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Clc05G22060 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G22060
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCalcium-binding EF-hand family protein, putative
Genome locationClcChr05:30432933..30434053
RNA-Seq ExpressionClc05G22060
SyntenyClc05G22060
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064378.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]2.2e-3384.71Show/hide
Query:  TKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV
        ++A +SE+AYSAKELR+IF+QMDTNEDGGLGLFEIKNALK+LDAEMPVHLA+ ALC+ADRNRDGKLGE+EIDQFVKYMMS+GYVV
Subjt:  TKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV

KAG6608479.1 hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3180.23Show/hide
Query:  KTKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV
        K  A  SE+ YSAKELREIF+QMDTNEDGGLGLFEIK ALK+LDAE PVHLAFKALC +DRNRDGKLG DEID+F+KY+MS+GYVV
Subjt:  KTKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV

KAG7024250.1 hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3082.5Show/hide
Query:  SENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV
        S++AYS KEL+EIF QMDTNEDGGLGLFEIKNALK+LDAE P+HLA+KALCHADRN DGKLGE+EID+FVKYM+S+GYVV
Subjt:  SENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV

KAG7037807.1 hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-3180.23Show/hide
Query:  KTKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV
        K  A  SE+ YSAKELREIF+QMDTNEDGGLGLFEIK ALK+LDAE PVHLAFKALC +DRNRDGKLG DEID+F+KY+MS+GYVV
Subjt:  KTKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV

KGN55187.1 hypothetical protein Csa_012728 [Cucumis sativus]1.6e-3383.33Show/hide
Query:  KTKAK----ASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV
        KTK+     +SE+AYSAKELR+IF+QMDTNEDGGLGLFEIKNALK+LDAEMPVHLA+ ALCHADRNRDGKLGE+EIDQFVKYMMS+GYVV
Subjt:  KTKAK----ASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV

TrEMBL top hitse value%identityAlignment
A0A0A0L3J7 Uncharacterized protein8.0e-3483.33Show/hide
Query:  KTKAK----ASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV
        KTK+     +SE+AYSAKELR+IF+QMDTNEDGGLGLFEIKNALK+LDAEMPVHLA+ ALCHADRNRDGKLGE+EIDQFVKYMMS+GYVV
Subjt:  KTKAK----ASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV

A0A2P5F8Q1 Parvalbumin3.1e-0941.18Show/hide
Query:  TKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV
        T  +  +  Y  K+L+E+F + D N DG L   E+KNA     +  P   AF+AL HAD+NR+G + EDE+D  VKY   +GY +
Subjt:  TKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV

A0A5D3D9N2 Putative calcium-binding protein CML101.0e-3384.71Show/hide
Query:  TKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV
        ++A +SE+AYSAKELR+IF+QMDTNEDGGLGLFEIKNALK+LDAEMPVHLA+ ALC+ADRNRDGKLGE+EIDQFVKYMMS+GYVV
Subjt:  TKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV

A0A5N6RQD5 Uncharacterized protein1.8e-0939.53Show/hide
Query:  KTKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV
        K K K     Y+  +L  +F + D N DG L   E++NA   L +  P   AF+ALCHAD+N DG + E E+D  V+Y +  GY +
Subjt:  KTKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV

A0A6A1UYX3 Putative calcium-binding protein CML108.0e-1044.74Show/hide
Query:  YSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV
        Y+ ++LR +F + DTN DG L   E++NA + L +  P   AF+AL HADRN DG++ E E+D  V Y +  GY V
Subjt:  YSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACGAAGGCGAAGGCATCGGAGAACGCCTACTCGGCCAAGGAACTGAGAGAGATCTTTAGCCAAATGGATACGAATGAAGACGGCGGATTGGGATTGTTCGAGAT
CAAGAACGCATTGAAGAGACTCGACGCTGAAATGCCGGTTCATCTTGCTTTCAAGGCTCTCTGTCACGCCGATCGAAACAGAGATGGAAAGCTTGGCGAAGACGAGATCG
ATCAGTTCGTCAAGTACATGATGAGCCAAGGTTATGTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
CTAAGTTGTGTGAGTGGTAAAGATTTTTATGTAATTGTAATAATTTTTTTAGTTTGTACCTTTTTGCTAAGGTTTGAATTTTATTTTATTTTTCGTTAATTGTTGTGTTT
TTTAATTTGATTGTTTTGTTTTAATTTCTTTTTTATTATAGCTTATTGTTATTTCTATTGAAACATTTTCTATTTTCTATTGTATCCATAAACATTCAAATATGGAATGT
TTGAATGTTAAAACTTGATGCTAAAACAGAGACACCATTAAAATTCATCGTAAAAGACAGTTCCCAAATTGGACGACACTGAAAAGCCGAATTGGATTCCAATTTTGGAG
GCAAACCAATCCCAATTGGAGAACACAAGATAACTCCGCATCTCAATTCTAATCTCCTCAACCTGCCGCCATTAATTGTCATTTTCTCTATAAATTCCCTCTTTCCTTCA
ATTCAATTCTCAACAGATCAAGTCCAATTGCTCAATATCACAAAATCAATTACAGAACCACGTCGTTGATCGGTCAAAAAATGAAGACGAAGGCGAAGGCATCGGAGAAC
GCCTACTCGGCCAAGGAACTGAGAGAGATCTTTAGCCAAATGGATACGAATGAAGACGGCGGATTGGGATTGTTCGAGATCAAGAACGCATTGAAGAGACTCGACGCTGA
AATGCCGGTTCATCTTGCTTTCAAGGCTCTCTGTCACGCCGATCGAAACAGAGATGGAAAGCTTGGCGAAGACGAGATCGATCAGTTCGTCAAGTACATGATGAGCCAAG
GTTATGTTGTCTGATTTTCTTTAATGCTCCGCCGCCTCCCACGACGGCTCACTGGCTCTATCGGTTGTTTGATCGTCGGTTTCTATAAACTTTTCGAATAAATGGCGGCT
GCGTGTTTATGTATATTTTTATTTTACTCGGTCGAGTTATACTTTGATTGATGGGTGTTATGTATAATTGTTCATCAATTCATTATGGTAATTCAAGTGTATGTATATAA
TTGTTTCTTGATTCATCACTCTTCTTTTTTGCATTTCGATACTAGTAATAGGACTTATTACTTTACTTGATAATTGTTTTTAATACCCTTTGTTAAATGATTTGTTAATT
TATTTTATGCATTTCACATTA
Protein sequenceShow/hide protein sequence
MKTKAKASENAYSAKELREIFSQMDTNEDGGLGLFEIKNALKRLDAEMPVHLAFKALCHADRNRDGKLGEDEIDQFVKYMMSQGYVV