; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G19970 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G19970
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRRM domain-containing protein
Genome locationClcChr05:28832509..28836653
RNA-Seq ExpressionClc05G19970
SyntenyClc05G19970
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141330.1 RNA-binding protein 2 isoform X1 [Cucumis sativus]1.4e-10984.75Show/hide
Query:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI--PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFED
        MGDDAYTRYAAS DRAGS ARSGLSTYSEAPPL SYPNSTSIDQWH   PPDY+ +DTNSLGPGAYGYTD+G     PEPVIGGVTSGGSA GY SPF D
Subjt:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI--PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFED

Query:  SLASQRQDIVVGSSPGVMGMADIGHERANSLSL-RTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFV
        SLASQRQDI VGSSPGVMG ADIGHERANSL+L RT ECDP+  RESN+LFV GLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRR GDKAMVLCFVEFV
Subjt:  SLASQRQDIVVGSSPGVMGMADIGHERANSLSL-RTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFV

Query:  EARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPF
        EA++++AAME LQGYKFDDKKPDSP LKIQFAHFPF
Subjt:  EARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPF

XP_008452748.1 PREDICTED: RNA-binding protein 2-like isoform X1 [Cucumis melo]1.4e-10985.59Show/hide
Query:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDS
        MGDDAYTRYAAS DRAGS ARSGLSTYSEAPPL SYPNSTSIDQWH  PPDY+ +DTNSLGPGAYGYTD+G     PEPVIGGVTSG SA GY SPF DS
Subjt:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDS

Query:  LASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVE
        LASQRQDI VGSSPGVMG ADIGHERANSLS +RT ECDP S RESNILFV GLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRR GDKA VLCFVEFVE
Subjt:  LASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVE

Query:  ARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR
        A++++AAME LQGYKFDDKKPDSPALKIQFAHFPFR
Subjt:  ARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR

XP_038896812.1 RNA-binding protein 2-like isoform X1 [Benincasa hispida]1.5e-11690.64Show/hide
Query:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSL
        MGDDAYTRYAAS DRAGS ARSGLSTYSEAPPLTSYPNSTSIDQWHI PDYLQKDTNS+GPGAYGYTDVG I N PEPVIG V SG SAKGYTSPFEDSL
Subjt:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSL

Query:  ASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEAR
        ASQRQDI VGSSPGVMGMAD  HERANSLSLRT E DPNSSRESNILFV GLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRR GDKAMVLCFVEF+EAR
Subjt:  ASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEAR

Query:  YARAAMETLQ-GYKFDDKKPDSPALKIQFAHFPFR
        YAR AME LQ GYKFDDKKPDSP+LKIQFAHFPFR
Subjt:  YARAAMETLQ-GYKFDDKKPDSPALKIQFAHFPFR

XP_038896813.1 RNA-binding protein 2-like isoform X2 [Benincasa hispida]6.1e-11891.03Show/hide
Query:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSL
        MGDDAYTRYAAS DRAGS ARSGLSTYSEAPPLTSYPNSTSIDQWHI PDYLQKDTNS+GPGAYGYTDVG I N PEPVIG V SG SAKGYTSPFEDSL
Subjt:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSL

Query:  ASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEAR
        ASQRQDI VGSSPGVMGMAD  HERANSLSLRT E DPNSSRESNILFV GLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRR GDKAMVLCFVEF+EAR
Subjt:  ASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEAR

Query:  YARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR
        YAR AME LQGYKFDDKKPDSP+LKIQFAHFPFR
Subjt:  YARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR

XP_038896814.1 nuclear speckle RNA-binding protein B-like isoform X3 [Benincasa hispida]1.1e-11490.21Show/hide
Query:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSL
        MGDDAYTRYAAS DR GS ARSGLSTYSEAPPLTSYPNSTSIDQWHI PDYLQKDTNS+GPGAYGYTDVG I N PEPVIG V SG SAKGYTSPFEDSL
Subjt:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSL

Query:  ASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEAR
        ASQRQDI VGSSPGVMGMAD  HERANSLSLRT E DPNSSRESNILFV GLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRR GDKAMVLCFVEF+EAR
Subjt:  ASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEAR

Query:  YARAAMETLQ-GYKFDDKKPDSPALKIQFAHFPFR
        YAR AME LQ GYKFDDKKPDSP+LKIQFAHFPFR
Subjt:  YARAAMETLQ-GYKFDDKKPDSPALKIQFAHFPFR

TrEMBL top hitse value%identityAlignment
A0A0A0L0S1 RRM domain-containing protein6.6e-11084.75Show/hide
Query:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI--PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFED
        MGDDAYTRYAAS DRAGS ARSGLSTYSEAPPL SYPNSTSIDQWH   PPDY+ +DTNSLGPGAYGYTD+G     PEPVIGGVTSGGSA GY SPF D
Subjt:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI--PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFED

Query:  SLASQRQDIVVGSSPGVMGMADIGHERANSLSL-RTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFV
        SLASQRQDI VGSSPGVMG ADIGHERANSL+L RT ECDP+  RESN+LFV GLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRR GDKAMVLCFVEFV
Subjt:  SLASQRQDIVVGSSPGVMGMADIGHERANSLSL-RTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFV

Query:  EARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPF
        EA++++AAME LQGYKFDDKKPDSP LKIQFAHFPF
Subjt:  EARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPF

A0A1S3BU06 RNA-binding protein 2-like isoform X16.6e-11085.59Show/hide
Query:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDS
        MGDDAYTRYAAS DRAGS ARSGLSTYSEAPPL SYPNSTSIDQWH  PPDY+ +DTNSLGPGAYGYTD+G     PEPVIGGVTSG SA GY SPF DS
Subjt:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDS

Query:  LASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVE
        LASQRQDI VGSSPGVMG ADIGHERANSLS +RT ECDP S RESNILFV GLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRR GDKA VLCFVEFVE
Subjt:  LASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVE

Query:  ARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR
        A++++AAME LQGYKFDDKKPDSPALKIQFAHFPFR
Subjt:  ARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR

A0A1S3BUL5 RNA-binding protein 2-like isoform X24.7e-10885.17Show/hide
Query:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDS
        MGDDAYTRYAAS DR GS ARSGLSTYSEAPPL SYPNSTSIDQWH  PPDY+ +DTNSLGPGAYGYTD+G     PEPVIGGVTSG SA GY SPF DS
Subjt:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDS

Query:  LASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVE
        LASQRQDI VGSSPGVMG ADIGHERANSLS +RT ECDP S RESNILFV GLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRR GDKA VLCFVEFVE
Subjt:  LASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVE

Query:  ARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR
        A++++AAME LQGYKFDDKKPDSPALKIQFAHFPFR
Subjt:  ARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR

A0A5D3D938 RNA-binding protein 2-like isoform X16.6e-11085.59Show/hide
Query:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDS
        MGDDAYTRYAAS DRAGS ARSGLSTYSEAPPL SYPNSTSIDQWH  PPDY+ +DTNSLGPGAYGYTD+G     PEPVIGGVTSG SA GY SPF DS
Subjt:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHI-PPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDS

Query:  LASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVE
        LASQRQDI VGSSPGVMG ADIGHERANSLS +RT ECDP S RESNILFV GLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRR GDKA VLCFVEFVE
Subjt:  LASQRQDIVVGSSPGVMGMADIGHERANSLS-LRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVE

Query:  ARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR
        A++++AAME LQGYKFDDKKPDSPALKIQFAHFPFR
Subjt:  ARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR

A0A6J1J4R2 RNA-binding protein 2-like1.8e-10482.91Show/hide
Query:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSL
        MGDDAYTRYAAS DRAGS ARSGLS YSEAPPLTSYPNSTSID W IPPDYLQK+T+S GPG YGYTDVG I N PEPVIGGVTSG SA G TSPF D+ 
Subjt:  MGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNSLGPGAYGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSL

Query:  ASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEAR
        A QR DI VGSSPG+M MAD GHE+ANSL LR  E  P S+ ESNILFV GLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRR GDKA VLCFVEF+EAR
Subjt:  ASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEAR

Query:  YARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR
        Y+RAAME LQGYKFDDKKPDS ALKIQFAHFPFR
Subjt:  YARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A1.8e-1945.65Show/hide
Query:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPALKIQFAHFP
        S  SN L+V GLP++C+RREV H+FRPF+GY+++R+V K+ +      +VLCFV+F     A  A+  LQGY+ D+ + DS  L++QF+  P
Subjt:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPALKIQFAHFP

F4HWF9 Nuclear speckle RNA-binding protein B2.3e-1939.82Show/hide
Query:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKP
        D+G  + +S+     E  P     SN L+V GLP++C+RREV H+FRPF+GY+++R+V ++ +       VLCFV+F  +  A  A+  LQ Y+ D+ +P
Subjt:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKP

Query:  DSPALKIQFAHFP
        DS  L++QF   P
Subjt:  DSPALKIQFAHFP

G7ID19 RNA-binding protein 23.6e-2037.35Show/hide
Query:  VIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADI----------GHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPF
        VIGGV   G A+G       SL        +G   GV G  D+          G    +++S    E  P     S+ L+V GLP+D T+REV H+FRPF
Subjt:  VIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADI----------GHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPF

Query:  IGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR
        +GY+++R+V KE +  G   ++LCFV+F     A  A+  LQGYK D+  P+S  L++QF+  P R
Subjt:  IGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPFR

Q6JB11 Protein MATERNALLY EXPRESSED GENE 51.1e-1648.75Show/hide
Query:  SNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPA
        S+ L++ GLP +CTRREV H+FRPF+G++++R+V+KE R  G    VLCFV+F     A  A+E LQG+  DD    +PA
Subjt:  SNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPA

Q8H0P8 RNA-binding protein 14.2e-2149.44Show/hide
Query:  SNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPALKIQFAHFP
        S  L++ GLP+DCTRREV H+FRPF+GY+++R+V KE +  GD  ++LCFV+F     A  A+  LQGYK D+  P+S  L++QF+ +P
Subjt:  SNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPALKIQFAHFP

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.6e-2039.82Show/hide
Query:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKP
        D+G  + +S+     E  P     SN L+V GLP++C+RREV H+FRPF+GY+++R+V ++ +       VLCFV+F  +  A  A+  LQ Y+ D+ +P
Subjt:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKP

Query:  DSPALKIQFAHFP
        DS  L++QF   P
Subjt:  DSPALKIQFAHFP

AT1G21320.2 nucleotide binding;nucleic acid binding1.6e-2039.82Show/hide
Query:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKP
        D+G  + +S+     E  P     SN L+V GLP++C+RREV H+FRPF+GY+++R+V ++ +       VLCFV+F  +  A  A+  LQ Y+ D+ +P
Subjt:  DIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKP

Query:  DSPALKIQFAHFP
        DS  L++QF   P
Subjt:  DSPALKIQFAHFP

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-2045.65Show/hide
Query:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPALKIQFAHFP
        S  SN L+V GLP++C+RREV H+FRPF+GY+++R+V K+ +      +VLCFV+F     A  A+  LQGY+ D+ + DS  L++QF+  P
Subjt:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPALKIQFAHFP

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-2045.65Show/hide
Query:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPALKIQFAHFP
        S  SN L+V GLP++C+RREV H+FRPF+GY+++R+V K+ +      +VLCFV+F     A  A+  LQGY+ D+ + DS  L++QF+  P
Subjt:  SRESNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPALKIQFAHFP

AT2G30260.1 U2 small nuclear ribonucleoprotein B2.5e-0532.89Show/hide
Query:  SNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKP
        +NILF+  LP + T   +  LF  + G+K+IR++  +P         + FVE+ +   A  AM+ LQG+K   + P
Subjt:  SNILFVGGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAAGTCCAAAAACAACACTATGCTAATAAGGCCCAAAGTAAGAATTATCCACGCCTCAAGCGTGGGAGAAGTGGAGAAGAGACGAGGCCGGGGGAGGGTTGCGG
TTGCAGCCGAAGCGGAGCAGGCGGCCAAGCCATGGGAGACGATGCTTATACCAGATACGCCGCCTCAGTAGATAGAGCAGGAAGTGCAGCGAGGTCTGGCCTTTCAACCT
ACTCTGAAGCACCTCCTTTGACATCTTATCCTAATTCGACCTCTATTGATCAGTGGCACATCCCTCCTGATTATTTGCAAAAAGATACCAATTCGTTAGGACCTGGAGCT
TATGGATATACTGACGTAGGAAACATTGGTAATTGTCCGGAACCAGTTATTGGCGGTGTGACATCCGGAGGGAGTGCAAAAGGGTACACATCTCCTTTCGAAGATTCGTT
AGCAAGTCAAAGACAAGATATTGTAGTGGGCAGTAGTCCAGGAGTGATGGGTATGGCCGACATAGGTCATGAAAGGGCCAATTCTCTCAGTCTCAGAACTACTGAATGTG
ATCCAAATTCATCTCGGGAATCAAACATCCTTTTCGTTGGTGGACTTCCTACAGATTGTACTAGGAGAGAAGTAGGCCATCTTTTCCGCCCCTTTATTGGCTACAAAGAT
ATCAGAGTTGTTCACAAGGAGCCCAGACGAATTGGAGATAAAGCTATGGTATTATGCTTTGTTGAGTTCGTTGAAGCAAGATATGCCCGGGCTGCAATGGAAACTCTTCA
AGGTTACAAGTTCGATGACAAAAAACCTGATTCCCCTGCTTTGAAGATTCAATTTGCACATTTTCCTTTCCGCGATGAATGTCATATCCAACACCTTCTGGAACGCCGTA
GTCTGAAGGAACTGGCAGGTTTCAGACATCTTCTGCTTGGGATCATGAAAATGACATATAGGTACAAAGATTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAAGTCCAAAAACAACACTATGCTAATAAGGCCCAAAGTAAGAATTATCCACGCCTCAAGCGTGGGAGAAGTGGAGAAGAGACGAGGCCGGGGGAGGGTTGCGG
TTGCAGCCGAAGCGGAGCAGGCGGCCAAGCCATGGGAGACGATGCTTATACCAGATACGCCGCCTCAGTAGATAGAGCAGGAAGTGCAGCGAGGTCTGGCCTTTCAACCT
ACTCTGAAGCACCTCCTTTGACATCTTATCCTAATTCGACCTCTATTGATCAGTGGCACATCCCTCCTGATTATTTGCAAAAAGATACCAATTCGTTAGGACCTGGAGCT
TATGGATATACTGACGTAGGAAACATTGGTAATTGTCCGGAACCAGTTATTGGCGGTGTGACATCCGGAGGGAGTGCAAAAGGGTACACATCTCCTTTCGAAGATTCGTT
AGCAAGTCAAAGACAAGATATTGTAGTGGGCAGTAGTCCAGGAGTGATGGGTATGGCCGACATAGGTCATGAAAGGGCCAATTCTCTCAGTCTCAGAACTACTGAATGTG
ATCCAAATTCATCTCGGGAATCAAACATCCTTTTCGTTGGTGGACTTCCTACAGATTGTACTAGGAGAGAAGTAGGCCATCTTTTCCGCCCCTTTATTGGCTACAAAGAT
ATCAGAGTTGTTCACAAGGAGCCCAGACGAATTGGAGATAAAGCTATGGTATTATGCTTTGTTGAGTTCGTTGAAGCAAGATATGCCCGGGCTGCAATGGAAACTCTTCA
AGGTTACAAGTTCGATGACAAAAAACCTGATTCCCCTGCTTTGAAGATTCAATTTGCACATTTTCCTTTCCGCGATGAATGTCATATCCAACACCTTCTGGAACGCCGTA
GTCTGAAGGAACTGGCAGGTTTCAGACATCTTCTGCTTGGGATCATGAAAATGACATATAGGTACAAAGATTCCTGA
Protein sequenceShow/hide protein sequence
MDKVQKQHYANKAQSKNYPRLKRGRSGEETRPGEGCGCSRSGAGGQAMGDDAYTRYAASVDRAGSAARSGLSTYSEAPPLTSYPNSTSIDQWHIPPDYLQKDTNSLGPGA
YGYTDVGNIGNCPEPVIGGVTSGGSAKGYTSPFEDSLASQRQDIVVGSSPGVMGMADIGHERANSLSLRTTECDPNSSRESNILFVGGLPTDCTRREVGHLFRPFIGYKD
IRVVHKEPRRIGDKAMVLCFVEFVEARYARAAMETLQGYKFDDKKPDSPALKIQFAHFPFRDECHIQHLLERRSLKELAGFRHLLLGIMKMTYRYKDS