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Clc05G20400 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G20400
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSAUR-like auxin-responsive protein family
Genome locationClcChr05:29142004..29142327
RNA-Seq ExpressionClc05G20400
SyntenyClc05G20400
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608586.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]4.8e-4384.62Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGRK-QQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL
        M I+KS++MPQTAVLKQ+LKRCSSLG+K QQYDE GLP DVPKGHFVVYVG NRSRHIVPIT+LNHPQFQILLQQAADEFGFDHD GLTIPCDEH F +L
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGRK-QQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL

Query:  TSSL
        TS+L
Subjt:  TSSL

XP_004136391.1 auxin-responsive protein SAUR50 [Cucumis sativus]3.4e-4180.56Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGR-KQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL
        MAI K+++ PQTAVLK +LKRCSSLGR K  YD+ GLPFDVPKGHFVVYVG +R+RHIVPI FL+HP FQILLQQAA+EFGFDHD GLTIPCDE VFLAL
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGR-KQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL

Query:  TSSLLTQL
        TSSLLTQL
Subjt:  TSSLLTQL

XP_008466496.1 PREDICTED: auxin-induced protein 15A [Cucumis melo]3.4e-4180.56Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGR-KQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL
        MAI K+++ PQTAVLK +LKRCSSLGR K  YD+ GLPFDVPKGHFVVYVG +R+RHIVPI FL+HP FQILLQQAA+EFGFDHD GLTIPCDE VFLAL
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGR-KQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL

Query:  TSSLLTQL
        TSSLLTQL
Subjt:  TSSLLTQL

XP_022941161.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]1.7e-4385.58Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGRK-QQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL
        MAI+KS++MPQTAVLKQ+LKRCSSLG+K QQYDE GLP DVPKGHFVVYVG NRSRHIVPIT+LNHPQFQILLQQAADEFGFDHD GLTIPCDEH F +L
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGRK-QQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL

Query:  TSSL
        TS+L
Subjt:  TSSL

XP_038899566.1 auxin-responsive protein SAUR50-like [Benincasa hispida]1.4e-4585.98Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGRKQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLALT
        MAI+K+S+MPQTAVLKQ+LKRCSSLGRK QYDEAGLP DVPKGHFVVYVG +R+RHIVPI FL+HP FQILLQQAA+EFGFDHD GLTIPCDEHVF ALT
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGRKQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLALT

Query:  SSLLTQL
        SSLLTQL
Subjt:  SSLLTQL

TrEMBL top hitse value%identityAlignment
A0A0A0LH47 Uncharacterized protein1.7e-4180.56Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGR-KQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL
        MAI K+++ PQTAVLK +LKRCSSLGR K  YD+ GLPFDVPKGHFVVYVG +R+RHIVPI FL+HP FQILLQQAA+EFGFDHD GLTIPCDE VFLAL
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGR-KQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL

Query:  TSSLLTQL
        TSSLLTQL
Subjt:  TSSLLTQL

A0A1S3CRD7 auxin-induced protein 15A1.7e-4180.56Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGR-KQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL
        MAI K+++ PQTAVLK +LKRCSSLGR K  YD+ GLPFDVPKGHFVVYVG +R+RHIVPI FL+HP FQILLQQAA+EFGFDHD GLTIPCDE VFLAL
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGR-KQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL

Query:  TSSLLTQL
        TSSLLTQL
Subjt:  TSSLLTQL

A0A5A7V5B1 Auxin-induced protein 15A1.7e-4180.56Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGR-KQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL
        MAI K+++ PQTAVLK +LKRCSSLGR K  YD+ GLPFDVPKGHFVVYVG +R+RHIVPI FL+HP FQILLQQAA+EFGFDHD GLTIPCDE VFLAL
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGR-KQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL

Query:  TSSLLTQL
        TSSLLTQL
Subjt:  TSSLLTQL

A0A6J1FKC5 auxin-responsive protein SAUR50-like8.0e-4485.58Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGRK-QQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL
        MAI+KS++MPQTAVLKQ+LKRCSSLG+K QQYDE GLP DVPKGHFVVYVG NRSRHIVPIT+LNHPQFQILLQQAADEFGFDHD GLTIPCDEH F +L
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGRK-QQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL

Query:  TSSL
        TS+L
Subjt:  TSSL

A0A6J1J0M7 auxin-responsive protein SAUR50-like8.0e-4485.58Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGRK-QQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL
        MAI+KS++MPQTAVLKQ+LKRCSSLG+K QQYDE GLP DVPKGHFVVYVG NRSRHIVPIT+LNHPQFQILLQQAADEFGFDHD GLTIPCDEH F +L
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGRK-QQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL

Query:  TSSL
        TS+L
Subjt:  TSSL

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR501.7e-3570.87Show/hide
Query:  IKKSSRMPQTAVLKQILKRCSSLGRKQ--QYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLALT
        +KK+S++ QTA+LKQILKRCSSLG+K    YDE  LP DVPKGHF VYVG NRSR+IVPI+FL HP+FQ LLQ+A +EFGFDHD GLTIPCDE VF  LT
Subjt:  IKKSSRMPQTAVLKQILKRCSSLGRKQ--QYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLALT

Query:  SSL
        S +
Subjt:  SSL

P0DKL1 Auxin-responsive protein SAUR504.2e-2654.46Show/hide
Query:  IKKSSRMPQTAVLKQILKRCSSLGRKQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLALTSS
        I+KS +  Q   +K+I+K+CSS G+    D++GLP DVPKGHFVVYVG  R+R+IVPI+ L+HP FQ LLQ++ +EFGF+HD G+ IPC E  FL+  S 
Subjt:  IKKSSRMPQTAVLKQILKRCSSLGRKQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLALTSS

Query:  L
        +
Subjt:  L

P33080 Auxin-induced protein X10A1.2e-1557.58Show/hide
Query:  DVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHD-GGLTIPCDEHVFLALTSSL
        +VPKG+ VVYVG    R ++P+++LN P FQ LL QA +EFG+DH  GGLTIPC E  FL +TS L
Subjt:  DVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHD-GGLTIPCDEHVFLALTSSL

P33081 Auxin-induced protein 15A1.2e-1556.06Show/hide
Query:  DVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHD-GGLTIPCDEHVFLALTSSL
        D PKG+  VYVG    R ++P+++LN P FQ LL QA +EFG+DH  GGLTIPC E VF  +TS L
Subjt:  DVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHD-GGLTIPCDEHVFLALTSSL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 101.9e-2658.72Show/hide
Query:  MAIKKSSR--MPQTAVLKQILKRCSSLGRKQQYD------EAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCD
        MAIK+SS+    Q A +KQI+KRCSSL + +  +      E  LP DVPKGHF VYVG NRSR+IVPI++L+H +FQ LL+ A +EFGFDHD GLTIPCD
Subjt:  MAIKKSSR--MPQTAVLKQILKRCSSLGRKQQYD------EAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCD

Query:  EHVFLALTS
        E  F +L S
Subjt:  EHVFLALTS

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family4.6e-3666.36Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGRKQQ----YDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVF
        MA+KK++++ QTA++KQILKRCSSLG+KQ      DE G P +VPKGHFVVYVG NR R++VPI+FL  P+FQ+LLQQA +EFGFDHD GLTIPC+E VF
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGRKQQ----YDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVF

Query:  LALTSSL
         +LTS L
Subjt:  LALTSSL

AT2G16580.1 SAUR-like auxin-responsive protein family7.4e-3465.38Show/hide
Query:  IKKSSRMPQTAVLKQILKRCSSLGRKQ---QYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL
        +KKS+++ QTA+L+QILKRCSSLG+K     Y+E  LP DVPKGHF VYVGHNRSR+IVPI+FL +  FQ LL++A +EFGFDHD GLTIPCDE  F  L
Subjt:  IKKSSRMPQTAVLKQILKRCSSLGRKQ---QYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLAL

Query:  TSSL
        TS +
Subjt:  TSSL

AT2G21220.1 SAUR-like auxin-responsive protein family1.1e-3769.9Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGRKQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLALT
        MA+K+SS++ QTA+LKQILKRCSSL + Q YDE GLP DVPKGHF VYVG  RSR+IVPI+FL HP+F+ LLQQA +EFGF+HD GLTIPC+E VF +LT
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGRKQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLALT

Query:  SSL
        S +
Subjt:  SSL

AT4G34760.1 SAUR-like auxin-responsive protein family1.2e-3670.87Show/hide
Query:  IKKSSRMPQTAVLKQILKRCSSLGRKQ--QYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLALT
        +KK+S++ QTA+LKQILKRCSSLG+K    YDE  LP DVPKGHF VYVG NRSR+IVPI+FL HP+FQ LLQ+A +EFGFDHD GLTIPCDE VF  LT
Subjt:  IKKSSRMPQTAVLKQILKRCSSLGRKQ--QYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLALT

Query:  SSL
        S +
Subjt:  SSL

AT4G38860.1 SAUR-like auxin-responsive protein family2.6e-3973.08Show/hide
Query:  MAIKKSSRMPQTAVLKQILKRCSSLGRKQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHD-GGLTIPCDEHVFLAL
        MA+K+SS++ QTA+LKQILKRCSSLG+KQ YDE GLP DVPKGHF VYVG  R+R+IVPI+FL HP+F ILLQQA +EFGF HD GGLTIPC+E VFL+L
Subjt:  MAIKKSSRMPQTAVLKQILKRCSSLGRKQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHD-GGLTIPCDEHVFLAL

Query:  TSSL
        TS +
Subjt:  TSSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCAAAAAGTCGAGCAGAATGCCACAAACGGCGGTGCTGAAGCAGATTCTGAAGCGCTGCTCCAGCTTAGGAAGAAAGCAGCAGTACGACGAAGCAGGTCTCCC
TTTCGATGTCCCCAAAGGCCATTTCGTTGTATATGTCGGCCATAACCGAAGCAGACACATTGTTCCCATCACATTTCTCAATCATCCTCAGTTTCAAATCTTGCTCCAAC
AAGCCGCTGATGAATTTGGGTTCGATCATGACGGAGGCCTCACTATTCCTTGCGATGAACACGTCTTTCTCGCTTTAACTTCATCGCTTCTTACTCAACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCAAAAAGTCGAGCAGAATGCCACAAACGGCGGTGCTGAAGCAGATTCTGAAGCGCTGCTCCAGCTTAGGAAGAAAGCAGCAGTACGACGAAGCAGGTCTCCC
TTTCGATGTCCCCAAAGGCCATTTCGTTGTATATGTCGGCCATAACCGAAGCAGACACATTGTTCCCATCACATTTCTCAATCATCCTCAGTTTCAAATCTTGCTCCAAC
AAGCCGCTGATGAATTTGGGTTCGATCATGACGGAGGCCTCACTATTCCTTGCGATGAACACGTCTTTCTCGCTTTAACTTCATCGCTTCTTACTCAACTTTAA
Protein sequenceShow/hide protein sequence
MAIKKSSRMPQTAVLKQILKRCSSLGRKQQYDEAGLPFDVPKGHFVVYVGHNRSRHIVPITFLNHPQFQILLQQAADEFGFDHDGGLTIPCDEHVFLALTSSLLTQL