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Clc05G19760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G19760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:28652287..28656848
RNA-Seq ExpressionClc05G19760
SyntenyClc05G19760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038897218.1 uncharacterized protein LOC120085348 [Benincasa hispida]1.6e-1375.47Show/hide
Query:  LTSLPAVLVLHLYCTFGYYLDHELLKVMAGQRGPSPQIVHYISVSTLDYFCWF
        + SLPAVLVLHLY TFGY L HELL+ MAGQRGPS Q V+Y SV TLDYFCW+
Subjt:  LTSLPAVLVLHLYCTFGYYLDHELLKVMAGQRGPSPQIVHYISVSTLDYFCWF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTCCGGCGGTTTGCAACTTTGCTAGGGCAAACCTGGGGATCGTGGAGGCATCCGGTTGGAGAACCGGCTGCGTAATGGTCGAATCTTCTACGCATTTGAGGCA
TGATTCGTCCTCGTCGTCACTTTTAGTCATTGCACGCTTAGAGTTCTTGAATCGGATTCAATACGAGCCTCTCGGCGAATTGGGGATAGACAGGTCCGATCATGAGTTCT
TGTCGCGCCGAACAGCAGCGGTGGATGTCTGCGGAAATTTGACGAGTCTACCTGCAGTTCTTGTTCTGCATTTGTACTGTACATTTGGGTACTATTTAGATCATGAGCTG
CTTAAGGTTATGGCGGGTCAGAGGGGACCATCACCACAAATTGTGCATTATATCAGTGTCAGCACGTTGGACTATTTCTGCTGGTTCCGGCATGCTCCCTTTCATTCGGA
AGGATATCAATTGCTCCAGTTCAGAATGGAGAAGGTGACTGATCCACGACTATATCCTGTAGACGGTCGAGAGGAAGGTGAAAATGGAATTGAACCGACAGATATGGGGG
ACCCAATTGATAAATTTCATGAGGAGGATCGAGATGGCGTCATTGACTTGAGAAGAGAAAGGAAAGGGAAGAGAGACAAAAGAGTTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTCCGGCGGTTTGCAACTTTGCTAGGGCAAACCTGGGGATCGTGGAGGCATCCGGTTGGAGAACCGGCTGCGTAATGGTCGAATCTTCTACGCATTTGAGGCA
TGATTCGTCCTCGTCGTCACTTTTAGTCATTGCACGCTTAGAGTTCTTGAATCGGATTCAATACGAGCCTCTCGGCGAATTGGGGATAGACAGGTCCGATCATGAGTTCT
TGTCGCGCCGAACAGCAGCGGTGGATGTCTGCGGAAATTTGACGAGTCTACCTGCAGTTCTTGTTCTGCATTTGTACTGTACATTTGGGTACTATTTAGATCATGAGCTG
CTTAAGGTTATGGCGGGTCAGAGGGGACCATCACCACAAATTGTGCATTATATCAGTGTCAGCACGTTGGACTATTTCTGCTGGTTCCGGCATGCTCCCTTTCATTCGGA
AGGATATCAATTGCTCCAGTTCAGAATGGAGAAGGTGACTGATCCACGACTATATCCTGTAGACGGTCGAGAGGAAGGTGAAAATGGAATTGAACCGACAGATATGGGGG
ACCCAATTGATAAATTTCATGAGGAGGATCGAGATGGCGTCATTGACTTGAGAAGAGAAAGGAAAGGGAAGAGAGACAAAAGAGTTAATTGA
Protein sequenceShow/hide protein sequence
MDFPAVCNFARANLGIVEASGWRTGCVMVESSTHLRHDSSSSSLLVIARLEFLNRIQYEPLGELGIDRSDHEFLSRRTAAVDVCGNLTSLPAVLVLHLYCTFGYYLDHEL
LKVMAGQRGPSPQIVHYISVSTLDYFCWFRHAPFHSEGYQLLQFRMEKVTDPRLYPVDGREEGENGIEPTDMGDPIDKFHEEDRDGVIDLRRERKGKRDKRVN