CuGenDBv2

Gene ID	Clc05G19220
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Protein of unknown function (DUF1218)
Genome location	ClcChr05:28174284..28176692
RNA-Seq Expression	Clc05G19220
Synteny	Clc05G19220
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009606 - Modifying wall lignin-1/2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136327.1 uncharacterized protein LOC101222453 [Cucumis sativus]

2.7e-81

84.21

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Query:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI
        M VSVKLM+++VGTLGVISF+FGV+AENKKPASGTPI GKG VVCKY  DPTVALGFLSF+FLLASS AGYLS+FYPY+GKS+PRGAFFK++TF AFFNI
Subjt:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI

Query:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKG-TSAGGLKSSA
        ALFTTGLAIT LVWPTVTEQ HLTRNVH NL+TACPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDYFDEI EKG T+   +KSSA
Subjt:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKG-TSAGGLKSSA

XP_004136329.1 uncharacterized protein LOC101222863 [Cucumis sativus]

2.3e-80

83.07

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Query:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI
        M VSVKLM++IV  LGV SFIFGVIAENKKPASGTPI GKGIV+C+YPGDPTV LG+LS  FLLASS AGYLS+FYPYQGKS+PRGA FK+++FS FFNI
Subjt:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI

Query:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA
        ALFTTGLAIT LVWPTVTEQ HLTRNVH N+ETACPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDYFDEI EKG+++  LKSSA
Subjt:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA

XP_008466340.1 PREDICTED: uncharacterized protein LOC103503777 [Cucumis melo]

4.5e-84

85.71

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Query:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI
        M VSVKLM+++VGTLGVISF+FGV+AENKKPASGTPI GKG+VVCKY  DPTVALGFLSFLFLLASS AGYLS+FYPY+GKS+PRGAFFK+++FSAFFNI
Subjt:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI

Query:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA
        ALFTTGLAIT LVWPTVTEQ HLTRNVH NL TACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEI EKGT+   +KSSA
Subjt:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA

XP_022143257.1 uncharacterized protein LOC111013166 [Momordica charantia]

1.3e-80

82.01

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Query:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI
        M VSVK MA+IV T GVISFIFGV+AENKKPA+GTPIQGKG+V+CKYPGDPTVALG+LS LFLLASS+AGY S+FYPYQGKS+PRGA F++++FS FFNI
Subjt:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI

Query:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA
        A+FTTGLAIT LVWPTVTEQ HL RNVH NLET CPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYF+EI+E GT++  LKSSA
Subjt:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA

XP_038897126.1 uncharacterized protein LOC120085287 [Benincasa hispida]

9.6e-87

89.95

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Query:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI
        M VSVKLM++IVGTLG ISFIFGV+AENKKPASGTPI GKGIVVCKYP DPTVALGFLSFLFLLASS AGYLS+FYPY+GKSIPRGAFFK+ +FSAFFNI
Subjt:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI

Query:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA
        ALFTTGLAITFLVWPTVTEQ HLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEI EKGT    LKSSA
Subjt:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LEF8 Uncharacterized protein

1.3e-81

84.21

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Query:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI
        M VSVKLM+++VGTLGVISF+FGV+AENKKPASGTPI GKG VVCKY  DPTVALGFLSF+FLLASS AGYLS+FYPY+GKS+PRGAFFK++TF AFFNI
Subjt:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI

Query:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKG-TSAGGLKSSA
        ALFTTGLAIT LVWPTVTEQ HLTRNVH NL+TACPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDYFDEI EKG T+   +KSSA
Subjt:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKG-TSAGGLKSSA

A0A0A0LHD9 Uncharacterized protein

1.1e-80

83.07

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Query:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI
        M VSVKLM++IV  LGV SFIFGVIAENKKPASGTPI GKGIV+C+YPGDPTV LG+LS  FLLASS AGYLS+FYPYQGKS+PRGA FK+++FS FFNI
Subjt:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI

Query:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA
        ALFTTGLAIT LVWPTVTEQ HLTRNVH N+ETACPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDYFDEI EKG+++  LKSSA
Subjt:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA

A0A1S3CR04 uncharacterized protein LOC103503777

2.2e-84

85.71

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Query:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI
        M VSVKLM+++VGTLGVISF+FGV+AENKKPASGTPI GKG+VVCKY  DPTVALGFLSFLFLLASS AGYLS+FYPY+GKS+PRGAFFK+++FSAFFNI
Subjt:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI

Query:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA
        ALFTTGLAIT LVWPTVTEQ HLTRNVH NL TACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEI EKGT+   +KSSA
Subjt:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA

A0A5D3E5J0 Uncharacterized protein

2.2e-84

85.71

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Query:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI
        M VSVKLM+++VGTLGVISF+FGV+AENKKPASGTPI GKG+VVCKY  DPTVALGFLSFLFLLASS AGYLS+FYPY+GKS+PRGAFFK+++FSAFFNI
Subjt:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI

Query:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA
        ALFTTGLAIT LVWPTVTEQ HLTRNVH NL TACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEI EKGT+   +KSSA
Subjt:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA

A0A6J1CQA0 uncharacterized protein LOC111013166

6.5e-81

82.01

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Query:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI
        M VSVK MA+IV T GVISFIFGV+AENKKPA+GTPIQGKG+V+CKYPGDPTVALG+LS LFLLASS+AGY S+FYPYQGKS+PRGA F++++FS FFNI
Subjt:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI

Query:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA
        A+FTTGLAIT LVWPTVTEQ HL RNVH NLET CPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYF+EI+E GT++  LKSSA
Subjt:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G31130.1 Protein of unknown function (DUF1218)

1.1e-69

70.22

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Query:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI
        M VS+K M+++V  LGV+SF+ GVIAENKKPASGTPI GKG+V+CKYP DPTVALG+LS  FLLA ++AGY S+F  Y+GKS+P    FK+T+FS FFNI
Subjt:  MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNI

Query:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEK
        AL T+GLA++ L+WPT+TEQ HLTRNVH NLET+CPTAKTGLLGGGAF+SLDS L WLVALMLA NARED+FDE++ +
Subjt:  ALFTTGLAITFLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEK

Sequences

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CDS sequence

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ATGGTTGTTTCTGTTAAGTTGATGGCTATTATTGTTGGAACTCTCGGTGTCATTTCCTTTATATTTGGAGTCATAGCTGAAAACAAGAAGCCTGCTTCTGGAACTCCCAT
CCAAGGGAAAGGTATTGTTGTTTGCAAATATCCGGGGGACCCGACGGTGGCCCTGGGATTTCTTTCCTTTCTGTTTCTTCTTGCTTCTTCACTTGCTGGTTACCTCTCTG
TGTTCTATCCTTACCAAGGAAAATCCATTCCTCGAGGTGCCTTCTTTAAGACCACTACTTTCTCTGCATTCTTCAACATTGCTCTGTTCACGACTGGATTAGCTATAACT
TTTCTGGTATGGCCTACGGTGACGGAGCAATTTCACTTGACTCGCAACGTTCATCTAAATCTCGAGACAGCGTGCCCGACGGCTAAGACCGGTCTTCTGGGTGGCGGTGC
ATTTCTATCCCTTGATTCGTCCCTCCTCTGGTTGGTTGCTCTGATGCTCGCTGGTAACGCTCGAGAGGACTATTTCGATGAAATAGATGAAAAAGGAACCAGTGCTGGAG
GTCTTAAGAGCAGTGCATAA

mRNA sequence

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CACAAATTGACTCCCACTCTTCAGTTTCGCCTTAATTCCAGAAACAAGTGTGTTCTTCATAATTTCTCTCCATTTTTAACCCATTCTTCTTTTCCCTACACAAATCCAAG
ATCACTAGTAACACTTATCTAGAAAACAATGGTTGTTTCTGTTAAGTTGATGGCTATTATTGTTGGAACTCTCGGTGTCATTTCCTTTATATTTGGAGTCATAGCTGAAA
ACAAGAAGCCTGCTTCTGGAACTCCCATCCAAGGGAAAGGTATTGTTGTTTGCAAATATCCGGGGGACCCGACGGTGGCCCTGGGATTTCTTTCCTTTCTGTTTCTTCTT
GCTTCTTCACTTGCTGGTTACCTCTCTGTGTTCTATCCTTACCAAGGAAAATCCATTCCTCGAGGTGCCTTCTTTAAGACCACTACTTTCTCTGCATTCTTCAACATTGC
TCTGTTCACGACTGGATTAGCTATAACTTTTCTGGTATGGCCTACGGTGACGGAGCAATTTCACTTGACTCGCAACGTTCATCTAAATCTCGAGACAGCGTGCCCGACGG
CTAAGACCGGTCTTCTGGGTGGCGGTGCATTTCTATCCCTTGATTCGTCCCTCCTCTGGTTGGTTGCTCTGATGCTCGCTGGTAACGCTCGAGAGGACTATTTCGATGAA
ATAGATGAAAAAGGAACCAGTGCTGGAGGTCTTAAGAGCAGTGCATAAAAAGCTTCTTTGTTTGTTTAGTGAGAATAATAATTCAGTTTCACATTACTCTCCATTTACTC
CTTATTTAGTAATTAAGGATTTCTTGCCTTTAGGGAG

Protein sequence

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MVVSVKLMAIIVGTLGVISFIFGVIAENKKPASGTPIQGKGIVVCKYPGDPTVALGFLSFLFLLASSLAGYLSVFYPYQGKSIPRGAFFKTTTFSAFFNIALFTTGLAIT
FLVWPTVTEQFHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIDEKGTSAGGLKSSA

Clc05G19220 (gene) of Watermelon (cordophanus) v2 genome