; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G20450 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G20450
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionATP synthase subunit e, mitochondrial
Genome locationClcChr05:29211137..29213997
RNA-Seq ExpressionClc05G20450
SyntenyClc05G20450
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063268.1 ATP synthase E chain [Cucumis melo var. makuwa]3.8e-2168.24Show/hide
Query:  MHVVASRKAFGLYVSMWEKGNSLALEGGDDSKHFCVATDNHRLTLMAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVN
        +HVVASRKA         KG+   +EG    K+FC+A+DNH L LMAPPPGPYSGTS+LALVARASAFTFGLVYG+IKLKVLKV+
Subjt:  MHVVASRKAFGLYVSMWEKGNSLALEGGDDSKHFCVATDNHRLTLMAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVN
KAE8651340.1 hypothetical protein Csa_002027 [Cucumis sativus]2.3e-1078.43Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLK---VNWNQLLSNR
        MAPPPGPYSGTS+LALVARASAF+FGLVYGSIKLKVLK   +  NQ LS +
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLK---VNWNQLLSNR
KAF8405347.1 hypothetical protein HHK36_010251 [Tetracentron sinense]1.8e-1081.63Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWNQLLSNRC
        MAPPPGPYSGTS+LALVARASAFTFGLVYGS+KLK LK   + LLS RC
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWNQLLSNRC
KAG8474200.1 hypothetical protein CXB51_033604 [Gossypium anomalum]1.8e-1080.43Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWNQLLS
        MAPPPGPYSGTS+LALVARASAF+FGLVYGSIKLK LK+N  +L +
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWNQLLS
TYG88711.1 hypothetical protein ES288_A12G042800v1 [Gossypium darwinii]1.8e-1080.43Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWNQLLS
        MAPPPGPYSGTS+LALVARASAF+FGLVYGSIKLK LK+N  +L +
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWNQLLS
TrEMBL top hitse value%identityAlignment
A0A314UHM5 Uncharacterized protein4.3e-1069.64Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWNQLLSNRCCYSNTFI
        MAPPPGPYSGTS+LALVARASAF+FGLVYGSIKLK LK    ++ S   C  +T I
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWNQLLSNRCCYSNTFI
A0A4Y1QSJ2 Uncharacterized protein4.3e-1089.74Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKV
        MAPPPGPYSGTS+LALVARASAFTFGLVYGS+KL+VLK+
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKV
A0A5A7V6P3 ATP synthase E chain1.8e-2168.24Show/hide
Query:  MHVVASRKAFGLYVSMWEKGNSLALEGGDDSKHFCVATDNHRLTLMAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVN
        +HVVASRKA         KG+   +EG    K+FC+A+DNH L LMAPPPGPYSGTS+LALVARASAFTFGLVYG+IKLKVLKV+
Subjt:  MHVVASRKAFGLYVSMWEKGNSLALEGGDDSKHFCVATDNHRLTLMAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVN
A0A5D2E6B5 Uncharacterized protein8.6e-1180.43Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWNQLLS
        MAPPPGPYSGTS+LALVARASAF+FGLVYGSIKLK LK+N  +L +
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWNQLLS
A0A6J5W8M8 Uncharacterized protein4.3e-1089.74Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKV
        MAPPPGPYSGTS+LALVARASAFTFGLVYGS+KL+VLK+
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01130.1 unknown protein2.9e-1176.19Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWN
        MAPPPG YSGTS+LALVARASAF  GL+YG+IKLK LK+  N
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWN
AT3G01130.2 unknown protein1.4e-1081.58Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLK
        MAPPPG YSGTS+LALVARASAF  GL+YG+IKLK LK
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLK
AT5G15320.1 unknown protein7.2e-1079.49Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKV
        M  PPG YSGTSSLALVARASAF  GLVYG++KLKVLK+
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKV
AT5G15320.2 unknown protein2.3e-0877.78Show/hide
Query:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKV
        M  PPG YSGTSSLALVARASAF  GLVYG++KLK+
Subjt:  MAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGTCGTGGCATCGCGTAAGGCTTTTGGACTCTACGTGTCAATGTGGGAAAAGGGAAACTCATTGGCACTCGAAGGAGGAGACGATTCCAAGCATTTCTGTGTTGC
GACTGATAATCATCGTTTAACTCTAATGGCACCCCCTCCTGGCCCTTACTCCGGCACCAGCTCCCTCGCTCTGGTAGCCCGTGCATCAGCATTCACCTTTGGTTTGGTTT
ACGGAAGCATTAAGCTCAAGGTTCTGAAGGTAAATTGGAATCAACTGCTGTCCAACCGTTGTTGTTATAGTAATACATTCATTGAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACGTCGTGGCATCGCGTAAGGCTTTTGGACTCTACGTGTCAATGTGGGAAAAGGGAAACTCATTGGCACTCGAAGGAGGAGACGATTCCAAGCATTTCTGTGTTGC
GACTGATAATCATCGTTTAACTCTAATGGCACCCCCTCCTGGCCCTTACTCCGGCACCAGCTCCCTCGCTCTGGTAGCCCGTGCATCAGCATTCACCTTTGGTTTGGTTT
ACGGAAGCATTAAGCTCAAGGTTCTGAAGGTAAATTGGAATCAACTGCTGTCCAACCGTTGTTGTTATAGTAATACATTCATTGAAATTTGAAATGTATTTCGTTGGACA
TGGGTTTGGTTGTATGGCGCCTCTGTTTACATTAACTCCATGTTTATTAATGGTGTGACCATTTCACTCGTTCATTCACATGAATTCAACATTAAAACTAAATTTTGACT
TGTTTTCTTTCGGAGACTAGATTTCTTCGTTGTCCAATTTTTATCTGCATTTCTAATTTAAGGAAGAAGATTTTAGGAACCAAGTATGGGCTACCTTTCCTATATTTGTT
AGAATGGGATGACCAATGTGGTACTTAAGTGGGTTGGCTCTCCCACGTCAATAGCTAGCTTTGGGGGTTTGTAGTTCTCTAAGGTGCTTAAGTACCTAAAAATGGTATCA
GAGTCGATTGTTGACATTCCAAAGTGGAACCGGCAGAGGGTTCTAACCGGGTGTGACCATGTGAAATACTGTCGGAGTAGCCGTCGGGAAGTCGGCTTTTCAGAGATGGG
GGTTAGGAACCAAGGTAGTATGGACTATCTTTGTCCATTGGTTAGCATGGGATGACCAATGTGGTACTTAAGTGGCTTGGCTCTCTCACCTCAATAGCTAACTTGGGTGT
GGTTCTCTAAGGTACTTAAGTCCCTAATAGAAGTCTTGTTGGAAACTTAAACGTTCACATTTTGTGCCTCTTTATTGTCTCAAGCACCGACATACTAATAATAATAAGAG
AAAATTGTTTATATCTATTCAGTGGCATTTAGATGAGACATTTTTACTGATAAGAGAGTTTCTTCAGGTTACGTCGACTTCCATGCAATGTTATTTGTCTTTCAGATTAA
ATATGTGAAAAATCACAGAAAGCACATGAAACATAGACCGCCTCGTGTATCTTGATCAGTGAATTGTATAGAATATGAATCTAGAATATGAATCTGGTTGTGTAATAACG
TATCTTTTGGTTGTATTTTTCTGCACTTGCCAGGTAAAGGCCAAGTCACATGCGAAAGCTGAAGCCAAGGCCCATCATTGATGAACACATTTACTGATGTAGCTTGTAGC
GATGGAAGAGATGGTAATTACCGC
Protein sequenceShow/hide protein sequence
MHVVASRKAFGLYVSMWEKGNSLALEGGDDSKHFCVATDNHRLTLMAPPPGPYSGTSSLALVARASAFTFGLVYGSIKLKVLKVNWNQLLSNRCCYSNTFIEI