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Clc05G19290 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G19290
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein FAM32A-like
Genome locationClcChr05:28224856..28227085
RNA-Seq ExpressionClc05G19290
SyntenyClc05G19290
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
InterPro domainsIPR013865 - Protein FAM32A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466328.1 PREDICTED: protein FAM32A-like [Cucumis melo]4.2e-3062.9Show/hide
Query:  ESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRD
        + +R+K+++ +K+++ +      FS   R      L GRNI SLVDCSKE + D +G  GKGL   Y+DMLT AERRYLQQWEKIDLQRM+KMA KSHRD
Subjt:  ESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRD

Query:  RIQEFNQYLANLSEHHDIPKVGPG
        RIQEFNQ LANLSEHHDIPKVGPG
Subjt:  RIQEFNQYLANLSEHHDIPKVGPG

XP_011652514.1 protein FAM32A-like [Cucumis sativus]5.6e-2760.48Show/hide
Query:  ESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRD
        + +R+K+++ ++ +E    +R+             L GRNI SLVDCSKE      G +GKGL   YDDMLT AERRYL+QWEKI+LQRMAKMA KSHRD
Subjt:  ESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRD

Query:  RIQEFNQYLANLSEHHDIPKVGPG
        RIQEFNQ LANLSEHHDIPKVGPG
Subjt:  RIQEFNQYLANLSEHHDIPKVGPG

XP_022152816.1 protein FAM32A-like [Momordica charantia]1.1e-3353.99Show/hide
Query:  MRAEYDKFPEPSLEQVRKIVIGKDVGVRECGGWKVKAERESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGK
        M A++D+FPEPSLE V KIVIG           K++ + +++  K     K+++ +   +QF +  +  R      GRN  SLVDCSKE++N+ + +  K
Subjt:  MRAEYDKFPEPSLEQVRKIVIGKDVGVRECGGWKVKAERESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGK

Query:  GLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG
        G Y  YDD LTPAERRYLQQWEKIDL+RMA+MA KSHR RI EFNQYL NLSEHHDIPKVGPG
Subjt:  GLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG

XP_023536135.1 LOW QUALITY PROTEIN: protein FAM32A-like [Cucurbita pepo subsp. pepo]1.1e-2751.68Show/hide
Query:  QVRKIVIGKDVGVRECGGWKVKAERESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAE
        Q R IVIGKDV VR+    K++ + +++  +     K++++++    F       RSLIRLLG N  SLVDCSKEN+N              +DMLTP E
Subjt:  QVRKIVIGKDVGVRECGGWKVKAERESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAE

Query:  RRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG
        R YLQQ EKID+QR+AKMARKSHRD+I EFNQYL +L+EH++IPKVGPG
Subjt:  RRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG

XP_038897245.1 protein FAM32A-like [Benincasa hispida]6.7e-2883.54Show/hide
Query:  SKENIND--VNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG
        S +NI+D  ++GDNGKG Y A D+MLTPAERRYLQQWEKIDLQRMA+MA KSHRDRIQEFNQYLANLSEHHDIPKVGPG
Subjt:  SKENIND--VNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG

TrEMBL top hitse value%identityAlignment
A0A059CQQ3 Uncharacterized protein2.8e-2448.59Show/hide
Query:  GKDVGVRECGGWKVKAERESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQW
        GK + V+  G W       ++ +K+ +N+K+++A    R+F  +           G  + S  D   E +ND   D+G+ L   YDD LTPAERR+LQQ 
Subjt:  GKDVGVRECGGWKVKAERESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQW

Query:  EKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG
        EKI+L+R+AKMA KSHRDR+QEFNQYLANLSEH+DIPKVGPG
Subjt:  EKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG

A0A0A0LDT5 Uncharacterized protein2.7e-2760.48Show/hide
Query:  ESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRD
        + +R+K+++ ++ +E    +R+             L GRNI SLVDCSKE      G +GKGL   YDDMLT AERRYL+QWEKI+LQRMAKMA KSHRD
Subjt:  ESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRD

Query:  RIQEFNQYLANLSEHHDIPKVGPG
        RIQEFNQ LANLSEHHDIPKVGPG
Subjt:  RIQEFNQYLANLSEHHDIPKVGPG

A0A1S3CQZ2 protein FAM32A-like2.0e-3062.9Show/hide
Query:  ESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRD
        + +R+K+++ +K+++ +      FS   R      L GRNI SLVDCSKE + D +G  GKGL   Y+DMLT AERRYLQQWEKIDLQRM+KMA KSHRD
Subjt:  ESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRD

Query:  RIQEFNQYLANLSEHHDIPKVGPG
        RIQEFNQ LANLSEHHDIPKVGPG
Subjt:  RIQEFNQYLANLSEHHDIPKVGPG

A0A5A7TBK8 Protein FAM32A-like2.0e-3062.9Show/hide
Query:  ESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRD
        + +R+K+++ +K+++ +      FS   R      L GRNI SLVDCSKE + D +G  GKGL   Y+DMLT AERRYLQQWEKIDLQRM+KMA KSHRD
Subjt:  ESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRD

Query:  RIQEFNQYLANLSEHHDIPKVGPG
        RIQEFNQ LANLSEHHDIPKVGPG
Subjt:  RIQEFNQYLANLSEHHDIPKVGPG

A0A6J1DIW7 protein FAM32A-like5.1e-3453.99Show/hide
Query:  MRAEYDKFPEPSLEQVRKIVIGKDVGVRECGGWKVKAERESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGK
        M A++D+FPEPSLE V KIVIG           K++ + +++  K     K+++ +   +QF +  +  R      GRN  SLVDCSKE++N+ + +  K
Subjt:  MRAEYDKFPEPSLEQVRKIVIGKDVGVRECGGWKVKAERESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGK

Query:  GLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG
        G Y  YDD LTPAERRYLQQWEKIDL+RMA+MA KSHR RI EFNQYL NLSEHHDIPKVGPG
Subjt:  GLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG

SwissProt top hitse value%identityAlignment
A6QR31 Protein FAM32A2.6e-0643.4Show/hide
Query:  DMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKV
        D  TPA+  + +  EK  ++R+ K A K+H+ R+++FN++L  L+EH+DIPKV
Subjt:  DMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKV

Q5R9E5 Protein FAM32A2.6e-0643.4Show/hide
Query:  DMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKV
        D  TPA+  + +  EK  ++R+ K A K+H+ R+++FN++L  L+EH+DIPKV
Subjt:  DMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKV

Q6GQN4 Protein FAM32A-like1.4e-0740.3Show/hide
Query:  VNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKV
        +  +N +G   AY D  TPA+  + +  EK  ++R+ K A K+H+ R+++FN++L  L+EH+DIPKV
Subjt:  VNGDNGKGLYVAYDDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKV

Q9CR80 Protein FAM32A2.6e-0643.4Show/hide
Query:  DMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKV
        D  TPA+  + +  EK  ++R+ K A K+H+ R+++FN++L  L+EH+DIPKV
Subjt:  DMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKV

Q9Y421 Protein FAM32A2.6e-0643.4Show/hide
Query:  DMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKV
        D  TPA+  + +  EK  ++R+ K A K+H+ R+++FN++L  L+EH+DIPKV
Subjt:  DMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKV

Arabidopsis top hitse value%identityAlignment
AT1G16810.1 unknown protein6.0e-1970.18Show/hide
Query:  DDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG
        DD LTPAERRY++Q +++D+Q++AK A KSHR+RI++FNQYLAN+SEH+DIPKVGPG
Subjt:  DDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG

AT1G16810.2 unknown protein6.0e-1970.18Show/hide
Query:  DDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG
        DD LTPAERRY++Q +++D+Q++AK A KSHR+RI++FNQYLAN+SEH+DIPKVGPG
Subjt:  DDMLTPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGCAGAGTACGACAAGTTTCCAGAGCCTTCGCTCGAACAGGTTCGGAAAATCGTAATTGGGAAAGATGTCGGAGTACGAGAATGTGGTGGTTGGAAAGTTAAGGC
TGAAAGGGAAAGCGTTAGGCGTAAAAGGAGACGGAATGAAAAAGAAGAAGAAGCCGAAGAAGCAATTCGACAATTTTTCTCAACTTGTGAGAGAAGACGATCTCTCATCA
GATTGTTAGGAAGGAACATCGCTTCATTGGTTGATTGTTCTAAAGAGAACATAAACGATGTCAATGGAGACAATGGCAAAGGGTTGTATGTTGCATACGACGATATGCTA
ACGCCGGCTGAGAGGCGATATCTTCAGCAATGGGAGAAGATTGATCTTCAAAGAATGGCCAAGATGGCCCGCAAATCTCATCGGGATCGGATTCAAGAATTCAATCAATA
CCTGGCCAATTTGAGTGAGCACCATGACATTCCTAAAGTCGGGCCTGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGCAGAGTACGACAAGTTTCCAGAGCCTTCGCTCGAACAGGTTCGGAAAATCGTAATTGGGAAAGATGTCGGAGTACGAGAATGTGGTGGTTGGAAAGTTAAGGC
TGAAAGGGAAAGCGTTAGGCGTAAAAGGAGACGGAATGAAAAAGAAGAAGAAGCCGAAGAAGCAATTCGACAATTTTTCTCAACTTGTGAGAGAAGACGATCTCTCATCA
GATTGTTAGGAAGGAACATCGCTTCATTGGTTGATTGTTCTAAAGAGAACATAAACGATGTCAATGGAGACAATGGCAAAGGGTTGTATGTTGCATACGACGATATGCTA
ACGCCGGCTGAGAGGCGATATCTTCAGCAATGGGAGAAGATTGATCTTCAAAGAATGGCCAAGATGGCCCGCAAATCTCATCGGGATCGGATTCAAGAATTCAATCAATA
CCTGGCCAATTTGAGTGAGCACCATGACATTCCTAAAGTCGGGCCTGGCTAA
Protein sequenceShow/hide protein sequence
MRAEYDKFPEPSLEQVRKIVIGKDVGVRECGGWKVKAERESVRRKRRRNEKEEEAEEAIRQFFSTCERRRSLIRLLGRNIASLVDCSKENINDVNGDNGKGLYVAYDDML
TPAERRYLQQWEKIDLQRMAKMARKSHRDRIQEFNQYLANLSEHHDIPKVGPG