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Clc05G20860 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G20860
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionjacalin-related lectin 3-like
Genome locationClcChr05:29566139..29566836
RNA-Seq ExpressionClc05G20860
SyntenyClc05G20860
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030246 - carbohydrate binding (molecular function)
InterPro domainsIPR001229 - Jacalin-like lectin domain
IPR033734 - Jacalin-like lectin domain, plant
IPR036404 - Jacalin-like lectin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591308.1 hypothetical protein SDJN03_13654, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5675.34Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK
        ++LVI HG WIDSIQMEYED+N  L+WS++HGG+GG +SE+ LE DEHLVLV+GYYSD+ KWGIAATVIRSLTLKTNKR YGPFGIEDGTKFSFP TGLK
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK

Query:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGGNP
        +VG HGRS   LDAIGLSV T  TQI G+G EKFS G+ GGEGG P
Subjt:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGGNP

KAG7024193.1 hypothetical protein SDJN02_13007, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5675.34Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK
        ++LVI HG WIDSIQMEYED+N  L+WS++HGG+GG +SE+ LE DEHLVLV+GYYSD+ KWGIAATVIRSLTLKTNKR YGPFGIEDGTKFSFP TGLK
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK

Query:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGGNP
        +VG HGRS   LDAIGLSV T  TQI G+G EKFS G+ GGEGG P
Subjt:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGGNP

XP_022936285.1 jacalin-related lectin 4-like [Cucurbita moschata]1.1e-5675.34Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK
        ++LVI HG WIDSIQMEYED+N  L+WS++HGG+GG +SE+ LE DEHLVLV+GYYSD+ KWGIAATVIRSLTLKTNKR YGPFGIEDGTKFSFP TGLK
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK

Query:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGGNP
        +VG HGRS   LDAIGLSV T  TQI G+G EKFS G+ GGEGG P
Subjt:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGGNP

XP_023536123.1 jacalin-related lectin 4-like [Cucurbita pepo subsp. pepo]1.9e-5674.66Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK
        ++LVI HG WIDSIQMEYED+N +L+WSK+HGG+GG +SE+ LE DEHLVLV+GYYSD+ KWGIAATVIRS TLKTNKR YGPFGIEDGTKFSFP TGLK
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK

Query:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGGNP
        +VG HGRS   LDAIG+SV T  TQI G+G EKFS G+ GGEGG P
Subjt:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGGNP

XP_038898646.1 mannose/glucose-specific lectin-like [Benincasa hispida]2.2e-6381.25Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK
        +QLVINHG WIDSIQMEYED+NGELVWS+RHGG GGSQSE+ +E DEHLVLV GYYSDI +WGI+ATVIRSLTL+TNKR YGPFGIEDGTKFSFP TG K
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK

Query:  VVGFHGRSGLYLDAIGLSVQTTQINGIGPEKFSFGKYGGEGGNP
        +VGFHGRSGLYLDAIGLS+ TTQING+ PEKFS  + GGEGG+P
Subjt:  VVGFHGRSGLYLDAIGLSVQTTQINGIGPEKFSFGKYGGEGGNP

TrEMBL top hitse value%identityAlignment
A0A1S3CRN3 agglutinin-like9.1e-5267.81Show/hide
Query:  KQLVINHGQWIDSIQMEY--EDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG
        K++ I HG WIDS Q+++  +D+ G LVW++ +GG GG  +E+ LE DEH + V GYYSDI+KWGI ATVIRSLTL+TNKR YGPFGIEDGTKFSFP  G
Subjt:  KQLVINHGQWIDSIQMEY--EDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG

Query:  LKVVGFHGRSGLYLDAIGLSVQTTQINGIGPEKFSFGKYGGEGGNP
        LK+VGFHGRSG+YLDAIGL ++ TQING+ PEKFS G+YGGEGG+P
Subjt:  LKVVGFHGRSGLYLDAIGLSVQTTQINGIGPEKFSFGKYGGEGGNP

A0A5A7TIW6 Agglutinin-like5.0e-5066Show/hide
Query:  KQLVINHGQWIDSIQMEY--EDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG
        K++ I HG WIDS Q+++  +D+ G LVW++ +GG GG  +E+ LE DEH + V GYYSDI+KWGI ATVIRSLTL+TNKR YGPFGIEDGTKFSFP  G
Subjt:  KQLVINHGQWIDSIQMEY--EDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG

Query:  LKVVGFHGRSGLYLDAIGLSVQTTQI----NGIGPEKFSFGKYGGEGGNP
        LK+VGFHGRSG+YLDAIGL ++ TQI    NG+ PEKFS G+YGGEGG+P
Subjt:  LKVVGFHGRSGLYLDAIGLSVQTTQI----NGIGPEKFSFGKYGGEGGNP

A0A6J1C6X3 jacalin-related lectin 3-like8.0e-5672.92Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK
        ++LVI HG WIDSIQMEYED+ G+ +WS++HGG GG +SE+ LE DEHLVL+ GYYS++R+WGI ATVIRSLTLKT+KR YGPFGIEDGTKFSFP TGLK
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK

Query:  VVGFHGRSGLYLDAIGLSVQTTQINGIGPEKFSFGKYGGEGGNP
        +VGFHGRS LYLDAIGL V+ +QIN  GPEK+S G+ GGEGG+P
Subjt:  VVGFHGRSGLYLDAIGLSVQTTQINGIGPEKFSFGKYGGEGGNP

A0A6J1FD77 jacalin-related lectin 4-like5.5e-5775.34Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK
        ++LVI HG WIDSIQMEYED+N  L+WS++HGG+GG +SE+ LE DEHLVLV+GYYSD+ KWGIAATVIRSLTLKTNKR YGPFGIEDGTKFSFP TGLK
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK

Query:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGGNP
        +VG HGRS   LDAIGLSV T  TQI G+G EKFS G+ GGEGG P
Subjt:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGGNP

A0A6J1IKB1 jacalin-related lectin 3-like1.6e-5675.69Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK
        ++LVI HG WIDSIQMEYED+N +L+WSK+HGG+GG +SE+ LE DEHLVLV+GYYSD+ KWGIAATVIRSLTLKTNKR YGPFGIEDGTKFSFP TGLK
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLK

Query:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGG
        +VG HGRS   LDAIG+SV T  TQI G+G EKFS G+ GGEGG
Subjt:  VVGFHGRSGLYLDAIGLSVQT--TQINGIGPEKFSFGKYGGEGG

SwissProt top hitse value%identityAlignment
F4HQX1 Jacalin-related lectin 32.0e-2748.36Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG
        KQ++I HG  IDSIQ+EY DKNG  VWS++ GG GG +  ++  +   E+L+ V+G Y     WG     +RSLT ++N+R YGPFG++ GT F+ P +G
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG

Query:  LKVVGFHGRSGLYLDAIGLSVQ
         K++GFHG++G YLDAIG+  Q
Subjt:  LKVVGFHGRSGLYLDAIGLSVQ

O04310 Jacalin-related lectin 342.5e-1438.14Show/hide
Query:  KQLVINHGQ-WIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNK-RIYGPFGIEDGTKFSFPLTG
        K++ +  GQ  + +++ EY++ +  +   +R         E  LESDE++  V+GYY   + +G+  TV+ +L  KT+K +  GPFGI  GTKF F   G
Subjt:  KQLVINHGQ-WIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNK-RIYGPFGIEDGTKFSFPLTG

Query:  LKVVGFHGRSGLYLDAIG
         K+ GFHGR+G Y++AIG
Subjt:  LKVVGFHGRSGLYLDAIG

P82859 Agglutinin8.3e-1843.75Show/hide
Query:  IDSIQMEYEDKNGELVWSKRHGGNGGSQSE-IALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLKVVGFHGRS
        I +I++ Y+ K+GE + S +HGG GG   + I LE S E L+ + G+Y  +   G +   +RS+T  TNK  YGP+G E G  F+  +   +VVGFHGRS
Subjt:  IDSIQMEYEDKNGELVWSKRHGGNGGSQSE-IALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGLKVVGFHGRS

Query:  GLYLDAIGLSVQ
        G YLDAIG+ ++
Subjt:  GLYLDAIGLSVQ

P83304 Mannose/glucose-specific lectin (Fragment)6.0e-1634.44Show/hide
Query:  GQWIDSI---------QMEYEDKNGELVWSKRHGGNG----GSQSEIALESD-EHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFS
        G WI  I          + ++D NG      + GG      G + ++ ++ + EHL  + G Y + + +     V+ SL+  TN   +GPFGI  GT FS
Subjt:  GQWIDSI---------QMEYEDKNGELVWSKRHGGNG----GSQSEIALESD-EHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFS

Query:  FPLTGLKVVGFHGRSGLYLDAIGLSVQTTQINGIGPEKFSFGKYGGEGGNP
         P+ G  V GFHG+SG YLD+IG+ V+   + G      S G +GG GG+P
Subjt:  FPLTGLKVVGFHGRSGLYLDAIGLSVQTTQINGIGPEKFSFGKYGGEGGNP

Q9SSM3 Jacalin-related lectin 192.1e-2149.57Show/hide
Query:  QLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGL
        +LV +H   IDSI + Y DKNG+   S++HGG GG++ SEI L+  +E+L  V GYY  +   G    VIRS+T K+NK++YGP+G+E GT F+F + G 
Subjt:  QLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGL

Query:  KVVGFHGRSGLYLDAIG
        ++VG +GRSG YLD+IG
Subjt:  KVVGFHGRSGLYLDAIG

Arabidopsis top hitse value%identityAlignment
AT1G19715.1 Mannose-binding lectin superfamily protein1.4e-2848.36Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG
        KQ++I HG  IDSIQ+EY DKNG  VWS++ GG GG +  ++  +   E+L+ V+G Y     WG     +RSLT ++N+R YGPFG++ GT F+ P +G
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG

Query:  LKVVGFHGRSGLYLDAIGLSVQ
         K++GFHG++G YLDAIG+  Q
Subjt:  LKVVGFHGRSGLYLDAIGLSVQ

AT1G19715.2 Mannose-binding lectin superfamily protein1.4e-2848.36Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG
        KQ++I HG  IDSIQ+EY DKNG  VWS++ GG GG +  ++  +   E+L+ V+G Y     WG     +RSLT ++N+R YGPFG++ GT F+ P +G
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG

Query:  LKVVGFHGRSGLYLDAIGLSVQ
         K++GFHG++G YLDAIG+  Q
Subjt:  LKVVGFHGRSGLYLDAIGLSVQ

AT1G19715.3 Mannose-binding lectin superfamily protein1.4e-2848.36Show/hide
Query:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG
        KQ++I HG  IDSIQ+EY DKNG  VWS++ GG GG +  ++  +   E+L+ V+G Y     WG     +RSLT ++N+R YGPFG++ GT F+ P +G
Subjt:  KQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTG

Query:  LKVVGFHGRSGLYLDAIGLSVQ
         K++GFHG++G YLDAIG+  Q
Subjt:  LKVVGFHGRSGLYLDAIGLSVQ

AT1G73040.1 Mannose-binding lectin superfamily protein1.5e-2249.57Show/hide
Query:  QLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGL
        +LV +H   IDSI + Y DKNG+   S++HGG GG++ SEI L+  +E+L  V GYY  +   G    VIRS+T K+NK++YGP+G+E GT F+F + G 
Subjt:  QLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQ-SEIALE-SDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSFPLTGL

Query:  KVVGFHGRSGLYLDAIG
        ++VG +GRSG YLD+IG
Subjt:  KVVGFHGRSGLYLDAIG

AT3G16460.1 Mannose-binding lectin superfamily protein1.8e-1538.14Show/hide
Query:  KQLVINHGQ-WIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNK-RIYGPFGIEDGTKFSFPLTG
        K++ +  GQ  + +++ EY++ +  +   +R         E  LESDE++  V+GYY   + +G+  TV+ +L  KT+K +  GPFGI  GTKF F   G
Subjt:  KQLVINHGQ-WIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNK-RIYGPFGIEDGTKFSFPLTG

Query:  LKVVGFHGRSGLYLDAIG
         K+ GFHGR+G Y++AIG
Subjt:  LKVVGFHGRSGLYLDAIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGAAGGTGGAGATCCTTGGGATGAGAATTTTAGGACAGTCCAAGCAATTGGTGATTAATCATGGACAGTGGATCGACTCCATACAAATGGAATATGAAGACAA
GAATGGGGAATTAGTTTGGTCTAAGAGGCATGGTGGAAATGGAGGTTCTCAATCAGAGATTGCTCTGGAATCAGATGAGCATCTTGTTTTGGTCGATGGCTACTACAGTG
ACATACGTAAGTGGGGAATTGCTGCCACTGTGATTCGATCCTTGACTCTAAAAACCAACAAAAGAATTTATGGGCCATTTGGGATTGAGGATGGTACCAAATTTTCATTT
CCATTAACGGGGCTAAAGGTTGTTGGCTTTCATGGAAGATCTGGCTTGTATTTGGATGCAATTGGGCTCTCCGTACAAACAACTCAAATAAATGGGATTGGGCCAGAGAA
ATTTAGCTTCGGAAAATATGGAGGTGAAGGTGGAAATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGAAGGTGGAGATCCTTGGGATGAGAATTTTAGGACAGTCCAAGCAATTGGTGATTAATCATGGACAGTGGATCGACTCCATACAAATGGAATATGAAGACAA
GAATGGGGAATTAGTTTGGTCTAAGAGGCATGGTGGAAATGGAGGTTCTCAATCAGAGATTGCTCTGGAATCAGATGAGCATCTTGTTTTGGTCGATGGCTACTACAGTG
ACATACGTAAGTGGGGAATTGCTGCCACTGTGATTCGATCCTTGACTCTAAAAACCAACAAAAGAATTTATGGGCCATTTGGGATTGAGGATGGTACCAAATTTTCATTT
CCATTAACGGGGCTAAAGGTTGTTGGCTTTCATGGAAGATCTGGCTTGTATTTGGATGCAATTGGGCTCTCCGTACAAACAACTCAAATAAATGGGATTGGGCCAGAGAA
ATTTAGCTTCGGAAAATATGGAGGTGAAGGTGGAAATCCTTGA
Protein sequenceShow/hide protein sequence
MEAKVEILGMRILGQSKQLVINHGQWIDSIQMEYEDKNGELVWSKRHGGNGGSQSEIALESDEHLVLVDGYYSDIRKWGIAATVIRSLTLKTNKRIYGPFGIEDGTKFSF
PLTGLKVVGFHGRSGLYLDAIGLSVQTTQINGIGPEKFSFGKYGGEGGNP