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Clc05G20760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G20760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description50S ribosomal protein L31
Genome locationClcChr05:29486710..29488016
RNA-Seq ExpressionClc05G20760
SyntenyClc05G20760
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002150 - Ribosomal protein L31
IPR034704 - L28p-like
IPR042105 - Ribosomal protein L31 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041569.1 50S ribosomal protein L31 [Cucumis melo var. makuwa]3.0e-6695.52Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK+KE  ARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK
        RKKFGELSQLMEIPVLKGEIILP+KRK+ KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK

XP_004147854.2 50S ribosomal protein L31, chloroplastic [Cucumis sativus]1.9e-6594.78Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK KE  ARS+RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK
        RKKFGELSQLMEIPVLKGEIILP+KRK+ KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK

XP_008466538.1 PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo]3.0e-6695.52Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK+KE  ARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK
        RKKFGELSQLMEIPVLKGEIILP+KRK+ KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK

XP_022975559.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita maxima]2.6e-6293.33Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSF  LQRPISP VAPPK KEF ARSHR VVTCRKKDLHPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPTKRKA-GKGKKK
        RKKFGELSQLMEIPVLKGEIILPTKRK+ GKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPTKRKA-GKGKKK

XP_038896266.1 50S ribosomal protein L31, chloroplastic [Benincasa hispida]5.6e-6593.28Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRP S AVAPPKNKE  AR+HRPVVTCRKKDLHPQFYED+KVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK
        RKKFGELSQLMEIPVLKGEI+LPTK+K+GKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LDC9 50S ribosomal protein L319.3e-6694.78Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK KE  ARS+RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK
        RKKFGELSQLMEIPVLKGEIILP+KRK+ KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK

A0A1S3CRJ2 50S ribosomal protein L31, chloroplastic1.4e-6695.52Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK+KE  ARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK
        RKKFGELSQLMEIPVLKGEIILP+KRK+ KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK

A0A5A7TJN6 50S ribosomal protein L31, chloroplastic1.4e-6695.52Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK+KE  ARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK
        RKKFGELSQLMEIPVLKGEIILP+KRK+ KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK

A0A6J1IKY2 50S ribosomal protein L311.3e-6293.33Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSF  LQRPISP VAPPK KEF ARSHR VVTCRKKDLHPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPTKRKA-GKGKKK
        RKKFGELSQLMEIPVLKGEIILPTKRK+ GKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPTKRKA-GKGKKK

E5GCI4 50S ribosomal protein L31, chloroplastic1.4e-6695.52Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK+KE  ARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK
        RKKFGELSQLMEIPVLKGEIILP+KRK+ KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK

SwissProt top hitse value%identityAlignment
P82249 50S ribosomal protein L31, chloroplastic1.3e-4366.42Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        M L L+N FL         +  PK     + + RP  +CRK D+HP+F EDAKVYCNGELVMTTGGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK
        RKK+GEL+Q+MEIPVLKGEIILP K+K+ K KKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK

Q110D6 50S ribosomal protein L312.0e-1747.87Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGELSQLMEIPVLKGEIILPTKRKAGKGKK
        K D+HP++Y +AKVYCNGE+VMT G TQ E  VDVWSGNHP++ G++   ++D + +VE+F +K+ +     E    K      TK K GKGKK
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGELSQLMEIPVLKGEIILPTKRKAGKGKK

Q31L35 50S ribosomal protein L313.5e-1758.82Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL
        K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+F +K+G L
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL

Q7V9Y9 50S ribosomal protein L313.5e-1758.46Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG
        KKD+HP +Y DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  L  +  +V++F +K+G
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG

Q9FWS4 50S ribosomal protein L31, chloroplastic9.3e-4765.97Show/hide
Query:  MALNLTNSF---------LQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL
        MA++L NSF         LQL++P+  AV   K    R+ +    +TCRKK+LHP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+
Subjt:  MALNLTNSF---------LQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL

Query:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKAG-KGKKK
        VDADQVEKFRK+F  LS++MEIPVLKGEII+PTK+  G KGKKK
Subjt:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKAG-KGKKK

Arabidopsis top hitse value%identityAlignment
AT1G75350.1 Ribosomal protein L316.6e-4865.97Show/hide
Query:  MALNLTNSF---------LQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL
        MA++L NSF         LQL++P+  AV   K    R+ +    +TCRKK+LHP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+
Subjt:  MALNLTNSF---------LQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL

Query:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKAG-KGKKK
        VDADQVEKFRK+F  LS++MEIPVLKGEII+PTK+  G KGKKK
Subjt:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKAG-KGKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCCCGGCCGTCGCACCGCCGAAGAACAAGGAATTTAGAGCGAGAAGTCACCGACCGGTTGT
AACCTGCCGGAAAAAGGATCTCCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAACTGGTGATGACGACCGGTGGGACCCAGAAAGAGTATTCAGTGG
ATGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGATCCGCCTTGCTCGTCGACGCCGACCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTG
ATGGAGATTCCTGTCCTTAAGGGGGAAATCATTCTGCCCACAAAGCGCAAAGCCGGCAAAGGGAAGAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATCAATATACTTGTGGACCCGAGAAGCAGGCCTCCACCAGGAAGGCCCATTTGGCCCAAAGTTCATAGCTAAGGCCCAACATTTACGGGCCCAAAAAATGGAGTGAGTGA
GTGGACACTCGACAAGGCCTTGAAGAAGATCACATCTCCCTCTTATCCTTTACTCACCGCAACCAAACGCAGCAATGGCGCTGAACCTAACAAATTCCTTCCTTCAACTT
CAACGGCCAATTTCCCCGGCCGTCGCACCGCCGAAGAACAAGGAATTTAGAGCGAGAAGTCACCGACCGGTTGTAACCTGCCGGAAAAAGGATCTCCACCCCCAATTTTA
CGAGGATGCTAAGGTTTATTGCAACGGAGAACTGGTGATGACGACCGGTGGGACCCAGAAAGAGTATTCAGTGGATGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCA
GCCGATCCGCCTTGCTCGTCGACGCCGACCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTCCTTAAGGGGGAAATCATTCTG
CCCACAAAGCGCAAAGCCGGCAAAGGGAAGAAGAAGTAGTAGAGTGTGAGGATTTGAATTGGCTTGGTAATCAGTTAAAATCCAAATGCATATTGAGATTTTTGGTCCTT
TCTATTGCATTATATATCTGTGTAATTTAGCAGAATCGATACTAATTTGTCTGAACCAAACAATTTGTTTCTGTTAGTTGTATTGCCTTGCTAATTCTGAATGCTCAAAA
TGTTTTATGGGTATGAATGCACAATGGGATAGGTGTTTGGTGGGTGAGAAAATTCATGAAGGAAAAGAAAATTTGAGAAATTAGAATAGGAATTTGATGGTGATGGCAAC
TGACGATGCAAATTCTTCAAGCTTTTGGGCAGTTTATTTGTGCAGGTGAATTGCTTGTTTTCATAATTTGCTTCTATGAATCTTTAGCTTATGAGACGGTGGTGTAGGAA
ACTTGCCTTCGGACTTCAGAGGATTTCCTTGTTTTAAAATTGGTTGAAATTTGAAATATCATAAACTGACATGAAAAGAAGATGATGGCCACAACATAAGGAAGGTAGCC
AAAGCATTTGATACTTAGTGGGAGTAATGATTTAATTCATGTAATTTCGATTTTGTAATAATGTAGGTAGTGAACATTTCGTATTTTGTTTTTTATTTTTGAAAAATAAT
TATTTTTTATT
Protein sequenceShow/hide protein sequence
MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQL
MEIPVLKGEIILPTKRKAGKGKKK