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Clc05G20980 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G20980
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionjacalin-related lectin 3-like
Genome locationClcChr05:29619331..29622742
RNA-Seq ExpressionClc05G20980
SyntenyClc05G20980
Gene Ontology termsNA
InterPro domainsIPR001229 - Jacalin-like lectin domain
IPR036404 - Jacalin-like lectin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5455855.1 hypothetical protein F2P56_025389, partial [Juglans regia]2.7e-1250.55Show/hide
Query:  VVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQAL
        + LDY +E+L SIHG     ND G   I SLTLESNKK+YGP+G + G  F F   T  KIVGFHG+S+  L +IG  + PI N   ++AL
Subjt:  VVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQAL

XP_038877874.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120070094 [Benincasa hispida]7.1e-1349.02Show/hide
Query:  DVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPI
        D NG + R    R    +V L+Y +EYL+SI G + +       +I SL+LESNKK YGP+G + G  F FP T+  KIVGFHGRS   L SIGI V PI
Subjt:  DVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPI

Query:  HN
         N
Subjt:  HN

XP_038898849.1 jacalin-related lectin 3-like isoform X1 [Benincasa hispida]4.3e-1843.92Show/hide
Query:  LDIMDWMENIRRVRSEILDDDDDDDDDDDMWVEKGGDVN-GTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDND-DGKSIIGSLTLESNKKSYGPYG
        +DI+     I  +R+E  DD  +    D    + GG  N GT  +          VVL+Y NEYLVSIHG +  +   D   +I SLT ESNK+S+GP+G
Subjt:  LDIMDWMENIRRVRSEILDDDDDDDDDDDMWVEKGGDVN-GTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDND-DGKSIIGSLTLESNKKSYGPYG

Query:  DDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQALE
         + G  FWFPT+   K+VGFHG++   L SIGIKVVP+HN TI  ++E
Subjt:  DDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQALE

XP_038898850.1 jacalin-related lectin 19-like isoform X2 [Benincasa hispida]1.0e-1955.91Show/hide
Query:  VVLDYSNEYLVSIHGCLSHDND-DGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQALE
        VVL+Y NEYLVSIHG +  +   D   +I SLT ESNK+S+GP+G + G  FWFPT+   K+VGFHG++   L SIGIKVVP+HN TI  ++E
Subjt:  VVLDYSNEYLVSIHGCLSHDND-DGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQALE

XP_042493605.1 jacalin-related lectin 3 [Macadamia integrifolia]3.2e-1343.1Show/hide
Query:  MWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISI
        +W EK    +G TG  K  R     V LD+ +E+L SIHG     N+ G   + SLT+ESNK++YGPYG + G +F FP T   KIVGFHG++   L SI
Subjt:  MWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISI

Query:  GIKVVPIHNTTINQAL
        G+ + PI+    ++ L
Subjt:  GIKVVPIHNTTINQAL

TrEMBL top hitse value%identityAlignment
A0A2I4ENT9 jacalin-related lectin 3 isoform X21.3e-1250.55Show/hide
Query:  VVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQAL
        + LDY +E+L SIHG     ND G   I SLTLESNKK+YGP+G + G  F F   T  KIVGFHG+S+  L +IG  + PI N   ++AL
Subjt:  VVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQAL

A0A2I4ENU7 jacalin-related lectin 3 isoform X11.3e-1250.55Show/hide
Query:  VVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQAL
        + LDY +E+L SIHG     ND G   I SLTLESNKK+YGP+G + G  F F   T  KIVGFHG+S+  L +IG  + PI N   ++AL
Subjt:  VVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQAL

A0A6J1IKB1 jacalin-related lectin 3-like2.2e-1242.24Show/hide
Query:  DDDDDDMWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSI---HGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHG
        D + +  W  K G+  G+          +W VV+DY +EYL+SI   +GC+ +   D  ++I SLTLE+N +SYGP+G D G +F FP  T +KIVGFHG
Subjt:  DDDDDDMWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSI---HGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHG

Query:  RSDSCLISIGIKVVPI
        +S   L +IG+ V  I
Subjt:  RSDSCLISIGIKVVPI

A0A6P9ERV4 jacalin-related lectin 3-like isoform X21.3e-1250.55Show/hide
Query:  VVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQAL
        + LDY +E+L SIHG     ND G   I SLTLESNKK+YGP+G + G  F F   T  KIVGFHG+S+  L +IG  + PI N   ++AL
Subjt:  VVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQAL

A0A6P9EVA4 jacalin-related lectin 3-like isoform X11.3e-1250.55Show/hide
Query:  VVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQAL
        + LDY +E+L SIHG     ND G   I SLTLESNKK+YGP+G + G  F F   T  KIVGFHG+S+  L +IG  + PI N   ++AL
Subjt:  VVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQAL

SwissProt top hitse value%identityAlignment
F4HQX1 Jacalin-related lectin 37.7e-1031.3Show/hide
Query:  WMENIRRVRSEILDDDDDDDDDDDMWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRF
        W + +     +I+       D   +  +K G    +  R  +G  +   V  DY +EYL+S++G     +  G   + SLT ESN++ YGP+G D+G  F
Subjt:  WMENIRRVRSEILDDDDDDDDDDDMWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRF

Query:  WFPTTTATKIVGFHGRSDSCLISIGIKVVPI
          P  + +KI+GFHG++   L +IG+   PI
Subjt:  WFPTTTATKIVGFHGRSDSCLISIGIKVVPI

O65187 Myrosinase-binding protein 12.1e-0731.07Show/hide
Query:  KGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKV
        KG       G  K+  +   +  LDY +EY+ S+ G           ++ SLT ++NK++  P+G  AG  F        K+VGFHG++   +  IG+ +
Subjt:  KGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKV

Query:  VPI
        VPI
Subjt:  VPI

O80998 Jacalin-related lectin 204.7e-0737.5Show/hide
Query:  LDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPI
        LDY +EY+ ++ G          S+I  L  ++NK++  PYG DAG  F        K+VGFHG++   L  IG+ V PI
Subjt:  LDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPI

Q9FGC5 Jacalin-related lectin 411.1e-0842.68Show/hide
Query:  LDYSNEYLVSIHGCLSHDNDDG--KSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPI
        LDY NEY+ S+ GC  HD   G    +I  L  ++NK++  P+G +AG  F      + KI GFHG+S + L  IG+ VVPI
Subjt:  LDYSNEYLVSIHGCLSHDNDDG--KSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPI

Q9SSM3 Jacalin-related lectin 199.4e-0832.76Show/hide
Query:  DVNGTTGRAKR----GRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIK
        D NG   ++++    G  +   + L Y  EYL  + G      + G  +I S+T +SNK+ YGPYG + G  F F +    +IVG +GRS   L SIG  
Subjt:  DVNGTTGRAKR----GRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIK

Query:  VVPIHNTTINQALELK
        +    +T +   L  K
Subjt:  VVPIHNTTINQALELK

Arabidopsis top hitse value%identityAlignment
AT1G19715.1 Mannose-binding lectin superfamily protein5.4e-1131.3Show/hide
Query:  WMENIRRVRSEILDDDDDDDDDDDMWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRF
        W + +     +I+       D   +  +K G    +  R  +G  +   V  DY +EYL+S++G     +  G   + SLT ESN++ YGP+G D+G  F
Subjt:  WMENIRRVRSEILDDDDDDDDDDDMWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRF

Query:  WFPTTTATKIVGFHGRSDSCLISIGIKVVPI
          P  + +KI+GFHG++   L +IG+   PI
Subjt:  WFPTTTATKIVGFHGRSDSCLISIGIKVVPI

AT1G19715.2 Mannose-binding lectin superfamily protein4.9e-1235.4Show/hide
Query:  DDDDDDMWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSD
        D +   +W EK         R  +G  +   V  DY +EYL+S++G     +  G   + SLT ESN++ YGP+G D+G  F  P  + +KI+GFHG++ 
Subjt:  DDDDDDMWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSD

Query:  SCLISIGIKVVPI
          L +IG+   PI
Subjt:  SCLISIGIKVVPI

AT1G19715.3 Mannose-binding lectin superfamily protein5.4e-1131.3Show/hide
Query:  WMENIRRVRSEILDDDDDDDDDDDMWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRF
        W + +     +I+       D   +  +K G    +  R  +G  +   V  DY +EYL+S++G     +  G   + SLT ESN++ YGP+G D+G  F
Subjt:  WMENIRRVRSEILDDDDDDDDDDDMWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRF

Query:  WFPTTTATKIVGFHGRSDSCLISIGIKVVPI
          P  + +KI+GFHG++   L +IG+   PI
Subjt:  WFPTTTATKIVGFHGRSDSCLISIGIKVVPI

AT1G73040.1 Mannose-binding lectin superfamily protein6.7e-0932.76Show/hide
Query:  DVNGTTGRAKR----GRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIK
        D NG   ++++    G  +   + L Y  EYL  + G      + G  +I S+T +SNK+ YGPYG + G  F F +    +IVG +GRS   L SIG  
Subjt:  DVNGTTGRAKR----GRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIK

Query:  VVPIHNTTINQALELK
        +    +T +   L  K
Subjt:  VVPIHNTTINQALELK

AT5G35940.1 Mannose-binding lectin superfamily protein7.9e-1042.68Show/hide
Query:  LDYSNEYLVSIHGCLSHDNDDG--KSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPI
        LDY NEY+ S+ GC  HD   G    +I  L  ++NK++  P+G +AG  F      + KI GFHG+S + L  IG+ VVPI
Subjt:  LDYSNEYLVSIHGCLSHDNDDG--KSIIGSLTLESNKKSYGPYGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAAGGCTGCAACGGCTCTCCTTGGCCTCATCAACTTTAGATATAATGGATTGGATGGAAAATATTAGAAGAGTAAGAAGTGAAATATTAGATGATGATGATGA
TGATGATGATGATGATGATATGTGGGTGGAAAAAGGTGGTGATGTCAATGGGACAACAGGGCGGGCCAAGAGGGGAAGAATGGAGCGATGGAGTGTGGTTCTTGATTATT
CAAATGAGTATCTAGTTTCAATTCATGGATGTTTGAGTCATGATAATGATGATGGCAAGAGTATTATTGGATCATTAACTCTAGAAAGCAACAAAAAGAGTTACGGGCCA
TATGGTGATGATGCAGGACCAAGATTCTGGTTTCCTACTACTACTGCTACTAAAATTGTTGGCTTTCATGGTAGATCCGATTCATGTCTTATTTCTATTGGGATTAAAGT
TGTCCCAATTCACAACACCACCATTAACCAGGCGTTAGAGTTGAAATGGAGCCAAATCGAGCCAAACAGAGCTAAATTGCATCAACCGGGAGAGAGAGAGGATGAAGCTG
CTGAAATGCCCCTGGCGTGGCGCTCCGATGTTGTTGTCGCATGTATTCCAACACCGCGATGTTGTACCATAACGCCGCAACGCCATCGGATCGCCTCATTAGCCGAATTT
CACACCAAATTCTTTGATTCCTTCTCTATTTCTTCATACTTGGATGTATCTTTACGGTTTCTTGATGTTAGTTATGGAGATCATCGACTAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAAGGCTGCAACGGCTCTCCTTGGCCTCATCAACTTTAGATATAATGGATTGGATGGAAAATATTAGAAGAGTAAGAAGTGAAATATTAGATGATGATGATGA
TGATGATGATGATGATGATATGTGGGTGGAAAAAGGTGGTGATGTCAATGGGACAACAGGGCGGGCCAAGAGGGGAAGAATGGAGCGATGGAGTGTGGTTCTTGATTATT
CAAATGAGTATCTAGTTTCAATTCATGGATGTTTGAGTCATGATAATGATGATGGCAAGAGTATTATTGGATCATTAACTCTAGAAAGCAACAAAAAGAGTTACGGGCCA
TATGGTGATGATGCAGGACCAAGATTCTGGTTTCCTACTACTACTGCTACTAAAATTGTTGGCTTTCATGGTAGATCCGATTCATGTCTTATTTCTATTGGGATTAAAGT
TGTCCCAATTCACAACACCACCATTAACCAGGCGTTAGAGTTGAAATGGAGCCAAATCGAGCCAAACAGAGCTAAATTGCATCAACCGGGAGAGAGAGAGGATGAAGCTG
CTGAAATGCCCCTGGCGTGGCGCTCCGATGTTGTTGTCGCATGTATTCCAACACCGCGATGTTGTACCATAACGCCGCAACGCCATCGGATCGCCTCATTAGCCGAATTT
CACACCAAATTCTTTGATTCCTTCTCTATTTCTTCATACTTGGATGTATCTTTACGGTTTCTTGATGTTAGTTATGGAGATCATCGACTAAGGTAA
Protein sequenceShow/hide protein sequence
MKERLQRLSLASSTLDIMDWMENIRRVRSEILDDDDDDDDDDDMWVEKGGDVNGTTGRAKRGRMERWSVVLDYSNEYLVSIHGCLSHDNDDGKSIIGSLTLESNKKSYGP
YGDDAGPRFWFPTTTATKIVGFHGRSDSCLISIGIKVVPIHNTTINQALELKWSQIEPNRAKLHQPGEREDEAAEMPLAWRSDVVVACIPTPRCCTITPQRHRIASLAEF
HTKFFDSFSISSYLDVSLRFLDVSYGDHRLR