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Clc05G20310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G20310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionserine/threonine-protein phosphatase 7 long form homolog isoform X1
Genome locationClcChr05:29086639..29088204
RNA-Seq ExpressionClc05G20310
SyntenyClc05G20310
Gene Ontology termsGO:0048507 - meristem development (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646947.1 hypothetical protein Csa_020816 [Cucumis sativus]3.1e-2451.72Show/hide
Query:  RRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTD
        R   ++I+ W +R+  CA+ E   +  VS++Y SWY SITRRF+TPDGAY Y MNNFV DV   S+++N    S MC++ M N++ ++Q  RRLNVADTD
Subjt:  RRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTD

Query:  RKRIRRRRQRQRDEGV
        R+RIRRRR++Q D+ V
Subjt:  RKRIRRRRQRQRDEGV

KGN65336.2 hypothetical protein Csa_017779 [Cucumis sativus]2.2e-2250.94Show/hide
Query:  RRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTD
        R   ++I+ W +R+  CA+ E   +  VS++Y  WY SITRRF+TPDGAY YCMNNFV DV   S+++N    S MC++ M +++ ++Q  RRLNVADTD
Subjt:  RRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTD

Query:  RKRIRR
        R+RIRR
Subjt:  RKRIRR

XP_008459571.1 PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X2 [Cucumis melo]1.8e-2757.89Show/hide
Query:  QYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTDRKRI
        +YI+ W +R+  C +G   NE  VS+DY SWY SITRRFIT DGAYYY +NNFV DV  YS++HNL +L SMC+Q + N+E IIQ  +RLNVADTDR+ I
Subjt:  QYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTDRKRI

Query:  RRRRQRQRDEGVPE
        RR+R+RQ +  V +
Subjt:  RRRRQRQRDEGVPE

XP_016902435.1 PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis melo]1.8e-2757.89Show/hide
Query:  QYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTDRKRI
        +YI+ W +R+  C +G   NE  VS+DY SWY SITRRFIT DGAYYY +NNFV DV  YS++HNL +L SMC+Q + N+E IIQ  +RLNVADTDR+ I
Subjt:  QYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTDRKRI

Query:  RRRRQRQRDEGVPE
        RR+R+RQ +  V +
Subjt:  RRRRQRQRDEGVPE

XP_031742668.1 serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]3.1e-2451.72Show/hide
Query:  RRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTD
        R   ++I+ W +R+  CA+ E   +  VS++Y SWY SITRRF+TPDGAY Y MNNFV DV   S+++N    S MC++ M N++ ++Q  RRLNVADTD
Subjt:  RRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTD

Query:  RKRIRRRRQRQRDEGV
        R+RIRRRR++Q D+ V
Subjt:  RKRIRRRRQRQRDEGV

TrEMBL top hitse value%identityAlignment
A0A1S3CBQ7 serine/threonine-protein phosphatase 7 long form homolog isoform X28.5e-2857.89Show/hide
Query:  QYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTDRKRI
        +YI+ W +R+  C +G   NE  VS+DY SWY SITRRFIT DGAYYY +NNFV DV  YS++HNL +L SMC+Q + N+E IIQ  +RLNVADTDR+ I
Subjt:  QYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTDRKRI

Query:  RRRRQRQRDEGVPE
        RR+R+RQ +  V +
Subjt:  RRRRQRQRDEGVPE

A0A1S4E383 serine/threonine-protein phosphatase 7 long form homolog isoform X18.5e-2857.89Show/hide
Query:  QYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTDRKRI
        +YI+ W +R+  C +G   NE  VS+DY SWY SITRRFIT DGAYYY +NNFV DV  YS++HNL +L SMC+Q + N+E IIQ  +RLNVADTDR+ I
Subjt:  QYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTDRKRI

Query:  RRRRQRQRDEGVPE
        RR+R+RQ +  V +
Subjt:  RRRRQRQRDEGVPE

A0A5A7TPE7 Serine/threonine-protein phosphatase 7 long form-like protein isoform X11.1e-1943.9Show/hide
Query:  RRRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADT
        R+   ++I  W +R+    +    +E  VS +Y  WY SITRRFIT +GA+Y+CM +FV +V  +S++HN+  L  +C++    V+ IIQ  RRL VADT
Subjt:  RRRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADT

Query:  DRKRIRRRRQRQRDEGVPEQPDD
        DR+R+RRRR+RQ D+ V    D+
Subjt:  DRKRIRRRRQRQRDEGVPEQPDD

A0A5A7TSW1 Serine/threonine-protein phosphatase 7 long form-like protein isoform X11.5e-1943.9Show/hide
Query:  RRRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADT
        RR   ++I  W +R+    +    +E  VS +Y  WY SITRRFIT +GA+Y+CM +FV +V  +S++H++  L  +C++    V+ IIQ  RRL VADT
Subjt:  RRRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADT

Query:  DRKRIRRRRQRQRDEGVPEQPDD
        DR+R+RRRR+RQ D+ V    D+
Subjt:  DRKRIRRRRQRQRDEGVPEQPDD

A0A5A7TY99 Serine/threonine-protein phosphatase 7 long form-like protein isoform X18.6e-2043.9Show/hide
Query:  RRRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADT
        RR   ++I  W +R+    +    +E  VS +Y  WY SITRRFIT +GA+Y+CM +FV +V  +S++H++  L  +C++    V+ IIQ  RRL VADT
Subjt:  RRRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADT

Query:  DRKRIRRRRQRQRDEGVPEQPDD
        DR+R+RRRR+RQ D+ V    D+
Subjt:  DRKRIRRRRQRQRDEGVPEQPDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAATTTGTTGTTGCCTTGTCTGTTCAGTTCATTGTTGCTGAAAAGACGAGTTGGTGTGAAAGCACTGCCGGTGTCAGCCTGCATGCCTCTGCATGGGGGCATGC
ATTGACCGAACTCGTGGACGGGGTCCACGAGTTCCATGCTTTAAATTCCGACCGGCAGCCCCTTCCTCTCATTTCTACCTCCACCATCTTCATTTCTCTCTTTTCATTCT
TCATTTCTCTCCTCATATCTCTCCTTTCACTCTTCATTTCTTTCCTCCTTTCTCTCCTTTCTCTTATTTCAATTCTCGTTTGTCATTGTCGCTGTCAATTTTTCTTCTTT
TCATTCCGCCGCCGCCGCCGCCGCCAGTATATATCATTTTGGCGTGCACGTCATGGCCGCTGTGCACAAGGAGAAATAATAAACGAGTCGGATGTGTCTAATGATTATTT
GTCCTGGTACGACTCTATCACAAGAAGATTTATTACACCTGACGGTGCCTACTATTACTGCATGAATAATTTTGTCCACGATGTGCACAATTACTCCTTAAAACACAATT
TACCAGAGTTGAGTTCAATGTGTGAGCAAAACATGGTAAATGTTGAAGAAATCATTCAACATAAAAGGAGGCTCAATGTTGCTGATACTGATCGAAAACGTATTCGTCGT
AGACGACAGAGACAACGTGACGAAGGTGTTCCAGAGCAACCCGATGACCAGGAACCTCCCATATTACAACCAGACTTTGCATCCGGTTCTGGCCATCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAATTTGTTGTTGCCTTGTCTGTTCAGTTCATTGTTGCTGAAAAGACGAGTTGGTGTGAAAGCACTGCCGGTGTCAGCCTGCATGCCTCTGCATGGGGGCATGC
ATTGACCGAACTCGTGGACGGGGTCCACGAGTTCCATGCTTTAAATTCCGACCGGCAGCCCCTTCCTCTCATTTCTACCTCCACCATCTTCATTTCTCTCTTTTCATTCT
TCATTTCTCTCCTCATATCTCTCCTTTCACTCTTCATTTCTTTCCTCCTTTCTCTCCTTTCTCTTATTTCAATTCTCGTTTGTCATTGTCGCTGTCAATTTTTCTTCTTT
TCATTCCGCCGCCGCCGCCGCCGCCAGTATATATCATTTTGGCGTGCACGTCATGGCCGCTGTGCACAAGGAGAAATAATAAACGAGTCGGATGTGTCTAATGATTATTT
GTCCTGGTACGACTCTATCACAAGAAGATTTATTACACCTGACGGTGCCTACTATTACTGCATGAATAATTTTGTCCACGATGTGCACAATTACTCCTTAAAACACAATT
TACCAGAGTTGAGTTCAATGTGTGAGCAAAACATGGTAAATGTTGAAGAAATCATTCAACATAAAAGGAGGCTCAATGTTGCTGATACTGATCGAAAACGTATTCGTCGT
AGACGACAGAGACAACGTGACGAAGGTGTTCCAGAGCAACCCGATGACCAGGAACCTCCCATATTACAACCAGACTTTGCATCCGGTTCTGGCCATCAATAG
Protein sequenceShow/hide protein sequence
MLEFVVALSVQFIVAEKTSWCESTAGVSLHASAWGHALTELVDGVHEFHALNSDRQPLPLISTSTIFISLFSFFISLLISLLSLFISFLLSLLSLISILVCHCRCQFFFF
SFRRRRRRQYISFWRARHGRCAQGEIINESDVSNDYLSWYDSITRRFITPDGAYYYCMNNFVHDVHNYSLKHNLPELSSMCEQNMVNVEEIIQHKRRLNVADTDRKRIRR
RRQRQRDEGVPEQPDDQEPPILQPDFASGSGHQ