CuGenDBv2

Gene ID	Clc05G19240
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	ribosomal RNA small subunit methyltransferase H
Genome location	ClcChr05:28188111..28194202
RNA-Seq Expression	Clc05G19240
Synteny	Clc05G19240
Gene Ontology terms	GO:0032259 - methylation (biological process) GO:0009507 - chloroplast (cellular component) GO:0008168 - methyltransferase activity (molecular function)
InterPro domains	IPR002903 - Ribosomal RNA small subunit methyltransferase H IPR023397 - S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7037555.1 rsmH, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.8e-197

82.78

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Query:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSVS----------KLALVKEKRRTRSTKEFDE
        MAFRSSM K SLFSS  SQS R +++  TC TP P IFR CS STA D  NK KK K KK+KN+KAST+V           KLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSVS----------KLALVKEKRRTRSTKEFDE

Query:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL
         A+Q GDT AHIPVMLAEVLDVFS SSGRPL SFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRIS LFCEDSDLKAY VLKNFKY+KSL
Subjt:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL

Query:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE
        LADSDEKPLDPGV GILMDLGMSSMQVDDPERGF VL DGPLDMRMDPQASLKAEDILNSWPEIEVGR+LRVYGEESNWYSLQNKIVKARSQGGLH+T+E
Subjt:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE

Query:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTEG-DEDGGEVTRIIEE
        LVDLIRKST GFKGGRQGWIKTATRVFQALRIAVNDELKVLED+LY+ F+CLAPGGRLAVISFHSLEDRVVKQTFL+II NPKTEG DE+  EV R+ E+
Subjt:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTEG-DEDGGEVTRIIEE

Query:  N------EEWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKND
        N      EEWIKQ VKGS+G +LTKRPITPSEEEERLNRR RSAKLRVIQKN+
Subjt:  N------EEWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKND

XP_008466336.1 PREDICTED: ribosomal RNA small subunit methyltransferase H [Cucumis melo]

3.6e-214

88.79

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Query:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE
        MAFRSS+AKFSLFSS SSQSL F H+FFTCTTPPPRIFRFCS STA+ VKNK KKEKHKKSKNLKAST V          SKLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE

Query:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL
        NAI IGDT AHIPVMLAEVLDVFS SSGRPL SFVDCTVGAGGHSSAIIQAHPEL FYMGMDVDPIALDKAQDRIS  F EDSDLKAY+VLKNFKY+KSL
Subjt:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL

Query:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE
        LADSDEKPLDPGV GILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILN+WPEIEVGRILR YGEESNWYSLQNKIVKARSQGGLHSTT+
Subjt:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE

Query:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE
        L+DLIRKST GFKGGRQGWIKTATRVFQALRIAVNDEL VL++SLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFL+IINPKTEGD    EV +II+E E
Subjt:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE

Query:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV
        EWIKQTVKGSKG VLTKRPITPSEEEERLNRRSRSAKLRVIQKN V
Subjt:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV

XP_022940206.1 uncharacterized protein LOC111445901 [Cucurbita moschata]

8.2e-198

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Query:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSVS----------KLALVKEKRRTRSTKEFDE
        MAFRSSM K SLFSS  SQS R +++  TC TP P IFR CS STA D  NK KK K KK+KN+KAST+V           KLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSVS----------KLALVKEKRRTRSTKEFDE

Query:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL
         A+Q GDT AHIPVMLAEVLDVFS SSGRPL SFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRIS LFCEDSDLKAY VLKNFKY+KSL
Subjt:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL

Query:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE
        LADSDEKPLDPGV GILMDLGMSSMQVDDPERGF VL DGPLDMRMDPQASLKAEDILNSWPEIEVGR+LRVYGEESNWYSLQNKIVKARSQGGLH+T+E
Subjt:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE

Query:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTEG-DEDGGEVTRIIEE
        LVDLIRKST GFKGGRQGWIKTATRVFQALRIAVNDELKVLED+LY+ F+CLAPGGRLAVISFHSLEDRVVKQTFL+II NPKTEG DE+  EV R+ E+
Subjt:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTEG-DEDGGEVTRIIEE

Query:  N------EEWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKND
        N      EEWIKQ VKGSKG +LTKRPITPSEEEERLNRR RSAKLRVIQKN+
Subjt:  N------EEWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKND

XP_031739414.1 uncharacterized protein LOC101221749 [Cucumis sativus]

8.1e-222

90.36

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Query:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE
        MAFRSS+AKFSLFSS SSQSL FQH FFTCTTPPPRIFRFCS STA+ VKNKAKKEK KKSKNLKASTSV          SKLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE

Query:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL
        NAI IGDT AHIPVMLAEVLDVF+ SSGRPL SFVDCTVGAGGHSSAIIQAHPEL FYMGMDVDPIALDKAQDRIS  F EDSDLKAY+VLKNFKYVKSL
Subjt:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL

Query:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE
        LADSDEKPLDPGV G++MDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILN+WPE EVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTT+
Subjt:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE

Query:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE
        L+DLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDEL VL++SLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFL+IINPKTEGDEDGGEVT+I+EENE
Subjt:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE

Query:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV
        EWIKQTVKG KGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKN V
Subjt:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV

XP_038896155.1 ribosomal RNA small subunit methyltransferase H [Benincasa hispida]

4.6e-217

89.46

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Query:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE
        MAFRSSMAKFSLFS   SQSLRFQH  FTCTTPP RIFR CS +TAADVKNKAKKEK K SKNLKASTSV          SKLALVKEKRRTRSTK+FDE
Subjt:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE

Query:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL
        NAIQ+GDT AHIPVMLAEVLDVFSGSSGRPL SFVDCTVGAGGHSSAIIQAH ELKFYMGMDVDPIALDKAQDRISALF EDSDLKAY+VLKNFKYVKSL
Subjt:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL

Query:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE
        LADSDEKPLDPGV GILMDLGMSSMQVDDPERGF VLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHST E
Subjt:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE

Query:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE
        LVDLIRKSTLG KGGRQGWIKTATRVFQALRIAVNDEL VLED+LYTCFDCLAPGGRLAVISFHSLEDRVVKQTFL+IINPKT+GDE   ++T+I+EENE
Subjt:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE

Query:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV
         WIKQTV GSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQK +V
Subjt:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDT0 Uncharacterized protein

3.9e-222

90.36

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Query:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE
        MAFRSS+AKFSLFSS SSQSL FQH FFTCTTPPPRIFRFCS STA+ VKNKAKKEK KKSKNLKASTSV          SKLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE

Query:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL
        NAI IGDT AHIPVMLAEVLDVF+ SSGRPL SFVDCTVGAGGHSSAIIQAHPEL FYMGMDVDPIALDKAQDRIS  F EDSDLKAY+VLKNFKYVKSL
Subjt:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL

Query:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE
        LADSDEKPLDPGV G++MDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILN+WPE EVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTT+
Subjt:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE

Query:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE
        L+DLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDEL VL++SLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFL+IINPKTEGDEDGGEVT+I+EENE
Subjt:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE

Query:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV
        EWIKQTVKG KGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKN V
Subjt:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV

A0A1S3CR02 ribosomal RNA small subunit methyltransferase H

1.8e-214

88.79

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Query:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE
        MAFRSS+AKFSLFSS SSQSL F H+FFTCTTPPPRIFRFCS STA+ VKNK KKEKHKKSKNLKAST V          SKLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE

Query:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL
        NAI IGDT AHIPVMLAEVLDVFS SSGRPL SFVDCTVGAGGHSSAIIQAHPEL FYMGMDVDPIALDKAQDRIS  F EDSDLKAY+VLKNFKY+KSL
Subjt:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL

Query:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE
        LADSDEKPLDPGV GILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILN+WPEIEVGRILR YGEESNWYSLQNKIVKARSQGGLHSTT+
Subjt:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE

Query:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE
        L+DLIRKST GFKGGRQGWIKTATRVFQALRIAVNDEL VL++SLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFL+IINPKTEGD    EV +II+E E
Subjt:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE

Query:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV
        EWIKQTVKGSKG VLTKRPITPSEEEERLNRRSRSAKLRVIQKN V
Subjt:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV

A0A5A7T697 Ribosomal RNA small subunit methyltransferase H

1.8e-214

88.79

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Query:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE
        MAFRSS+AKFSLFSS SSQSL F H+FFTCTTPPPRIFRFCS STA+ VKNK KKEKHKKSKNLKAST V          SKLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSV----------SKLALVKEKRRTRSTKEFDE

Query:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL
        NAI IGDT AHIPVMLAEVLDVFS SSGRPL SFVDCTVGAGGHSSAIIQAHPEL FYMGMDVDPIALDKAQDRIS  F EDSDLKAY+VLKNFKY+KSL
Subjt:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL

Query:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE
        LADSDEKPLDPGV GILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILN+WPEIEVGRILR YGEESNWYSLQNKIVKARSQGGLHSTT+
Subjt:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE

Query:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE
        L+DLIRKST GFKGGRQGWIKTATRVFQALRIAVNDEL VL++SLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFL+IINPKTEGD    EV +II+E E
Subjt:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENE

Query:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV
        EWIKQTVKGSKG VLTKRPITPSEEEERLNRRSRSAKLRVIQKN V
Subjt:  EWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDV

A0A6J1FNN0 uncharacterized protein LOC111445901

3.9e-198

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Query:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSVS----------KLALVKEKRRTRSTKEFDE
        MAFRSSM K SLFSS  SQS R +++  TC TP P IFR CS STA D  NK KK K KK+KN+KAST+V           KLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSVS----------KLALVKEKRRTRSTKEFDE

Query:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL
         A+Q GDT AHIPVMLAEVLDVFS SSGRPL SFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRIS LFCEDSDLKAY VLKNFKY+KSL
Subjt:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL

Query:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE
        LADSDEKPLDPGV GILMDLGMSSMQVDDPERGF VL DGPLDMRMDPQASLKAEDILNSWPEIEVGR+LRVYGEESNWYSLQNKIVKARSQGGLH+T+E
Subjt:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE

Query:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTEG-DEDGGEVTRIIEE
        LVDLIRKST GFKGGRQGWIKTATRVFQALRIAVNDELKVLED+LY+ F+CLAPGGRLAVISFHSLEDRVVKQTFL+II NPKTEG DE+  EV R+ E+
Subjt:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTEG-DEDGGEVTRIIEE

Query:  N------EEWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKND
        N      EEWIKQ VKGSKG +LTKRPITPSEEEERLNRR RSAKLRVIQKN+
Subjt:  N------EEWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKND

A0A6J1IWR1 uncharacterized protein LOC111481293

1.6e-194

81.68

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Query:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSVS----------KLALVKEKRRTRSTKEFDE
        MAFRSSM K SLFSS  SQS R +++  TC TP P IFR CS STA D K K KK K KK+KN+KAST+V           KLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSVS----------KLALVKEKRRTRSTKEFDE

Query:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL
         A+Q GDT AHIPVMLAEVLDVFS SSGR L SFVDCTVGAGGHSSAIIQAH ELKFYMGMDVDPIALDKAQDRIS LFCEDSDLK Y VLKNFKY+K L
Subjt:  NAIQIGDTTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSL

Query:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE
        LADSDEKPL+PGV GILMDLGMSSMQVDDPERGF VL DGPLDMRMDPQASLKAEDILNSWPE+EVGR+LRVYGEESNWYSLQNKIVKARSQGGLH+T+E
Subjt:  LADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTE

Query:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIIN-PKTEG-DEDGGEVTRIIEE
        LVDLIRKST G KGGRQGWIKTATRVFQALRIAVNDELKVLEDSLY+ F+CLAPGGRLAVISFHSLEDRVVKQTFL+IIN PKTEG DE+  EV R+ ++
Subjt:  LVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIIN-PKTEG-DEDGGEVTRIIEE

Query:  N------EEWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKND
        N      EEWIKQTVKGSKG +LTKRPITPSEEEERLNRR RSAKLRVIQKN+
Subjt:  N------EEWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKND

SwissProt top hits

e value

%identity

Alignment

B0TGB2 Ribosomal RNA small subunit methyltransferase H

6.8e-54

42.04

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Query:  HIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSLLADSDEKPLD
        HIPV+L +VL+V      RP   ++D TVG GGHS+AI+Q        +G+D DP AL  A  ++++        +  +V  NF+++ +++A   E  L 
Subjt:  HIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSLLADSDEKPLD

Query:  PGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKSTL
          + GIL+D+G+SS Q+D+ ERGF    D PLDMRM+P+++L A  +LN  PE E+ RILR YGEE     +   IVK R+   L  T ELVD+IR +  
Subjt:  PGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKSTL

Query:  GFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENEEWIKQTVKGS
             RQ     A R FQALRIAVNDEL  LE++L    + LAPGGRLAVISFHSLEDR+VK  F      +  G     +       N   +K      
Subjt:  GFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENEEWIKQTVKGS

Query:  KGTVLTKRPITPSEEEERLNRRSRSAKLRVIQK
           ++TK+P+  S+EE R N R++SAKLR  +K
Subjt:  KGTVLTKRPITPSEEEERLNRRSRSAKLRVIQK

C6D563 Ribosomal RNA small subunit methyltransferase H

9.4e-56

41.25

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Query:  HIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSLLADSDEKPLD
        HI V+L E +D   G + +P   +VDCT+G  GHS  I+         +  D D  ALD A+ R++         +  +V  NF+Y++ +L   D   +D
Subjt:  HIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSLLADSDEKPLD

Query:  --PGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKS
          P V GIL DLG+SS Q+D+ ERGF    D PLDMRMD   +L A DI+NSW E E+ RIL VYGEE    S+  KIV+AR    + +T EL +L+ K+
Subjt:  --PGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKS

Query:  TLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENEEWIKQTVK
         +     R G    A R FQALRIAVNDEL   ED+L     C+ PGGR++VI+FHSLEDR+ KQ F + +   T   +                 + V 
Subjt:  TLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENEEWIKQTVK

Query:  GSKG--TVLTKRPITPSEEEERLNRRSRSAKLRVIQK
        G  G   ++ ++PI P+E+E  +N RSRSAKLRV +K
Subjt:  GSKG--TVLTKRPITPSEEEERLNRRSRSAKLRVIQK

Q07876 Ribosomal RNA small subunit methyltransferase H

1.3e-52

40.6

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Query:  HIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVL--KNFKYVKSLLADSDEKP
        H  V+L E +D   G + +P  ++VDCT+G  GHS+ ++Q   E    +  D D  AL  A++ +       SD K  ++L   NF+Y+K  L +     
Subjt:  HIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVL--KNFKYVKSLLADSDEKP

Query:  LDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKS
        +D    GIL DLG+SS Q+D PERGF    D PLDMRMD  A+L A++++N W   ++ RI   YGEE     +  KI +AR +  + +T +LVDLI K 
Subjt:  LDPGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKS

Query:  TLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENEEWIKQTVK
         +     R G    A RVFQA+RIAVNDEL+V E++L    + L PGGR++VI+FHSLEDR+ K TF      K+   E    +  I EE E  +K    
Subjt:  TLGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENEEWIKQTVK

Query:  GSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQK
             ++T++PIT S+EE   N R+RSAKLR+ +K
Subjt:  GSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQK

Q6MEG4 Ribosomal RNA small subunit methyltransferase H

1.7e-57

41.14

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Query:  HIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSLLADSDEKPLD
        H  V+L EV++ F       L  F+D T+GAGGH+ AI++ HPE++ Y+G+D DP AL+ A  R+     E    K  +   NF      L +     +D
Subjt:  HIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSLLADSDEKPLD

Query:  PGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKSTL
            G+L+DLG+SSMQ+D PERGF    DGPLDMRM+P+  L A DI+N+W E ++G+I R YGEE  W      IV+AR    + +TT+L +L++ +  
Subjt:  PGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKSTL

Query:  GFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENEEWIKQTVKGS
         F    +  I   T +FQALRI VN EL VLE  +   FD L PGGR+AVISFHSLEDR+VK       + K E    G  + R             K  
Subjt:  GFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENEEWIKQTVKGS

Query:  KGTVLTKRPITPSEEEERLNRRSRSAKLRVIQK
           ++ ++PI P E+E + N RSRSAK R+ +K
Subjt:  KGTVLTKRPITPSEEEERLNRRSRSAKLRVIQK

Q8GE08 Ribosomal RNA small subunit methyltransferase H (Fragment)

1.2e-53

41.74

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Query:  HIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSLLADSDEKPLD
        HIPV+L EVL+       RP   ++D TVG GGHS+AI++        +G+D DP AL  A+ ++     E    +  +V  NF+ + S++ +  +K   
Subjt:  HIPVMLAEVLDVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSLLADSDEKPLD

Query:  PGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKSTL
          + GIL+D+G+SS Q+D+ ERGF    + PLDMRM+P  ++ A  ILN +PE E+ RIL  YGEE     +   IV  R++  L STT+LVD+IR +  
Subjt:  PGVHGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKSTL

Query:  GFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENEEWIKQTVKGS
             RQ     A R FQALRIAVNDEL  L+++L    D LAP GRLAVISFHSLEDR+VK    N    + +G     ++          +    K +
Subjt:  GFKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENEEWIKQTVKGS

Query:  KGTVLTKRPITPSEEEERLNRRSRSAKLRVIQK
        +  ++T++PIT SEEE ++N RS+SAKLRV QK
Subjt:  KGTVLTKRPITPSEEEERLNRRSRSAKLRVIQK

Arabidopsis top hits

e value

%identity

Alignment

AT5G10910.1 mraW methylase family protein

1.7e-129

60.77

Show/hide

Query:  PPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSVSKLALVKEKRRTRSTKEFDENAIQIGD--TTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGA
        P R     + +  +    K +KEK K+ K ++   + ++  + KEKRRTRS++ ++   +  GD   ++H+PVML EVLD+FS      L SFVDCT+GA
Subjt:  PPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSVSKLALVKEKRRTRSTKEFDENAIQIGD--TTAHIPVMLAEVLDVFSGSSGRPLHSFVDCTVGA

Query:  GGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSLLADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGP
         GHSS+IIQ+H ELK ++GMDVDP+A       I +L      LKA +VLKNFKY+KS++AD+  + LD GV GILMDLGMSSMQV++PERGF VL +GP
Subjt:  GGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSLLADSDEKPLDPGVHGILMDLGMSSMQVDDPERGFRVLGDGP

Query:  LDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVL
        LDMRMDPQA+L AEDI+NSWPE E+GR+LR YGEESNWY LQN+IVKAR  GGLHST ELVDLIR ++   +GGRQGWIKTATRVFQ LRIAVNDELK L
Subjt:  LDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKVL

Query:  EDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGG-----------EVTRIIEENEEWIKQTVKGSKGTVLTKRPITPSEEEERLN
        ++SLY+ FD LAPGGRLAVISFHSLEDRVVKQTFL+I+  + E     G            V + ++E EEWIKQTV  SKG +LTKRPITPSEEEERLN
Subjt:  EDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGG-----------EVTRIIEENEEWIKQTVKGSKGTVLTKRPITPSEEEERLN

Query:  RRSRSAKLRVIQK
        RR+RSAKLRVIQK
Subjt:  RRSRSAKLRVIQK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCATTTAGATCATCAATGGCGAAATTCTCGTTGTTTTCTTCTTTTTCGTCACAATCTCTTCGTTTTCAGCATGTGTTTTTCACCTGTACTACTCCGCCGCCGAGAAT
TTTCCGGTTCTGTTCGAATTCTACTGCTGCTGATGTTAAGAACAAGGCAAAGAAAGAGAAACATAAAAAATCGAAGAATCTGAAGGCGAGTACTTCTGTTTCGAAATTAG
CTTTGGTGAAGGAGAAAAGGAGGACTCGGTCCACTAAGGAGTTTGATGAGAACGCTATCCAGATCGGCGACACCACTGCTCACATCCCGGTGATGCTTGCGGAAGTATTG
GACGTATTCTCTGGTTCATCTGGAAGGCCGCTACACTCATTTGTAGATTGCACTGTCGGTGCCGGTGGACATTCCTCAGCGATAATTCAAGCCCATCCAGAGTTAAAGTT
TTACATGGGAATGGATGTCGATCCAATTGCACTTGATAAGGCTCAAGATCGGATTAGTGCTCTCTTCTGTGAGGATTCTGATTTGAAAGCATATATGGTTCTGAAGAACT
TCAAATATGTGAAATCACTACTGGCTGATTCAGATGAGAAACCTTTAGATCCTGGAGTTCATGGAATTTTGATGGATTTGGGAATGTCATCCATGCAGGTGGACGATCCT
GAAAGAGGATTTAGAGTCCTTGGTGATGGACCTCTTGATATGCGAATGGATCCTCAGGCAAGTCTAAAAGCAGAGGACATTTTGAACAGTTGGCCGGAAATAGAAGTGGG
GCGTATCTTGCGGGTTTATGGAGAAGAAAGCAATTGGTATTCACTCCAGAATAAAATCGTAAAAGCTCGATCACAGGGTGGATTGCATTCCACCACTGAATTAGTTGATC
TTATCCGGAAATCCACTCTAGGATTTAAAGGAGGAAGACAAGGTTGGATAAAGACGGCAACCAGGGTATTCCAAGCTCTGAGGATCGCTGTTAATGATGAACTCAAGGTA
TTAGAAGACTCCCTGTATACATGTTTCGATTGCCTTGCTCCCGGCGGTCGCCTTGCAGTCATCTCCTTCCACAGTTTGGAGGATAGGGTTGTGAAGCAAACATTCCTTAA
CATCATTAACCCCAAAACAGAAGGAGATGAAGATGGAGGAGAGGTCACAAGGATTATTGAAGAAAATGAAGAATGGATTAAACAAACTGTTAAGGGTTCGAAAGGTACAG
TCCTCACAAAAAGACCGATAACTCCATCGGAAGAGGAAGAGCGGTTGAATCGGCGGTCTAGGAGTGCTAAGCTGAGAGTAATTCAGAAGAATGATGTTTGCTGA

mRNA sequence

Show/hide mRNA sequence

GGATAAAATGAGAATAAATCTGTCCAATCTGGAAATTAGGGCTCGGAAATGTAAATTTCCCCATTTCCCTCCATTTTCAGACTATGCAGAAGAATTTTCCCTTTGAACTT
CAAGATATCACCACTTTACAGCTTCAACAATCTCAATCTGTGTTCTACTGATGCAATCAGAGCTCTAGGAAATGGCATTTAGATCATCAATGGCGAAATTCTCGTTGTTT
TCTTCTTTTTCGTCACAATCTCTTCGTTTTCAGCATGTGTTTTTCACCTGTACTACTCCGCCGCCGAGAATTTTCCGGTTCTGTTCGAATTCTACTGCTGCTGATGTTAA
GAACAAGGCAAAGAAAGAGAAACATAAAAAATCGAAGAATCTGAAGGCGAGTACTTCTGTTTCGAAATTAGCTTTGGTGAAGGAGAAAAGGAGGACTCGGTCCACTAAGG
AGTTTGATGAGAACGCTATCCAGATCGGCGACACCACTGCTCACATCCCGGTGATGCTTGCGGAAGTATTGGACGTATTCTCTGGTTCATCTGGAAGGCCGCTACACTCA
TTTGTAGATTGCACTGTCGGTGCCGGTGGACATTCCTCAGCGATAATTCAAGCCCATCCAGAGTTAAAGTTTTACATGGGAATGGATGTCGATCCAATTGCACTTGATAA
GGCTCAAGATCGGATTAGTGCTCTCTTCTGTGAGGATTCTGATTTGAAAGCATATATGGTTCTGAAGAACTTCAAATATGTGAAATCACTACTGGCTGATTCAGATGAGA
AACCTTTAGATCCTGGAGTTCATGGAATTTTGATGGATTTGGGAATGTCATCCATGCAGGTGGACGATCCTGAAAGAGGATTTAGAGTCCTTGGTGATGGACCTCTTGAT
ATGCGAATGGATCCTCAGGCAAGTCTAAAAGCAGAGGACATTTTGAACAGTTGGCCGGAAATAGAAGTGGGGCGTATCTTGCGGGTTTATGGAGAAGAAAGCAATTGGTA
TTCACTCCAGAATAAAATCGTAAAAGCTCGATCACAGGGTGGATTGCATTCCACCACTGAATTAGTTGATCTTATCCGGAAATCCACTCTAGGATTTAAAGGAGGAAGAC
AAGGTTGGATAAAGACGGCAACCAGGGTATTCCAAGCTCTGAGGATCGCTGTTAATGATGAACTCAAGGTATTAGAAGACTCCCTGTATACATGTTTCGATTGCCTTGCT
CCCGGCGGTCGCCTTGCAGTCATCTCCTTCCACAGTTTGGAGGATAGGGTTGTGAAGCAAACATTCCTTAACATCATTAACCCCAAAACAGAAGGAGATGAAGATGGAGG
AGAGGTCACAAGGATTATTGAAGAAAATGAAGAATGGATTAAACAAACTGTTAAGGGTTCGAAAGGTACAGTCCTCACAAAAAGACCGATAACTCCATCGGAAGAGGAAG
AGCGGTTGAATCGGCGGTCTAGGAGTGCTAAGCTGAGAGTAATTCAGAAGAATGATGTTTGCTGATGGAAAAGCAGTTAGTATTCTGACTTCATTACCATAACAAATATG
ATCGGGTGCACTCAGCAAGACCGACCCAATATGATCGACCGTTGCCATTATGTAACGGGGACTGGTAAGGAGATGTTACACACCATTCGTACCAAACCTGTGAAACCGCA
CATTTTGTCCCATAAGTTGACTAATTAAATATTTGTCTAAACACTACCACTTCAACTTCAAAAATTTTGTATCTAAAAGAACTTTATGAAATTTTATATTTGTT

Protein sequence

Show/hide protein sequence

MAFRSSMAKFSLFSSFSSQSLRFQHVFFTCTTPPPRIFRFCSNSTAADVKNKAKKEKHKKSKNLKASTSVSKLALVKEKRRTRSTKEFDENAIQIGDTTAHIPVMLAEVL
DVFSGSSGRPLHSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISALFCEDSDLKAYMVLKNFKYVKSLLADSDEKPLDPGVHGILMDLGMSSMQVDDP
ERGFRVLGDGPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTELVDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELKV
LEDSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEGDEDGGEVTRIIEENEEWIKQTVKGSKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQKNDVC

Clc05G19240 (gene) of Watermelon (cordophanus) v2 genome