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Clc05G20295 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G20295
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMyb_DNA-bind_3 domain-containing protein
Genome locationClcChr05:29069013..29073493
RNA-Seq ExpressionClc05G20295
SyntenyClc05G20295
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB70651.1 hypothetical protein L484_023837 [Morus notabilis]2.2e-1367.24Show/hide
Query:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHY
        +D T+D SC IGFD  E+LGAQ R E +KV+DCPIYEQ+ TIFT+S A GKYA+SSHY
Subjt:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHY

PON56685.1 Myb/SANT-like domain containing protein [Parasponia andersonii]2.2e-1362.71Show/hide
Query:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK
        +D T+D+SC +GFD  E++GAQ R E IK +DCPIYEQ+ TIFT+S A GKYA+SSHY+
Subjt:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK

PON87492.1 Myb/SANT-like domain containing protein [Trema orientale]7.6e-1464.41Show/hide
Query:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK
        +D T+D+SC +GFD  E++GAQ R E IKV+DCPIYEQ+ TIFT+S A GKYA+SSHY+
Subjt:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK

XP_024022243.1 L10-interacting MYB domain-containing protein [Morus notabilis]2.2e-1367.24Show/hide
Query:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHY
        +D T+D SC IGFD  E+LGAQ R E +KV+DCPIYEQ+ TIFT+S A GKYA+SSHY
Subjt:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHY

XP_027330350.1 L10-interacting MYB domain-containing protein-like [Abrus precatorius]1.3e-1366.1Show/hide
Query:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK
        +D  IDDSC IGFD+ E+LGAQ R E +KV+DCPIYEQ+ TIF +S A GKYA+SSHY+
Subjt:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK

TrEMBL top hitse value%identityAlignment
A0A2C9UYZ4 Uncharacterized protein8.2e-1460.66Show/hide
Query:  LESDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK
        +++D  IDDSC IGFD  E++GAQ R E +KV+DCPIYEQ+ TIFT++ A GKYA+SSH++
Subjt:  LESDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK

A0A2P5C6Q1 Myb/SANT-like domain containing protein1.1e-1362.71Show/hide
Query:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK
        +D T+D+SC +GFD  E++GAQ R E IK +DCPIYEQ+ TIFT+S A GKYA+SSHY+
Subjt:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK

A0A2P5EPQ3 Myb/SANT-like domain containing protein3.7e-1464.41Show/hide
Query:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK
        +D T+D+SC +GFD  E++GAQ R E IKV+DCPIYEQ+ TIFT+S A GKYA+SSHY+
Subjt:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK

A0A6P4AUQ2 L10-interacting MYB domain-containing protein-like isoform X21.4e-1366.1Show/hide
Query:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK
        +D TIDDSC IGFD  E++ AQ R E IKV+DCPIYEQ+ TIFT+S   GKYA+SSHY+
Subjt:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK

W9RFR5 Uncharacterized protein1.1e-1367.24Show/hide
Query:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHY
        +D T+D SC IGFD  E+LGAQ R E +KV+DCPIYEQ+ TIFT+S A GKYA+SSHY
Subjt:  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGATATGACCAAAACAAAATTTCAAAACAAGAATTTCGAGTTAGGCCATGATTGCACACATGATGTCAGCAATCATGGACATGAGGTCAATGACCATGCACA
TGACGTTAGCGATCGCATACGTAGGGACTGGAGAGCTTGGAAAGGAGCTTACCGCTCCCCGCCGTCGCGGTTCCCCTTTTCCGTTGAGGAAGCATTTGGATGTCTTGAGA
GTGACCTCACCATTGATGATTCATGTGCTATTGGGTTTGATCGGGGGGAAGAACTTGGGGCCCAGCATCGATCTGAGATAATCAAAGTCGAGGACTGTCCCATATATGAG
CAGATGTACACAATATTCACAGAATCAGATGCTGCTGGGAAGTATGCACGATCCAGCCACTACAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGATATGACCAAAACAAAATTTCAAAACAAGAATTTCGAGTTAGGCCATGATTGCACACATGATGTCAGCAATCATGGACATGAGGTCAATGACCATGCACA
TGACGTTAGCGATCGCATACGTAGGGACTGGAGAGCTTGGAAAGGAGCTTACCGCTCCCCGCCGTCGCGGTTCCCCTTTTCCGTTGAGGAAGCATTTGGATGTCTTGAGA
GTGACCTCACCATTGATGATTCATGTGCTATTGGGTTTGATCGGGGGGAAGAACTTGGGGCCCAGCATCGATCTGAGATAATCAAAGTCGAGGACTGTCCCATATATGAG
CAGATGTACACAATATTCACAGAATCAGATGCTGCTGGGAAGTATGCACGATCCAGCCACTACAAATAG
Protein sequenceShow/hide protein sequence
MDEDMTKTKFQNKNFELGHDCTHDVSNHGHEVNDHAHDVSDRIRRDWRAWKGAYRSPPSRFPFSVEEAFGCLESDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYE
QMYTIFTESDAAGKYARSSHYK