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Clc05G20850 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G20850
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionjacalin-related lectin 3-like
Genome locationClcChr05:29565522..29566131
RNA-Seq ExpressionClc05G20850
SyntenyClc05G20850
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:0035556 - intracellular signal transduction (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001229 - Jacalin-like lectin domain
IPR033734 - Jacalin-like lectin domain, plant
IPR036404 - Jacalin-like lectin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022936285.1 jacalin-related lectin 4-like [Cucurbita moschata]2.9e-5189.09Show/hide
Query:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA
        MEYE+ENGELVWSE+HGG+GGS+S+VVLDFPDE LVTIHGYYDD+ YWG D TVIRSLTLETNKR+YGPFGVENGTKFSFPTVGVKIVG+HGRSGLYLDA
Subjt:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA

Query:  IGLLALSIQD
        IGLLALSIQD
Subjt:  IGLLALSIQD

XP_022975798.1 jacalin-related lectin 3-like [Cucurbita maxima]8.4e-5188.18Show/hide
Query:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA
        ME+E+ENGELVWSE+HGG+GGS+S+VVLDFPDE LVTIHGYYDD+ YWG D TVIRSLTLETNKR+YGPFGVENGTKFSFPTVGVKIVG+HGRSGLYLDA
Subjt:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA

Query:  IGLLALSIQD
        IGLLALSIQD
Subjt:  IGLLALSIQD

XP_023536123.1 jacalin-related lectin 4-like [Cucurbita pepo subsp. pepo]8.4e-5188.18Show/hide
Query:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA
        ME+E+ENGELVWSE+HGG+GGS+S+VVLDFPDE LVTIHGYYDD+ YWG D TVIRSLTLETNKR+YGPFGVENGTKFSFPTVGVKIVG+HGRSGLYLDA
Subjt:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA

Query:  IGLLALSIQD
        IGLLALSIQD
Subjt:  IGLLALSIQD

XP_038898646.1 mannose/glucose-specific lectin-like [Benincasa hispida]8.1e-5493.64Show/hide
Query:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA
        MEYE+ENGELVWSE+HGGNGGSQSKVVLDFPDEH VTIHGYYDDIY WGFDGTVIRSLT+ETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSG+YLDA
Subjt:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA

Query:  IGLLALSIQD
        IGLLALSIQ+
Subjt:  IGLLALSIQD

XP_038898650.1 jacalin-related lectin 3-like [Benincasa hispida]1.5e-5291.82Show/hide
Query:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA
        MEYE+ENGELVWSE+HGGNGGSQS+VVLDFPDEHLVTIHGYYDDI+ WGFDGTVIRSLTLETNKRSY PFGVENGTKFSFPTVGVK+VGIHGRSG+YLDA
Subjt:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA

Query:  IGLLALSIQD
        IGLLALS QD
Subjt:  IGLLALSIQD

TrEMBL top hitse value%identityAlignment
A0A1S3CRN3 agglutinin-like2.9e-4983.64Show/hide
Query:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA
        MEYE+ENGE+VWSE+HGGNGGS+S+VVLDFPDEHLVTIHGYYD++ YWGFDGTVIRSLT+ TN R+YGPFGVENGTKFSFP  GVK+VGIHGRSGLYLDA
Subjt:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA

Query:  IGLLALSIQD
        IG LAL +QD
Subjt:  IGLLALSIQD

A0A5A7TIW6 Agglutinin-like1.5e-5085.45Show/hide
Query:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA
        MEYE+ENGE+VWSE+HGGNGGS+S+VVLDFPDEHLVTIHGYYD++ YWGFDGTVIRSLT+ETN R+YGPFGVENGTKFSFP  GVK+VGIHGRSGLYLDA
Subjt:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA

Query:  IGLLALSIQD
        IGLLAL +QD
Subjt:  IGLLALSIQD

A0A6J1C6X3 jacalin-related lectin 3-like4.7e-4780Show/hide
Query:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA
        MEYE+EN ELVWSE+HGGNGGS S+VVLDFPDEH+VTIHGYYDD++YWG++ TVIRSLT+ETNKR+YGPFGVE+GTKFSFP+VG+K+VGIHGRSG+YLDA
Subjt:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA

Query:  IGLLALSIQD
        IGL A+ I+D
Subjt:  IGLLALSIQD

A0A6J1FD77 jacalin-related lectin 4-like1.4e-5189.09Show/hide
Query:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA
        MEYE+ENGELVWSE+HGG+GGS+S+VVLDFPDE LVTIHGYYDD+ YWG D TVIRSLTLETNKR+YGPFGVENGTKFSFPTVGVKIVG+HGRSGLYLDA
Subjt:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA

Query:  IGLLALSIQD
        IGLLALSIQD
Subjt:  IGLLALSIQD

A0A6J1IKB1 jacalin-related lectin 3-like4.1e-5188.18Show/hide
Query:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA
        ME+E+ENGELVWSE+HGG+GGS+S+VVLDFPDE LVTIHGYYDD+ YWG D TVIRSLTLETNKR+YGPFGVENGTKFSFPTVGVKIVG+HGRSGLYLDA
Subjt:  MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDA

Query:  IGLLALSIQD
        IGLLALSIQD
Subjt:  IGLLALSIQD

SwissProt top hitse value%identityAlignment
F4HQX1 Jacalin-related lectin 31.6e-2350Show/hide
Query:  MEYENENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD
        +EY+ +NG  VWSE+ GG GG +  KV  D+P E+L++++G Y     WG     +RSLT E+N+R YGPFGV++GT F+ P  G KI+G HG++G YLD
Subjt:  MEYENENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD

Query:  AIGL
        AIG+
Subjt:  AIGL

O04313 PYK10-binding protein 21.2e-1241Show/hide
Query:  NENGELVWSERHGGNG-GSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL
        +++ E V  E HG +      + VLD+P E+++ + G YD I+  G DG+VI  L  +TNK++  PFG+E GT F     G KIVG HGR+   L  IG+
Subjt:  NENGELVWSERHGGNG-GSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL

P82859 Agglutinin2.2e-1440.38Show/hide
Query:  MEYENENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD
        + Y++++GE + S +HGG GG     + L+   E L+ I G+Y  +   G     +RS+T  TNK  YGP+G E G  F+      ++VG HGRSG YLD
Subjt:  MEYENENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD

Query:  AIGL
        AIG+
Subjt:  AIGL

Q9SAV1 Myrosinase-binding protein 27.2e-1337.74Show/hide
Query:  NENGELVWSERHGGNG--GSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG
        N+  + +  +RHG     G+++   LD+P E++ ++ GYYD I+  G +  V+ SLT +TNKR+  PFG+  G  F     G KIVG HG++G  +  IG
Subjt:  NENGELVWSERHGGNG--GSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG

Query:  LLALSI
        + A+ I
Subjt:  LLALSI

Q9SSM3 Jacalin-related lectin 195.2e-1948.48Show/hide
Query:  NENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG
        ++NG+   SE+HGG GG++ S++ L +P+E+L  + GYY  +   G    VIRS+T ++NK+ YGP+GVE GT F+F   G +IVG++GRSG YLD+IG
Subjt:  NENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG

Arabidopsis top hitse value%identityAlignment
AT1G19715.1 Mannose-binding lectin superfamily protein1.1e-2450Show/hide
Query:  MEYENENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD
        +EY+ +NG  VWSE+ GG GG +  KV  D+P E+L++++G Y     WG     +RSLT E+N+R YGPFGV++GT F+ P  G KI+G HG++G YLD
Subjt:  MEYENENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD

Query:  AIGL
        AIG+
Subjt:  AIGL

AT1G19715.2 Mannose-binding lectin superfamily protein1.1e-2450Show/hide
Query:  MEYENENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD
        +EY+ +NG  VWSE+ GG GG +  KV  D+P E+L++++G Y     WG     +RSLT E+N+R YGPFGV++GT F+ P  G KI+G HG++G YLD
Subjt:  MEYENENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD

Query:  AIGL
        AIG+
Subjt:  AIGL

AT1G19715.3 Mannose-binding lectin superfamily protein1.1e-2450Show/hide
Query:  MEYENENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD
        +EY+ +NG  VWSE+ GG GG +  KV  D+P E+L++++G Y     WG     +RSLT E+N+R YGPFGV++GT F+ P  G KI+G HG++G YLD
Subjt:  MEYENENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD

Query:  AIGL
        AIG+
Subjt:  AIGL

AT1G52030.2 myrosinase-binding protein 25.1e-1437.74Show/hide
Query:  NENGELVWSERHGGNG--GSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG
        N+  + +  +RHG     G+++   LD+P E++ ++ GYYD I+  G +  V+ SLT +TNKR+  PFG+  G  F     G KIVG HG++G  +  IG
Subjt:  NENGELVWSERHGGNG--GSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG

Query:  LLALSI
        + A+ I
Subjt:  LLALSI

AT1G73040.1 Mannose-binding lectin superfamily protein3.7e-2048.48Show/hide
Query:  NENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG
        ++NG+   SE+HGG GG++ S++ L +P+E+L  + GYY  +   G    VIRS+T ++NK+ YGP+GVE GT F+F   G +IVG++GRSG YLD+IG
Subjt:  NENGELVWSERHGGNGGSQ-SKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATGAAAATGAAAATGGGGAGTTGGTGTGGTCTGAGAGGCATGGTGGAAATGGAGGTTCCCAATCAAAGGTTGTTCTAGATTTCCCAGATGAGCATCTTGTTAC
GATTCATGGCTACTATGATGATATATATTATTGGGGATTTGATGGCACTGTGATTCGATCGTTGACTCTGGAAACAAACAAAAGAAGTTATGGGCCGTTTGGGGTTGAAA
ATGGAACCAAGTTTTCATTCCCAACTGTTGGGGTGAAGATCGTTGGCATCCATGGCAGATCTGGTCTCTATCTCGATGCCATTGGACTTCTTGCACTTTCAATTCAAGAC
TAG
mRNA sequenceShow/hide mRNA sequence
TTTTAGGACAATTAGACAATTGGTGATTAATCATGGACAGTGGATCGACTCCATTCAAATGGAATATGAAAATGAAAATGGGGAGTTGGTGTGGTCTGAGAGGCATGGTG
GAAATGGAGGTTCCCAATCAAAGGTTGTTCTAGATTTCCCAGATGAGCATCTTGTTACGATTCATGGCTACTATGATGATATATATTATTGGGGATTTGATGGCACTGTG
ATTCGATCGTTGACTCTGGAAACAAACAAAAGAAGTTATGGGCCGTTTGGGGTTGAAAATGGAACCAAGTTTTCATTCCCAACTGTTGGGGTGAAGATCGTTGGCATCCA
TGGCAGATCTGGTCTCTATCTCGATGCCATTGGACTTCTTGCACTTTCAATTCAAGACTAGTCCTACACTCATTCTATTGGCAGCCATTAGCATTTTGTTTTTGTATTTT
GTATTTTCCCAAACACAGTATGTTTATGTAGTCAATAACTCCATTT
Protein sequenceShow/hide protein sequence
MEYENENGELVWSERHGGNGGSQSKVVLDFPDEHLVTIHGYYDDIYYWGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD