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Clc05G19320 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G19320
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionflowering-promoting factor 1-like protein 1
Genome locationClcChr05:28251602..28252154
RNA-Seq ExpressionClc05G19320
SyntenyClc05G19320
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136318.1 flowering-promoting factor 1-like protein 2 [Cucumis sativus]1.2e-5892.68Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG-----HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFS
        MSGVWVFRSNGVMRLVENSQAGDDYSSDG     HHH  GGGRKKVLVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFS
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG-----HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFS

Query:  KFNSIYMYDLVIKNPNVFHVREP
        KFNSIYM+DLVIKNPNVFHVREP
Subjt:  KFNSIYMYDLVIKNPNVFHVREP

XP_022937028.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]5.8e-5891.74Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG---HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
        MSGVWVFRSNGVMRLVEN+QAG DYSSDG   HHH  GGGRKK+LVHLPSGQPV+SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG---HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF

Query:  NSIYMYDLVIKNPNVFHVREP
        NSIYMYDLV+KNPNVFHVREP
Subjt:  NSIYMYDLVIKNPNVFHVREP

XP_022976219.1 flowering-promoting factor 1-like protein 2 [Cucurbita maxima]3.4e-5893.28Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG-HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNS
        MSGVWVFRSNGVMRLVEN+QAG DYSSDG HHH  GGGRKK+LVHLPSGQPV+SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNS
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG-HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNS

Query:  IYMYDLVIKNPNVFHVREP
        IYMYDLV+KNPNVFHVREP
Subjt:  IYMYDLVIKNPNVFHVREP

XP_023536365.1 flowering-promoting factor 1-like protein 2 [Cucurbita pepo subsp. pepo]7.6e-5890.98Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG----HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSK
        MSGVWVFRSNGVMRLVEN+QAG DYSSDG    HHH  GGGRKK+LVHLPSGQPV+SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSK
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG----HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSK

Query:  FNSIYMYDLVIKNPNVFHVREP
        FNSIYMYDLV+KNPNVFHVREP
Subjt:  FNSIYMYDLVIKNPNVFHVREP

XP_038899381.1 flowering-promoting factor 1-like protein 2 [Benincasa hispida]6.9e-5994.21Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGH---HHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
        MSGVWVFRSNGVMRLVENSQAGDDYSSDGH   HH  GGGRKK+LVHLPSGQ VSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGH---HHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF

Query:  NSIYMYDLVIKNPNVFHVREP
        NSIYMYDLVIKNPNVFHVREP
Subjt:  NSIYMYDLVIKNPNVFHVREP

TrEMBL top hitse value%identityAlignment
A0A0A0LHE6 Uncharacterized protein5.7e-5992.68Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG-----HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFS
        MSGVWVFRSNGVMRLVENSQAGDDYSSDG     HHH  GGGRKKVLVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFS
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG-----HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFS

Query:  KFNSIYMYDLVIKNPNVFHVREP
        KFNSIYM+DLVIKNPNVFHVREP
Subjt:  KFNSIYMYDLVIKNPNVFHVREP

A0A1S3CSB1 flowering-promoting factor 1-like protein 21.1e-5787.6Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHH-----------TAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
        MSGVWVFRSNGVMRLVENSQAGDDYSSDGHH              GGGRKKVLVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHH-----------TAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS

Query:  LPMDFSKFNSIYMYDLVIKNPNVFHVREP
        LPMDFSKFNSIYMYDLV+KNPNVFHVREP
Subjt:  LPMDFSKFNSIYMYDLVIKNPNVFHVREP

A0A5A7UF14 Flowering-promoting factor 1-like protein 21.1e-5787.6Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHH-----------TAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
        MSGVWVFRSNGVMRLVENSQAGDDYSSDGHH              GGGRKKVLVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHH-----------TAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS

Query:  LPMDFSKFNSIYMYDLVIKNPNVFHVREP
        LPMDFSKFNSIYMYDLV+KNPNVFHVREP
Subjt:  LPMDFSKFNSIYMYDLVIKNPNVFHVREP

A0A6J1FEW7 flowering-promoting factor 1-like protein 22.8e-5891.74Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG---HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
        MSGVWVFRSNGVMRLVEN+QAG DYSSDG   HHH  GGGRKK+LVHLPSGQPV+SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG---HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF

Query:  NSIYMYDLVIKNPNVFHVREP
        NSIYMYDLV+KNPNVFHVREP
Subjt:  NSIYMYDLVIKNPNVFHVREP

A0A6J1IMX4 flowering-promoting factor 1-like protein 21.7e-5893.28Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG-HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNS
        MSGVWVFRSNGVMRLVEN+QAG DYSSDG HHH  GGGRKK+LVHLPSGQPV+SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNS
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDG-HHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNS

Query:  IYMYDLVIKNPNVFHVREP
        IYMYDLV+KNPNVFHVREP
Subjt:  IYMYDLVIKNPNVFHVREP

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 11.6e-3462.18Show/hide
Query:  MSGVWVFRSNGVMRLVEN-SQAGDDYSSDGHHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFN
        MSGVWVF+ NGV+RLVEN +Q+G D  +          R+KV+V+LP+G+ VSSY  L++IL+ LGWERY+  GD D  QFHKRSSIDLISLP DF+KFN
Subjt:  MSGVWVFRSNGVMRLVEN-SQAGDDYSSDGHHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFN

Query:  SIYMYDLVIKNPNVFHVRE
        S+YMYD+V+KNPN FHVR+
Subjt:  SIYMYDLVIKNPNVFHVRE

O24340 Flowering-promoting factor 16.1e-3461.34Show/hide
Query:  MSGVWVFRSNGVMRLVEN-SQAGDDYSSDGHHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFN
        MSGVWVF+ NGV+RLVEN +Q+G D +S          R+KV+V+LP+G+ +SSY  L++IL  LGWERY+  GD D  QFHKRSSIDLISLP DF+KF+
Subjt:  MSGVWVFRSNGVMRLVEN-SQAGDDYSSDGHHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFN

Query:  SIYMYDLVIKNPNVFHVRE
        S+YMYD+V+KNPN FHVR+
Subjt:  SIYMYDLVIKNPNVFHVRE

Q5Q0B3 Flowering-promoting factor 1-like protein 12.0e-3764.57Show/hide
Query:  MSGVWVFRSNGVMRLVE---NSQAGDDYSSDGHHHTAGGG-----RKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISL
        MSGVWVF  NGVMRLVE   N  AGD   S     ++GG      R+K+LVHLPS + VSSYG L+KIL+ LGWERYY GD      QFHKR+SIDLISL
Subjt:  MSGVWVFRSNGVMRLVE---NSQAGDDYSSDGHHHTAGGG-----RKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISL

Query:  PMDFSKFNSIYMYDLVIKNPNVFHVRE
        P DFSKFNSI+MYD+V+KNPNVFHVR+
Subjt:  PMDFSKFNSIYMYDLVIKNPNVFHVRE

Q9LGE3 Flowering-promoting factor 1-like protein 14.1e-3060.5Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHHTAG----GGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSK
        MSGVWVF+ NGV+RLVE  QA           TAG    GGR+K LVH PSGQ VSSY  L+  L  LGWERYYE DP  FQFHKR S+DLISLP DFS 
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHHTAG----GGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSK

Query:  FNSIYMYDLVIKNPNVFHV
        F+S++MYD+V+KN + F V
Subjt:  FNSIYMYDLVIKNPNVFHV

Q9LXB5 Flowering-promoting factor 1-like protein 21.7e-3663.25Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSI
        MSGVWVF +NGV+RLVEN       S+  H      GR+ VLV+LP+G+ VSSY  L++IL  LGWERY+ GD D  Q+HKRSSIDLISLP DFSKFNS+
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSI

Query:  YMYDLVIKNPNVFHVRE
        YMYD+V+KNPN FHVR+
Subjt:  YMYDLVIKNPNVFHVRE

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 11.4e-3864.57Show/hide
Query:  MSGVWVFRSNGVMRLVE---NSQAGDDYSSDGHHHTAGGG-----RKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISL
        MSGVWVF  NGVMRLVE   N  AGD   S     ++GG      R+K+LVHLPS + VSSYG L+KIL+ LGWERYY GD      QFHKR+SIDLISL
Subjt:  MSGVWVFRSNGVMRLVE---NSQAGDDYSSDGHHHTAGGG-----RKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISL

Query:  PMDFSKFNSIYMYDLVIKNPNVFHVRE
        P DFSKFNSI+MYD+V+KNPNVFHVR+
Subjt:  PMDFSKFNSIYMYDLVIKNPNVFHVRE

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)1.2e-3763.25Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSI
        MSGVWVF +NGV+RLVEN       S+  H      GR+ VLV+LP+G+ VSSY  L++IL  LGWERY+ GD D  Q+HKRSSIDLISLP DFSKFNS+
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSI

Query:  YMYDLVIKNPNVFHVRE
        YMYD+V+KNPN FHVR+
Subjt:  YMYDLVIKNPNVFHVRE

AT5G24860.1 flowering promoting factor 11.1e-3562.18Show/hide
Query:  MSGVWVFRSNGVMRLVEN-SQAGDDYSSDGHHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFN
        MSGVWVF+ NGV+RLVEN +Q+G D  +          R+KV+V+LP+G+ VSSY  L++IL+ LGWERY+  GD D  QFHKRSSIDLISLP DF+KFN
Subjt:  MSGVWVFRSNGVMRLVEN-SQAGDDYSSDGHHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFN

Query:  SIYMYDLVIKNPNVFHVRE
        S+YMYD+V+KNPN FHVR+
Subjt:  SIYMYDLVIKNPNVFHVRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGCGTTTGGGTTTTTCGATCCAACGGCGTGATGCGCCTCGTTGAAAACTCTCAAGCCGGCGACGATTACTCCTCCGACGGTCACCACCATACCGCCGGTGGCGG
AAGAAAGAAGGTTCTAGTTCATCTTCCTTCAGGGCAACCGGTTTCTTCCTACGGATTTCTTCAAAAGATTCTAGAAGGTCTGGGATGGGAACGATATTACGAAGGCGATC
CAGATTTCTTCCAATTTCACAAGCGATCTTCTATTGATCTCATTTCCCTTCCAATGGACTTCTCCAAATTCAATTCCATTTATATGTACGATCTCGTCATCAAAAACCCT
AACGTCTTTCACGTTCGAGAACCCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAACTAACCATTGGATCACAAAAATGTCAGGCGTTTGGGTTTTTCGATCCAACGGCGTGATGCGCCTCGTTGAAAACTCTCAAGCCGGCGACGATTACTCCT
CCGACGGTCACCACCATACCGCCGGTGGCGGAAGAAAGAAGGTTCTAGTTCATCTTCCTTCAGGGCAACCGGTTTCTTCCTACGGATTTCTTCAAAAGATTCTAGAAGGT
CTGGGATGGGAACGATATTACGAAGGCGATCCAGATTTCTTCCAATTTCACAAGCGATCTTCTATTGATCTCATTTCCCTTCCAATGGACTTCTCCAAATTCAATTCCAT
TTATATGTACGATCTCGTCATCAAAAACCCTAACGTCTTTCACGTTCGAGAACCCTAATTTTTTATTTTTTTTTTTATTTCATTTTCCCAACCCTTTTTTCTTTCCTGTT
TTAATTTCATTTCCATTCTCTCTCTCTCTGTTTTTCTTTTTTGTGTAATAATTATAATAATAATCATATTGTAAGCTTCAATCTCTGTACGTAAGAATATGCGTAGTCTC
TGG
Protein sequenceShow/hide protein sequence
MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHHTAGGGRKKVLVHLPSGQPVSSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVIKNP
NVFHVREP