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Clc05G20870 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G20870
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionjacalin-related lectin 3-like
Genome locationClcChr05:29566957..29567437
RNA-Seq ExpressionClc05G20870
SyntenyClc05G20870
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:0035556 - intracellular signal transduction (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001229 - Jacalin-like lectin domain
IPR033734 - Jacalin-like lectin domain, plant
IPR036404 - Jacalin-like lectin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591308.1 hypothetical protein SDJN03_13654, partial [Cucurbita argyrosperma subsp. sororia]5.0e-4183.51Show/hide
Query:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ
        WS++HGG+GGF+SEVVLELDEHLVLV+GYYSD+HKWGIAATVIRSLTLK+NKRTYGPFGIEDGTKFSFPF G K+VG HGRS   LDAIGLS+ TTQ
Subjt:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ

KAG7024193.1 hypothetical protein SDJN02_13007, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-4183.51Show/hide
Query:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ
        WS++HGG+GGF+SEVVLELDEHLVLV+GYYSD+HKWGIAATVIRSLTLK+NKRTYGPFGIEDGTKFSFPF G K+VG HGRS   LDAIGLS+ TTQ
Subjt:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ

XP_022936285.1 jacalin-related lectin 4-like [Cucurbita moschata]5.0e-4183.51Show/hide
Query:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ
        WS++HGG+GGF+SEVVLELDEHLVLV+GYYSD+HKWGIAATVIRSLTLK+NKRTYGPFGIEDGTKFSFPF G K+VG HGRS   LDAIGLS+ TTQ
Subjt:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ

XP_022975798.1 jacalin-related lectin 3-like [Cucurbita maxima]3.8e-4183.51Show/hide
Query:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ
        WSK+HGG+GGF+SEVVLELDEHLVLV+GYYSD+HKWGIAATVIRSLTLK+NKRTYGPFGIEDGTKFSFPF G K+VG HGRS   LDAIG+S+ TTQ
Subjt:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ

XP_038898646.1 mannose/glucose-specific lectin-like [Benincasa hispida]1.6e-4486.27Show/hide
Query:  GSWWWSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTT
        G   WS+RHGG GG QSEVV+ELDEHLVLVHGYYSDI++WGI+ATVIRSLTL++NKRTYGPFGIEDGTKFSFPF GQKLVGFHGRSGLYLDAIGLSIDTT
Subjt:  GSWWWSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTT

Query:  QM
        Q+
Subjt:  QM

TrEMBL top hitse value%identityAlignment
A0A1S3CRN3 agglutinin-like4.7e-3773.79Show/hide
Query:  MGSWWWSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDT
        +G+  W++ +GG GGF +EVVLELDEH + V GYYSDI KWGI ATVIRSLTL++NKRTYGPFGIEDGTKFSFPF G KLVGFHGRSG+YLDAIGL +  
Subjt:  MGSWWWSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDT

Query:  TQM
        TQ+
Subjt:  TQM

A0A5A7TIW6 Agglutinin-like4.7e-3773.79Show/hide
Query:  MGSWWWSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDT
        +G+  W++ +GG GGF +EVVLELDEH + V GYYSDI KWGI ATVIRSLTL++NKRTYGPFGIEDGTKFSFPF G KLVGFHGRSG+YLDAIGL +  
Subjt:  MGSWWWSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDT

Query:  TQM
        TQ+
Subjt:  TQM

A0A6J1C6X3 jacalin-related lectin 3-like8.5e-3976.53Show/hide
Query:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQM
        WS++HGG GGF+SEVVLELDEHLVL+HGYYS++ +WGI ATVIRSLTLK++KR+YGPFGIEDGTKFSFPF G K+VGFHGRS LYLDAIGL +  +Q+
Subjt:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQM

A0A6J1FD77 jacalin-related lectin 4-like2.4e-4183.51Show/hide
Query:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ
        WS++HGG+GGF+SEVVLELDEHLVLV+GYYSD+HKWGIAATVIRSLTLK+NKRTYGPFGIEDGTKFSFPF G K+VG HGRS   LDAIGLS+ TTQ
Subjt:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ

A0A6J1IKB1 jacalin-related lectin 3-like1.8e-4183.51Show/hide
Query:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ
        WSK+HGG+GGF+SEVVLELDEHLVLV+GYYSD+HKWGIAATVIRSLTLK+NKRTYGPFGIEDGTKFSFPF G K+VG HGRS   LDAIG+S+ TTQ
Subjt:  WSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSIDTTQ

SwissProt top hitse value%identityAlignment
F4HQX1 Jacalin-related lectin 31.2e-1846.94Show/hide
Query:  GSWWWSKRHGGNGGFQSEVVLELD---EHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGL
        GS  WS++ GG GG + + V + D   E+L+ V+G Y     WG     +RSLT +SN+R YGPFG++ GT F+ P  G K++GFHG++G YLDAIG+
Subjt:  GSWWWSKRHGGNGGFQSEVVLELD---EHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGL

O04310 Jacalin-related lectin 343.9e-1248.78Show/hide
Query:  GFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNK-RTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIG
        GF+ E  LE DE++  V GYY     +G+  TV+ +L  K++K +T GPFGI  GTKF F   G K+ GFHGR+G Y++AIG
Subjt:  GFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNK-RTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIG

P18674 Agglutinin alpha chain7.3e-1144.16Show/hide
Query:  FQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLD
        F SE ++E+  ++  V GY           TVIRSLT K+NK+TYGP+G+ +GT FS P     +VGF G  G +LD
Subjt:  FQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLD

P82859 Agglutinin7.8e-1341.05Show/hide
Query:  SKRHGGNGGFQSE-VVLELD-EHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSID
        S +HGG GG   + + LE+  E L+ + G+Y  +   G +   +RS+T  +NK  YGP+G E G  F+      ++VGFHGRSG YLDAIG+ ++
Subjt:  SKRHGGNGGFQSE-VVLELD-EHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSID

Q9SSM3 Jacalin-related lectin 195.2e-1748.94Show/hide
Query:  SKRHGGNGGFQ-SEVVLEL-DEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSI
        S++HGG GG + SE+ L+  +E+L  V GYY  +   G    VIRS+T KSNK+ YGP+G+E GT F+F   G ++VG +GRSG YLD+IG  +
Subjt:  SKRHGGNGGFQ-SEVVLEL-DEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSI

Arabidopsis top hitse value%identityAlignment
AT1G19715.1 Mannose-binding lectin superfamily protein8.8e-2046.94Show/hide
Query:  GSWWWSKRHGGNGGFQSEVVLELD---EHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGL
        GS  WS++ GG GG + + V + D   E+L+ V+G Y     WG     +RSLT +SN+R YGPFG++ GT F+ P  G K++GFHG++G YLDAIG+
Subjt:  GSWWWSKRHGGNGGFQSEVVLELD---EHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGL

AT1G19715.2 Mannose-binding lectin superfamily protein8.8e-2046.94Show/hide
Query:  GSWWWSKRHGGNGGFQSEVVLELD---EHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGL
        GS  WS++ GG GG + + V + D   E+L+ V+G Y     WG     +RSLT +SN+R YGPFG++ GT F+ P  G K++GFHG++G YLDAIG+
Subjt:  GSWWWSKRHGGNGGFQSEVVLELD---EHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGL

AT1G19715.3 Mannose-binding lectin superfamily protein8.8e-2046.94Show/hide
Query:  GSWWWSKRHGGNGGFQSEVVLELD---EHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGL
        GS  WS++ GG GG + + V + D   E+L+ V+G Y     WG     +RSLT +SN+R YGPFG++ GT F+ P  G K++GFHG++G YLDAIG+
Subjt:  GSWWWSKRHGGNGGFQSEVVLELD---EHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGL

AT1G73040.1 Mannose-binding lectin superfamily protein3.7e-1848.94Show/hide
Query:  SKRHGGNGGFQ-SEVVLEL-DEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSI
        S++HGG GG + SE+ L+  +E+L  V GYY  +   G    VIRS+T KSNK+ YGP+G+E GT F+F   G ++VG +GRSG YLD+IG  +
Subjt:  SKRHGGNGGFQ-SEVVLEL-DEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIGLSI

AT3G16460.1 Mannose-binding lectin superfamily protein2.7e-1348.78Show/hide
Query:  GFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNK-RTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIG
        GF+ E  LE DE++  V GYY     +G+  TV+ +L  K++K +T GPFGI  GTKF F   G K+ GFHGR+G Y++AIG
Subjt:  GFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNK-RTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGTGGATCGACTCCATTCAAATGGAATATGAAGATGAGAATGGGGAGTTGGTGGTGGTCTAAGAGGCATGGTGGAAATGGAGGTTTCCAATCAGAGGTTGTTCT
AGAATTAGATGAGCATCTTGTTTTGGTTCATGGCTACTATAGTGACATACATAAGTGGGGAATTGCCGCCACTGTGATTCGATCCTTGACTCTAAAATCCAATAAAAGAA
CTTACGGGCCATTTGGGATTGAGGATGGAACCAAATTTTCATTTCCATTTATAGGGCAAAAGCTTGTTGGCTTTCATGGAAGATCTGGCTTGTATCTGGATGCAATTGGG
CTCTCCATAGATACAACTCAAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATGTGGATCGACTCCATTCAAATGGAATATGAAGATGAGAATGGGGAGTTGGTGGTGGTCTAAGAGGCATGGTGGAAATGGAGGTTTCCAATCAGAGGTTGTTCT
AGAATTAGATGAGCATCTTGTTTTGGTTCATGGCTACTATAGTGACATACATAAGTGGGGAATTGCCGCCACTGTGATTCGATCCTTGACTCTAAAATCCAATAAAAGAA
CTTACGGGCCATTTGGGATTGAGGATGGAACCAAATTTTCATTTCCATTTATAGGGCAAAAGCTTGTTGGCTTTCATGGAAGATCTGGCTTGTATCTGGATGCAATTGGG
CTCTCCATAGATACAACTCAAATGTAG
Protein sequenceShow/hide protein sequence
MECGSTPFKWNMKMRMGSWWWSKRHGGNGGFQSEVVLELDEHLVLVHGYYSDIHKWGIAATVIRSLTLKSNKRTYGPFGIEDGTKFSFPFIGQKLVGFHGRSGLYLDAIG
LSIDTTQM