e-1948.03Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML      NSKDEHG               DKYIPKE ++ ++   +   L+               GQPVW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

A0A5E4F715 Sucrose-phosphate synthase1.6e-1948.03Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML      NSKDEHG               DKYIPKE ++ ++   +   L+               GQPVW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

A0A6P5T5C5 Sucrose-phosphate synthase1.6e-1948.03Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML      NSKDEHG               DKYIPKE ++ ++   +   L+               GQPVW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNLLMVLLAILSR-------------CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

SwissProt top hitse value%identityAlignment
O04932 Probable sucrose-phosphate synthase 18.6e-1842.52Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNL----------LMVLLAILSR---CGQPVWLVTI
        Y +D    QVS P+VDWSYGEPTEML      N  DE G               DKY+ KEL++ ++          ++ +  +L      G P+W   I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML------NSKDEHG---------------DKYIPKELVFQNL----------LMVLLAILSR---CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP+LFTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

O22060 Probable sucrose-phosphate synthase 11.3e-1844.09Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSK------DEHG---------------DKYIPKELVFQNLLMVLLAILSRC-------------GQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML  +      D+ G               DKYI KEL++ ++   +   L+               G+PVW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSK------DEHG---------------DKYIPKELVFQNLLMVLLAILSRC-------------GQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP+LFTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

P49031 Probable sucrose-phosphate synthase6.6e-1842.31Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKDEHG------------------------DKYIPKELVFQ----------NLLMVLLAILSR---CGQPVWL
        Y +D    QVS PDVDWSYGEPTEMLN +D +G                        DKYI KE ++           N ++ +  +L      G+ VW 
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKDEHG------------------------DKYIPKELVFQ----------NLLMVLLAILSR---CGQPVWL

Query:  VTIDGHYADVGDSAALLSRPLNVPLLFTGY
        V I GHYAD GDSAALLS  LNVP+L TG+
Subjt:  VTIDGHYADVGDSAALLSRPLNVPLLFTGY

Q43876 Probable sucrose-phosphate synthase2.5e-1744.88Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEML--NSKDEHGD-------------------KYIPKELV------FQNLLMVLLAILSRC-------GQPVWLVTI
        Y +D    QVS PDVDWSYGEPTEML   + DE GD                   KYIPKE +      F +  M  +  +S+        G  VW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEML--NSKDEHGD-------------------KYIPKELV------FQNLLMVLLAILSRC-------GQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

Q6ZHZ1 Probable sucrose-phosphate synthase 42.3e-1841.73Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKDEHG---------------------DKYIPKELVFQNL----------LMVLLAILSR---CGQPVWLVTI
        Y +D    Q+S PDVDWSYGEPTEML+ ++                        DKYIPKE ++ ++          +M +  +L      GQ VW V I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKDEHG---------------------DKYIPKELVFQNL----------LMVLLAILSR---CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++FTG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

Arabidopsis top hitse value%identityAlignment
AT1G04920.1 sucrose phosphate synthase 3F5.3e-1538.58Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSK-----DEHG---------------DKYIPKELVFQ--------------NLLMVLLAILSRCGQPVWLVTI
        Y +D    Q+   +VDWSY EPTEML +      DE G               DKY+ KE+++               N+  VL   + + G+PVW   I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSK-----DEHG---------------DKYIPKELVFQ--------------NLLMVLLAILSRCGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GDSAALLS  LNVP++ TG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY

AT4G10120.1 Sucrose-phosphate synthase family protein1.3e-1334.71Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKDEHG---------------DKYIPKELVFQNLLMVLLAILSRC-------------GQPVWLVTIDGHYAD
        + +D    Q+S P+VD+SYGEP EML+   E                 DKYIPKE ++ ++   +   L+               G+P+W   I GHYAD
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKDEHG---------------DKYIPKELVFQNLLMVLLAILSRC-------------GQPVWLVTIDGHYAD

Query:  VGDSAALLSRPLNVPLLFTGY
         G+ AA L+  LNVP++ TG+
Subjt:  VGDSAALLSRPLNVPLLFTGY

AT4G10120.2 Sucrose-phosphate synthase family protein1.3e-1334.71Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKDEHG---------------DKYIPKELVFQNLLMVLLAILSRC-------------GQPVWLVTIDGHYAD
        + +D    Q+S P+VD+SYGEP EML+   E                 DKYIPKE ++ ++   +   L+               G+P+W   I GHYAD
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKDEHG---------------DKYIPKELVFQNLLMVLLAILSRC-------------GQPVWLVTIDGHYAD

Query:  VGDSAALLSRPLNVPLLFTGY
         G+ AA L+  LNVP++ TG+
Subjt:  VGDSAALLSRPLNVPLLFTGY

AT5G11110.1 sucrose phosphate synthase 2F1.5e-1742.06Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKD-----EHG---------------DKYIPKELVFQNL----------LMVLLAILSR---CGQPVWLVTID
        Y +D    QV+ PDVD SY EP+EMLN  D     E+G               DKY+PKEL++ ++          +M +  +L      GQ VW V+I 
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKD-----EHG---------------DKYIPKELVFQNL----------LMVLLAILSR---CGQPVWLVTID

Query:  GHYADVGDSAALLSRPLNVPLLFTGY
        GHYAD GDS ALLS  LNVP++FTG+
Subjt:  GHYADVGDSAALLSRPLNVPLLFTGY

AT5G20280.1 sucrose phosphate synthase 1F3.9e-1840.16Show/hide
Query:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKDEHG---------------------DKYIPKELVFQNL----------LMVLLAILSR---CGQPVWLVTI
        Y +D    QVS PDVD+SYGEPTEML  +D                        DKYIPKEL++ ++          +M +  +L      G+P+W   I
Subjt:  YHLDYGRLQVSCPDVDWSYGEPTEMLNSKDEHG---------------------DKYIPKELVFQNL----------LMVLLAILSR---CGQPVWLVTI

Query:  DGHYADVGDSAALLSRPLNVPLLFTGY
         GHYAD GD+ ALLS  LNVP+L TG+
Subjt:  DGHYADVGDSAALLSRPLNVPLLFTGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCTAAAGCTGCAGCGCCTCCTCGTCATCGGCATACTTAGTGGAGACTGCCCGTTTGCGATCCATATGTATCTGGCTTGGACTTTGAAGACTATTGTGAACCGACA
GACCAAACCGATTAAACCAATTTGGCATTATCACCTTGACTATGGAAGATTACAAGTTTCATGTCCTGATGTGGATTGGAGTTATGGTGAGCCGACAGAGATGCTTAACT
CAAAAGATGAACATGGGGACAAGTATATTCCAAAAGAACTTGTATTCCAGAATTTGTTGATGGTGCTGTTAGCCATATTATCCAGATGTGGGCAACCAGTTTGGCTTGTT
ACTATAGATGGACATTATGCAGATGTCGGTGATTCTGCAGCTCTTCTATCTCGACCTTTAAACGTTCCACTGTTATTTACTGGTTACTACCACCACGCAGGAGATGGAAC
AGGAATCAAGAATCGGGATGAAAACGAACCAAAATGGAGCTCCGAAGCATTAACCATGAAGAGAGGGAAACAAATTGACCAAAATGCCCCTGTGGAGCGTCGTTGCCCTG
TGCTCTATGTTGTGCTTTACGCTATCAACCCGAGAGCAAAATTTCGTACAAGGTTGGGACGCTCCGGACATGGACAGAACGGCAAGGCGTGCACATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCTAAAGCTGCAGCGCCTCCTCGTCATCGGCATACTTAGTGGAGACTGCCCGTTTGCGATCCATATGTATCTGGCTTGGACTTTGAAGACTATTGTGAACCGACA
GACCAAACCGATTAAACCAATTTGGCATTATCACCTTGACTATGGAAGATTACAAGTTTCATGTCCTGATGTGGATTGGAGTTATGGTGAGCCGACAGAGATGCTTAACT
CAAAAGATGAACATGGGGACAAGTATATTCCAAAAGAACTTGTATTCCAGAATTTGTTGATGGTGCTGTTAGCCATATTATCCAGATGTGGGCAACCAGTTTGGCTTGTT
ACTATAGATGGACATTATGCAGATGTCGGTGATTCTGCAGCTCTTCTATCTCGACCTTTAAACGTTCCACTGTTATTTACTGGTTACTACCACCACGCAGGAGATGGAAC
AGGAATCAAGAATCGGGATGAAAACGAACCAAAATGGAGCTCCGAAGCATTAACCATGAAGAGAGGGAAACAAATTGACCAAAATGCCCCTGTGGAGCGTCGTTGCCCTG
TGCTCTATGTTGTGCTTTACGCTATCAACCCGAGAGCAAAATTTCGTACAAGGTTGGGACGCTCCGGACATGGACAGAACGGCAAGGCGTGCACATAG
Protein sequenceShow/hide protein sequence
MSLKLQRLLVIGILSGDCPFAIHMYLAWTLKTIVNRQTKPIKPIWHYHLDYGRLQVSCPDVDWSYGEPTEMLNSKDEHGDKYIPKELVFQNLLMVLLAILSRCGQPVWLV
TIDGHYADVGDSAALLSRPLNVPLLFTGYYHHAGDGTGIKNRDENEPKWSSEALTMKRGKQIDQNAPVERRCPVLYVVLYAINPRAKFRTRLGRSGHGQNGKACT