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Clc05G20650 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G20650
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionThioredoxin
Genome locationClcChr05:29353911..29355182
RNA-Seq ExpressionClc05G20650
SyntenyClc05G20650
Gene Ontology termsGO:0006662 - glycerol ether metabolic process (biological process)
GO:0015035 - protein disulfide oxidoreductase activity (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591291.1 hypothetical protein SDJN03_13637, partial [Cucurbita argyrosperma subsp. sororia]5.3e-5292.86Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAE   VITCHTVGSWKQQLLKGKQS+KLIVVDFTAAWCGPCRAIAPVF ELAKKMSNVIFLKVDVDKL TVAAEWGVSALPCFMFLKNGKVV RFVGAR
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQHA
        KDALQK+VLQHA
Subjt:  KDALQKLVLQHA

KAG6608561.1 Thioredoxin H1, partial [Cucurbita argyrosperma subsp. sororia]6.2e-5358.45Show/hide
Query:  LYLVCPNALPSSTVCRKIVQILEDDKVEALQAFPNGSISYAPQMGLSNCSFISLPSTTPTINEAIQYFNFLVQRRSYRRRNSKSQLSLLLHLRSNMAERG
        LYL+C NALPSS+V RK VQILED+K E                                                                 S MA +G
Subjt:  LYLVCPNALPSSTVCRKIVQILEDDKVEALQAFPNGSISYAPQMGLSNCSFISLPSTTPTINEAIQYFNFLVQRRSYRRRNSKSQLSLLLHLRSNMAERG

Query:  EVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARKDALQ
        EVI C TVGSWKQQLLKGKQS+KLIVVDFTAAWCGPCRA+APVF ELAKKMSNVIFLKVDVD+L  VAAEWGVSALPCFMFLKNGKVVDRFVGARKD LQ
Subjt:  EVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARKDALQ

Query:  KLVLQHA
        K+VLQ+A
Subjt:  KLVLQHA

XP_008466520.1 PREDICTED: thioredoxin H-type-like [Cucumis melo]1.8e-5292.86Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAE+ +VITCHTV SWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELA+KMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNG VVDRFVGAR
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQHA
        KDAL+KLVL HA
Subjt:  KDALQKLVLQHA

XP_022975984.1 thioredoxin H-type-like [Cucurbita maxima]4.4e-5191.07Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAE   VITCHTVGSWKQQLLKGKQS+KLIVVDFTAAWCGPCRAIAP F ELAKKMSNVIFLKVDVDKL TVAAEWGV ALPCFMFLKNGKVV RFVGAR
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQHA
        KDALQK+VLQHA
Subjt:  KDALQKLVLQHA

XP_038898480.1 thioredoxin H1-like [Benincasa hispida]4.8e-5392.86Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        M ++ EVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVF ELA+KMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVV+RFVGAR
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQHA
        KDAL+KLVLQHA
Subjt:  KDALQKLVLQHA

TrEMBL top hitse value%identityAlignment
A0A0A0LGF7 Thioredoxin4.8e-5190.18Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAE+ +VI CHTV SWKQQLLKGKQ DKLIVVDFTAAWCGPCRAIAPVFVELA+KMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGK+VDRFVGAR
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQHA
        KDAL+KLV  HA
Subjt:  KDALQKLVLQHA

A0A1S3CSR4 Thioredoxin8.7e-5392.86Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAE+ +VITCHTV SWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELA+KMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNG VVDRFVGAR
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQHA
        KDAL+KLVL HA
Subjt:  KDALQKLVLQHA

A0A5A7V9W3 Thioredoxin8.7e-5392.86Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAE+ +VITCHTV SWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELA+KMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNG VVDRFVGAR
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQHA
        KDAL+KLVL HA
Subjt:  KDALQKLVLQHA

A0A6J1IM69 thioredoxin H-type-like2.2e-5191.07Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAE   VITCHTVGSWKQQLLKGKQS+KLIVVDFTAAWCGPCRAIAP F ELAKKMSNVIFLKVDVDKL TVAAEWGV ALPCFMFLKNGKVV RFVGAR
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQHA
        KDALQK+VLQHA
Subjt:  KDALQKLVLQHA

A0A6J1IZB4 thioredoxin H1-like4.8e-5189.29Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MA +GEVI CHTVGSWKQQLLKGKQS+KLIVVDFTAAWCGPCRA+APVF ELAKK+SNVIFLKVDVD+L  VAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQHA
        KD LQK+VLQHA
Subjt:  KDALQKLVLQHA

SwissProt top hitse value%identityAlignment
P29448 Thioredoxin H14.2e-3658.18Show/hide
Query:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARK
        +E G+VI CHTV +W +QL K  +S  L+VVDFTA+WCGPCR IAP F +LAKK+ NV+FLKVD D+L +VA++W + A+P FMFLK GK++D+ VGA+K
Subjt:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARK

Query:  DALQKLVLQH
        D LQ  + +H
Subjt:  DALQKLVLQH

P29449 Thioredoxin H-type 14.6e-3557.66Show/hide
Query:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARK
        +E G+V  CH V  W +   KG ++ KL+VVDFTA+WCGPCR IAP+  ++AKKM +VIFLKVDVD+L TV+AEW V A+P F+F+K+GK VDR VGA+K
Subjt:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARK

Query:  DALQKLVLQHA
        + LQ+ +++HA
Subjt:  DALQKLVLQHA

Q07090 Thioredoxin H-type 21.4e-3460.36Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAE G+VI  HTV +W + L KG    KLIVVDFTA+WCGPC+ IA  + ELAKKM  V FLKVDVD+L +VA +W V A+P FMFLK GK+VD+ VGA+
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQH
        KD LQ+ + +H
Subjt:  KDALQKLVLQH

Q39239 Thioredoxin H44.8e-3259.46Show/hide
Query:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKK-MSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        AE G+VI CHT   W  QL K K+S+KLIV+DFTA+WC PCR IAP+F +LAKK MS+ IF KVDVD+L +VA E+GV A+P F+F+K G+VVD+ VGA 
Subjt:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKK-MSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQH
        K+ LQ  +++H
Subjt:  KDALQKLVLQH

Q43636 Thioredoxin H-type1.9e-3662.73Show/hide
Query:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARK
        AE G+VI CHTV +W +QL KG  +  LIVVDFTA+WCGPCR IAP   ELAKK+ NV FLKVDVD+L TVA EW V ++P FMFLK GK++D+ VGA+K
Subjt:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARK

Query:  DALQKLVLQH
        D LQ+ + +H
Subjt:  DALQKLVLQH

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein3.4e-3359.46Show/hide
Query:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKK-MSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        AE G+VI CHT   W  QL K K+S+KLIV+DFTA+WC PCR IAP+F +LAKK MS+ IF KVDVD+L +VA E+GV A+P F+F+K G+VVD+ VGA 
Subjt:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKK-MSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQH
        K+ LQ  +++H
Subjt:  KDALQKLVLQH

AT1G45145.1 thioredoxin H-type 55.8e-3353.15Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MA  GEVI CHT+  W +++    +S KLIV+DFTA+WC PCR IAPVF E+AKK +NV+F K+DVD+L  VA E+ V A+P F+F+K G ++DR VGA 
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDALQKLVLQH
        KD + + +++H
Subjt:  KDALQKLVLQH

AT3G17880.1 tetraticopeptide domain-containing thioredoxin2.6e-2537.24Show/hide
Query:  RRSYRRRNSKSQLSLLLHLRSNMAER-----------GEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVD
        RR Y+R   + +L      R    E            GEVI+ H+    + +    K++ +L+++ FTA WCGPCR ++P++  LA + S V+FLKVD+D
Subjt:  RRSYRRRNSKSQLSLLLHLRSNMAER-----------GEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVD

Query:  KLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARKDALQKLVLQHA
        K   VAA W +S++P F F+++GK VD+ VGA K +L++ + QH+
Subjt:  KLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARKDALQKLVLQHA

AT3G51030.1 thioredoxin H-type 13.0e-3758.18Show/hide
Query:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARK
        +E G+VI CHTV +W +QL K  +S  L+VVDFTA+WCGPCR IAP F +LAKK+ NV+FLKVD D+L +VA++W + A+P FMFLK GK++D+ VGA+K
Subjt:  AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARK

Query:  DALQKLVLQH
        D LQ  + +H
Subjt:  DALQKLVLQH

AT5G42980.1 thioredoxin 36.0e-3055.77Show/hide
Query:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MA  GEVI CHTV  W ++L    +S KLIV+DFTA WC PCR IAPVF +LAKK  +V+F KVDVD+L TVA E+ V A+P F+F+K G++ +  VGA 
Subjt:  MAERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDAL
        K+ +
Subjt:  KDAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCACCAAGATGGAAACACTTACCTAGTTGCGTACCGCTTGTATTTGGTCTGTCCTAACGCACTTCCATCGTCAACCGTTTGCCGAAAAATTGTTCAGATTCTTGA
AGATGACAAAGTGGAAGCTCTCCAAGCTTTTCCGAATGGTTCGATTTCATATGCACCGCAAATGGGGCTTTCCAATTGCTCGTTCATTTCCTTGCCTTCTACTACTCCTA
CTATAAATGAAGCCATTCAGTACTTCAATTTCCTCGTTCAACGACGATCTTACAGGAGAAGAAATTCCAAATCACAACTCTCTTTGCTTTTGCATTTAAGATCGAATATG
GCAGAAAGGGGCGAAGTGATTACATGCCATACCGTTGGATCATGGAAGCAGCAGCTCCTCAAAGGAAAACAATCCGATAAACTGATTGTTGTGGACTTCACTGCCGCATG
GTGCGGTCCGTGCCGTGCCATCGCTCCAGTTTTTGTAGAGTTGGCTAAGAAGATGAGTAATGTCATATTCTTGAAGGTCGATGTTGATAAATTGACTACAGTTGCTGCGG
AATGGGGAGTTAGTGCTCTCCCTTGTTTCATGTTCTTGAAGAATGGGAAGGTGGTGGACAGGTTTGTAGGAGCAAGAAAAGATGCATTGCAGAAGCTTGTATTACAACAT
GCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCACCAAGATGGAAACACTTACCTAGTTGCGTACCGCTTGTATTTGGTCTGTCCTAACGCACTTCCATCGTCAACCGTTTGCCGAAAAATTGTTCAGATTCTTGA
AGATGACAAAGTGGAAGCTCTCCAAGCTTTTCCGAATGGTTCGATTTCATATGCACCGCAAATGGGGCTTTCCAATTGCTCGTTCATTTCCTTGCCTTCTACTACTCCTA
CTATAAATGAAGCCATTCAGTACTTCAATTTCCTCGTTCAACGACGATCTTACAGGAGAAGAAATTCCAAATCACAACTCTCTTTGCTTTTGCATTTAAGATCGAATATG
GCAGAAAGGGGCGAAGTGATTACATGCCATACCGTTGGATCATGGAAGCAGCAGCTCCTCAAAGGAAAACAATCCGATAAACTGATTGTTGTGGACTTCACTGCCGCATG
GTGCGGTCCGTGCCGTGCCATCGCTCCAGTTTTTGTAGAGTTGGCTAAGAAGATGAGTAATGTCATATTCTTGAAGGTCGATGTTGATAAATTGACTACAGTTGCTGCGG
AATGGGGAGTTAGTGCTCTCCCTTGTTTCATGTTCTTGAAGAATGGGAAGGTGGTGGACAGGTTTGTAGGAGCAAGAAAAGATGCATTGCAGAAGCTTGTATTACAACAT
GCCTAATTTGAGGAGATACCAATACTCTCATATGTTTTTTTGGATTTCTATTAGAACCAGAAAAAGGTTTATGCAACTTTTGTGATGCTTTTAGTTAGAACAACATTGAT
TTTGCTTGTTTTGTTTGGATTGTTTTTCAATCATTTTTACTATTTCGAGGTTATCAGACTTGTTATGTAATGAATGAGCATCTATTCTTTTGTTGAATAAAAATGAGCGC
CTATTTAAAGTGTCTTGAGGTTC
Protein sequenceShow/hide protein sequence
MVHQDGNTYLVAYRLYLVCPNALPSSTVCRKIVQILEDDKVEALQAFPNGSISYAPQMGLSNCSFISLPSTTPTINEAIQYFNFLVQRRSYRRRNSKSQLSLLLHLRSNM
AERGEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAKKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVDRFVGARKDALQKLVLQH
A