CuGenDBv2

Gene ID	Clc05G19210
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Protein of unknown function (DUF1218)
Genome location	ClcChr05:28164978..28168405
RNA-Seq Expression	Clc05G19210
Synteny	Clc05G19210
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009606 - Modifying wall lignin-1/2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136329.1 uncharacterized protein LOC101222863 [Cucumis sativus]

3.7e-94

96.83

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Query:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVSVK+MSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASS AGYLSLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA
        ALFTTGLAITLLVWPTVTEQLHLTRNVHHN+ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+KG+NSESLKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA

XP_008466341.1 PREDICTED: uncharacterized protein LOC103503778 [Cucumis melo]

4.1e-93

95.77

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Query:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVSVK+MSL VAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASS+AGYLSLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA
        ALFTTGLAITLLVWPTVTEQLHL+RNVHHN ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+KG NSESLKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA

XP_022143268.1 uncharacterized protein LOC111013177 [Momordica charantia]

6.4e-86

87.83

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Query:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVSVK M+LIVA  GV SFIFGV+AENKKPA+GTPIPGKG+VIC+YP DPTV LGYLSV FLLASSIAGY SLFYPYQGKSVPRGAMF+SSSFSVFFNI
Subjt:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA
        A+FTTGLAITLLVWPTVTEQLHLTRNVHHN+ET CPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDYF+EI +KG NSE+LKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA

XP_022937371.1 uncharacterized protein LOC111443679 [Cucurbita moschata]

1.3e-86

88.89

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Query:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVSVK+MSL VA LGV SFIFGV+AENKKPASGTPIPGKGIVICQYP DPTV LGYLSVAFLLASSIAGY SLFYPYQGKSVPRGAMFKSSSFS+FFNI
Subjt:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA
        ALFTTGLAITLLVWPTVTEQ+HLTRNVHHN+E ACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI + G + E+LK++A
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA

XP_038896871.1 uncharacterized protein LOC120085090 [Benincasa hispida]

3.2e-93

95.77

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Query:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MA SVKMMSLIVAALGV SFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGY SLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA
        ALFTTGLAITLL+WPTVTEQLHLTRNVHHN+ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+KG NSESLKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHD9 Uncharacterized protein

1.8e-94

96.83

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Query:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVSVK+MSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASS AGYLSLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA
        ALFTTGLAITLLVWPTVTEQLHLTRNVHHN+ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+KG+NSESLKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA

A0A1S3CR11 uncharacterized protein LOC103503778

2.0e-93

95.77

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Query:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVSVK+MSL VAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASS+AGYLSLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA
        ALFTTGLAITLLVWPTVTEQLHL+RNVHHN ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+KG NSESLKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA

A0A5D3E6F5 Uncharacterized protein

2.0e-93

95.77

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Query:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVSVK+MSL VAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASS+AGYLSLFYPYQGKSVPRGAMFKSSSFS FFNI
Subjt:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA
        ALFTTGLAITLLVWPTVTEQLHL+RNVHHN ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+KG NSESLKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA

A0A6J1CQA7 uncharacterized protein LOC111013177

3.1e-86

87.83

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Query:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVSVK M+LIVA  GV SFIFGV+AENKKPA+GTPIPGKG+VIC+YP DPTV LGYLSV FLLASSIAGY SLFYPYQGKSVPRGAMF+SSSFSVFFNI
Subjt:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA
        A+FTTGLAITLLVWPTVTEQLHLTRNVHHN+ET CPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDYF+EI +KG NSE+LKSSA
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA

A0A6J1FA61 uncharacterized protein LOC111443679

6.2e-87

88.89

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Query:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVSVK+MSL VA LGV SFIFGV+AENKKPASGTPIPGKGIVICQYP DPTV LGYLSVAFLLASSIAGY SLFYPYQGKSVPRGAMFKSSSFS+FFNI
Subjt:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA
        ALFTTGLAITLLVWPTVTEQ+HLTRNVHHN+E ACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI + G + E+LK++A
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSESLKSSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G31130.1 Protein of unknown function (DUF1218)

9.2e-75

74.46

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Query:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI
        MAVS+K MSL+V+ALGV SF+ GVIAENKKPASGTPI GKG+VIC+YP DPTV LGYLS AFLLA ++AGY SLF  Y+GKSVP   +FKS+SFSVFFNI
Subjt:  MAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNI

Query:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSES
        AL T+GLA++LL+WPT+TEQLHLTRNVH N+ET+CPTAKTGLLGGGAF+SLDS LFWLVALMLA NARED+FDE+  +  +  S
Subjt:  ALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKGANSES

Sequences

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CDS sequence

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ATGGATATACATTGGACGATCCGGATCACTATAAATATCGAAACCATTGACCCATCCCTTCAGTCTTCACCTGAAATCCGGAGTGGGAGTGGGAACGGGAGCGAAATCGA
TTTTCATCTCCTTTCGCTCTCCTCTTTCTTCCTTTCTTCCTTTCTTCGATCAATTCTTCAGGTGGTGACATTTATCTGCGGAACAATGGCTGTGTCTGTCAAGATGATGT
CTCTTATTGTCGCAGCTTTAGGTGTGACGTCCTTTATATTTGGAGTCATTGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCATCCCAGGCAAAGGCATTGTTATTTGT
CAGTATCCGGGCGACCCAACTGTGGTCCTGGGATATCTTTCGGTTGCATTTCTTCTTGCTTCTTCAATTGCAGGATACCTCTCTTTGTTCTATCCTTACCAAGGAAAATC
CGTTCCTCGAGGTGCCATGTTTAAGAGCAGCAGTTTCTCTGTTTTCTTCAACATTGCCCTGTTCACAACTGGACTGGCTATAACTTTGCTCGTATGGCCGACAGTCACCG
AGCAACTTCACTTGACGCGCAATGTTCATCACAATGTCGAGACAGCATGCCCAACGGCTAAGACTGGTCTTCTGGGTGGTGGTGCGTTTCTATCCCTTGATTCATCCCTC
TTCTGGTTGGTTGCCCTGATGTTGGCTGGAAATGCTCGTGAGGACTACTTTGATGAAATAGCCGATAAAGGAGCCAATTCTGAATCTCTTAAGAGCAGCGCATGA

mRNA sequence

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Protein sequence

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MDIHWTIRITINIETIDPSLQSSPEIRSGSGNGSEIDFHLLSLSSFFLSSFLRSILQVVTFICGTMAVSVKMMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVIC
QYPGDPTVVLGYLSVAFLLASSIAGYLSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQLHLTRNVHHNVETACPTAKTGLLGGGAFLSLDSSL
FWLVALMLAGNAREDYFDEIADKGANSESLKSSA

Clc05G19210 (gene) of Watermelon (cordophanus) v2 genome