; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G22150 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G22150
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCold regulated protein 27
Genome locationClcChr05:30497232..30499479
RNA-Seq ExpressionClc05G22150
SyntenyClc05G22150
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022935854.1 uncharacterized protein LOC111442637 isoform X1 [Cucurbita moschata]9.2e-10684.17Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ
        MELLP NLEN  AVETR+DSL+SE AKDESTEFALPVESSS GTHMTDS+PSDWTDEKHHLFLESME SFVSQMFD+ HSVGSCPRKENSS TKL GQSQ
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFE TESRSNLLND+QALS NPWIHHFRA RKNKNVACKSQ IGSGGRNL P  AAN+S P+  C+S+LS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDC-NGKRVKIPETNALINDQ
        +EVSDQNFVDEDRE   GSSDC N KRV  PETNALIN+Q
Subjt:  KEVSDQNFVDEDREAEKGSSDC-NGKRVKIPETNALINDQ

XP_022935855.1 uncharacterized protein LOC111442637 isoform X2 [Cucurbita moschata]4.1e-10683.88Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ
        MELLP NLEN  AVETR+DSL+SE AKDESTEFALPVESSS GTHMTDS+PSDWTDEKHHLFLESME SFVSQMFD+ HSVGSCPRKENSS TKL GQSQ
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFE TESRSNLLND+QALS NPWIHHFRA RKNKNVACKSQ IGSGGRNL P  AAN+S P+  C+S+LS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDC-NGKRVKIPETNALINDQVE
        +EVSDQNFVDEDRE   GSSDC N KRV  PETNALIN+Q E
Subjt:  KEVSDQNFVDEDREAEKGSSDC-NGKRVKIPETNALINDQVE

XP_038896198.1 cold-regulated protein 27 isoform X1 [Benincasa hispida]5.4e-11490Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ
        MELLPRNLENLKAVETRSDS+VSEFAKDESTEFALPV SSSQGTHMTDS+PSDWTDEKHHLFLESMEASFVSQMFD+ HSVGSCP KENSSR KLLGQSQ
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQ+IGS GRN  PF AANNSG M   +S+LSQQ+ISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQV
        KEVSDQNFVDE  EAEKGSSDCN KRVK P+TNALINDQV
Subjt:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQV

XP_038896199.1 cold-regulated protein 27 isoform X2 [Benincasa hispida]1.6e-11389.96Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ
        MELLPRNLENLKAVETRSDS+VSEFAKDESTEFALPV SSSQGTHMTDS+PSDWTDEKHHLFLESMEASFVSQMFD+ HSVGSCP KENSSR KLLGQSQ
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQ+IGS GRN  PF AANNSG M   +S+LSQQ+ISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQ
        KEVSDQNFVDE  EAEKGSSDCN KRVK P+TNALINDQ
Subjt:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQ

XP_038896200.1 cold-regulated protein 27 isoform X3 [Benincasa hispida]7.0e-11489.63Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ
        MELLPRNLENLKAVETRSDS+VSEFAKDESTEFALPV SSSQGTHMTDS+PSDWTDEKHHLFLESMEASFVSQMFD+ HSVGSCP KENSSR KLLGQSQ
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQ+IGS GRN  PF AANNSG M   +S+LSQQ+ISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQVE
        KEVSDQNFVDE  EAEKGSSDCN KRVK P+TNALINDQ E
Subjt:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQVE

TrEMBL top hitse value%identityAlignment
A0A0A0L0A2 Polyketide_cyc domain-containing protein3.3e-10178.93Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ
        MELLP NL++L   ETR+DSLVSEF KD+STEF+ P+ESSS+GTHMTDS+PSDWTDEKHHLFLESMEASFVSQMFD+ HSVGSCP K+NSSRTKLL +SQ
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN
        SASH HS FGQFKVLRRGSWKNINFEPTESRSN LN+YQALSHNPWIHHFRAARKNKNV CKSQ IGS GRN     AANNSGP+   +S+LSQQYIS+N
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQVEV
        KEVSDQNFVDE  E EKGS DCN KR    ETNALINDQ+ +
Subjt:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQVEV

A0A6J1F6L8 uncharacterized protein LOC111442637 isoform X14.4e-10684.17Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ
        MELLP NLEN  AVETR+DSL+SE AKDESTEFALPVESSS GTHMTDS+PSDWTDEKHHLFLESME SFVSQMFD+ HSVGSCPRKENSS TKL GQSQ
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFE TESRSNLLND+QALS NPWIHHFRA RKNKNVACKSQ IGSGGRNL P  AAN+S P+  C+S+LS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDC-NGKRVKIPETNALINDQ
        +EVSDQNFVDEDRE   GSSDC N KRV  PETNALIN+Q
Subjt:  KEVSDQNFVDEDREAEKGSSDC-NGKRVKIPETNALINDQ

A0A6J1FBV0 uncharacterized protein LOC111442637 isoform X22.0e-10683.88Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ
        MELLP NLEN  AVETR+DSL+SE AKDESTEFALPVESSS GTHMTDS+PSDWTDEKHHLFLESME SFVSQMFD+ HSVGSCPRKENSS TKL GQSQ
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFE TESRSNLLND+QALS NPWIHHFRA RKNKNVACKSQ IGSGGRNL P  AAN+S P+  C+S+LS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDC-NGKRVKIPETNALINDQVE
        +EVSDQNFVDEDRE   GSSDC N KRV  PETNALIN+Q E
Subjt:  KEVSDQNFVDEDREAEKGSSDC-NGKRVKIPETNALINDQVE

A0A6J1IFL9 uncharacterized protein LOC111476815 isoform X12.9e-10583.26Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ
        MELLP NLEN  AVETR+D L+SE  KD+STEFALPVESSS GTHMTDS+PSDWTDEKHHLFLESME SFVSQMFD+ HSVGSCPRKENSS TKL GQSQ
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN
        SASHVH+HFGQFKVLRRGSWKNINFE TESRSNLLND+QALS NPWIHHFRA RKNKNVACKSQ IGSGGRNL P  AANNS P+  C S+LS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQ
        +EVSDQNFVDEDRE   GSSDCN KRV  PETNALIN+Q
Subjt:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQ

A0A6J1IM11 uncharacterized protein LOC111476815 isoform X21.3e-10582.99Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ
        MELLP NLEN  AVETR+D L+SE  KD+STEFALPVESSS GTHMTDS+PSDWTDEKHHLFLESME SFVSQMFD+ HSVGSCPRKENSS TKL GQSQ
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN
        SASHVH+HFGQFKVLRRGSWKNINFE TESRSNLLND+QALS NPWIHHFRA RKNKNVACKSQ IGSGGRNL P  AANNS P+  C S+LS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQVE
        +EVSDQNFVDEDRE   GSSDCN KRV  PETNALIN+Q E
Subjt:  KEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQVE

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 274.2e-1332.29Show/hide
Query:  DESTEFALPVE---SSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNIN
        D+S++ A  VE   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+  + EN S +   G  +  S       QFKVL  G W+ IN
Subjt:  DESTEFALPVE---SSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNIN

Query:  FEPTESRSNLL---NDYQALSHNPWIHHFRAARKNKNVAC---KSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYIS-SNKEVSDQNFVDEDREAEK
         +  E R N     N ++ L  +PWI H++   K +       ++Q + S        ++ + S        +     IS    EVSDQNFV+E  + E 
Subjt:  FEPTESRSNLL---NDYQALSHNPWIHHFRAARKNKNVAC---KSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYIS-SNKEVSDQNFVDEDREAEK

Query:  GSSDCNGKRVKIPETNALINDQV
        GSS    K V + E+++   DQV
Subjt:  GSSDCNGKRVKIPETNALINDQV

Q8L983 Cold-regulated protein 282.8e-0423.5Show/hide
Query:  NLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVH
        +LE  + V   S    SE     S +  +  E+S           + WT+EKH+ +L+ +E+SFV Q++     +G     +  SRT+        S+ H
Subjt:  NLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVH

Query:  SHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSNKEVSDQ
            QF VL+ G W+ +NF   +S     ++++         H  + R     +  + T+G+                  T + ++     + + E S Q
Subjt:  SHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSNKEVSDQ

Query:  NFVDEDREAEKGSSDCNGKRVKIPETNALINDQV
        NF +E+ E EKG      +R    + ++L  DQV
Subjt:  NFVDEDREAEKGSSDCNGKRVKIPETNALINDQV

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)2.0e-0523.5Show/hide
Query:  NLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVH
        +LE  + V   S    SE     S +  +  E+S           + WT+EKH+ +L+ +E+SFV Q++     +G     +  SRT+        S+ H
Subjt:  NLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVH

Query:  SHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSNKEVSDQ
            QF VL+ G W+ +NF   +S     ++++         H  + R     +  + T+G+                  T + ++     + + E S Q
Subjt:  SHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSNKEVSDQ

Query:  NFVDEDREAEKGSSDCNGKRVKIPETNALINDQV
        NF +E+ E EKG      +R    + ++L  DQV
Subjt:  NFVDEDREAEKGSSDCNGKRVKIPETNALINDQV

AT4G33980.2 FUNCTIONS IN: molecular_function unknown2.0e-0523.5Show/hide
Query:  NLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVH
        +LE  + V   S    SE     S +  +  E+S           + WT+EKH+ +L+ +E+SFV Q++     +G     +  SRT+        S+ H
Subjt:  NLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVH

Query:  SHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSNKEVSDQ
            QF VL+ G W+ +NF   +S     ++++         H  + R     +  + T+G+                  T + ++     + + E S Q
Subjt:  SHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSNKEVSDQ

Query:  NFVDEDREAEKGSSDCNGKRVKIPETNALINDQV
        NF +E+ E EKG      +R    + ++L  DQV
Subjt:  NFVDEDREAEKGSSDCNGKRVKIPETNALINDQV

AT5G42900.1 cold regulated gene 273.0e-1432.29Show/hide
Query:  DESTEFALPVE---SSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNIN
        D+S++ A  VE   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+  + EN S +   G  +  S       QFKVL  G W+ IN
Subjt:  DESTEFALPVE---SSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNIN

Query:  FEPTESRSNLL---NDYQALSHNPWIHHFRAARKNKNVAC---KSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYIS-SNKEVSDQNFVDEDREAEK
         +  E R N     N ++ L  +PWI H++   K +       ++Q + S        ++ + S        +     IS    EVSDQNFV+E  + E 
Subjt:  FEPTESRSNLL---NDYQALSHNPWIHHFRAARKNKNVAC---KSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYIS-SNKEVSDQNFVDEDREAEK

Query:  GSSDCNGKRVKIPETNALINDQV
        GSS    K V + E+++   DQV
Subjt:  GSSDCNGKRVKIPETNALINDQV

AT5G42900.2 cold regulated gene 273.0e-1432.29Show/hide
Query:  DESTEFALPVE---SSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNIN
        D+S++ A  VE   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+  + EN S +   G  +  S       QFKVL  G W+ IN
Subjt:  DESTEFALPVE---SSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNIN

Query:  FEPTESRSNLL---NDYQALSHNPWIHHFRAARKNKNVAC---KSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYIS-SNKEVSDQNFVDEDREAEK
         +  E R N     N ++ L  +PWI H++   K +       ++Q + S        ++ + S        +     IS    EVSDQNFV+E  + E 
Subjt:  FEPTESRSNLL---NDYQALSHNPWIHHFRAARKNKNVAC---KSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYIS-SNKEVSDQNFVDEDREAEK

Query:  GSSDCNGKRVKIPETNALINDQV
        GSS    K V + E+++   DQV
Subjt:  GSSDCNGKRVKIPETNALINDQV

AT5G42900.3 cold regulated gene 271.2e-1532.43Show/hide
Query:  DESTEFALPVE---SSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNIN
        D+S++ A  VE   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+  + EN S +   G  +  S       QFKVL  G W+ IN
Subjt:  DESTEFALPVE---SSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNIN

Query:  FEPTESRSNLL---NDYQALSHNPWIHHFRAARKNKNVAC---KSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKG
         +  E R N     N ++ L  +PWI H++   K +       ++Q + S        ++ + S        +     IS  +EVSDQNFV+E  + E G
Subjt:  FEPTESRSNLL---NDYQALSHNPWIHHFRAARKNKNVAC---KSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKG

Query:  SSDCNGKRVKIPETNALINDQV
        SS    K V + E+++   DQV
Subjt:  SSDCNGKRVKIPETNALINDQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGTTACCTCGAAATTTGGAGAATCTCAAGGCCGTAGAAACTCGCTCCGACTCACTCGTCTCTGAATTCGCCAAGGACGAGTCGACCGAGTTTGCCCTCCCGGT
GGAATCTTCTAGCCAGGGCACTCATATGACGGATTCTTTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTTCTTGAATCCATGGAGGCATCGTTTGTCAGCCAAA
TGTTTGATACTGAGCATTCAGTTGGTTCCTGCCCCAGGAAGGAAAATTCTTCACGCACAAAATTGCTCGGCCAAAGCCAATCCGCCTCTCATGTCCATTCACATTTTGGC
CAGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCTACTGAATCTCGGTCGAACTTGTTGAATGATTACCAAGCTCTCTCACATAATCCTTGGAT
ACATCACTTTAGAGCTGCTCGTAAAAACAAGAATGTTGCGTGCAAAAGTCAAACTATCGGTTCAGGAGGAAGGAATTTGTCGCCATTCACAGCAGCTAATAATTCAGGAC
CTATGCATACTTGTGAGTCTAATTTGTCCCAGCAATATATCAGCAGTAATAAAGAAGTGTCAGATCAGAATTTTGTTGATGAAGATAGAGAAGCTGAAAAAGGAAGCAGT
GATTGCAATGGCAAAAGGGTCAAAATTCCAGAAACCAATGCTTTGATCAATGACCAGGTAGAAGTGATATCAACTTAA
mRNA sequenceShow/hide mRNA sequence
CCGCCTCTCTCTCTTTCTCTCTCCCTTCAATCTCTCTCCCACTGGCCCGCTTCCATCTTTCTTCCCTCTCTCTGTCGCCATTGCAAATCTGGAGATACTCCTTCATCCTC
TTCCCCATTCATGGAGTTGTTACCTCGAAATTTGGAGAATCTCAAGGCCGTAGAAACTCGCTCCGACTCACTCGTCTCTGAATTCGCCAAGGACGAGTCGACCGAGTTTG
CCCTCCCGGTGGAATCTTCTAGCCAGGGCACTCATATGACGGATTCTTTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTTCTTGAATCCATGGAGGCATCGTTT
GTCAGCCAAATGTTTGATACTGAGCATTCAGTTGGTTCCTGCCCCAGGAAGGAAAATTCTTCACGCACAAAATTGCTCGGCCAAAGCCAATCCGCCTCTCATGTCCATTC
ACATTTTGGCCAGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCTACTGAATCTCGGTCGAACTTGTTGAATGATTACCAAGCTCTCTCACATA
ATCCTTGGATACATCACTTTAGAGCTGCTCGTAAAAACAAGAATGTTGCGTGCAAAAGTCAAACTATCGGTTCAGGAGGAAGGAATTTGTCGCCATTCACAGCAGCTAAT
AATTCAGGACCTATGCATACTTGTGAGTCTAATTTGTCCCAGCAATATATCAGCAGTAATAAAGAAGTGTCAGATCAGAATTTTGTTGATGAAGATAGAGAAGCTGAAAA
AGGAAGCAGTGATTGCAATGGCAAAAGGGTCAAAATTCCAGAAACCAATGCTTTGATCAATGACCAGGTAGAAGTGATATCAACTTAACTACCATCTCTTGCTCCAAAAT
GATGATCACTGATTTCTTTAGGTTGTTCCTTAAGTTCCATGAAAGGAAGATGGTATTTTACAAGAATTCTATTACACAGCCAAAAGATAGATAGATCCCAGATTGTCACC
AAGACGTGTCGAAAGACTTATCGCTACTTCTCTAACTCGAGAAGGGTTATAGATGATCAGAGATTGCTGGTGAAGTCTATAAAGCTTATTTTGATGTTCTTGGGTTTGTC
TGATAATGTAAGTTCCAACACCTTTAGGTGTCTGCACTTACGTAGTAACTAGCTAATCAATAATTATGGTTTTGACTGGATAGATGTGTATGATATTTCATTCAGCATAT
GTATATATATATTTATTTCTTACAACAAGAAGAGCTTGAAATGAAATAGTAAGAAAATTTCAATTCTCTCCAATTGTTCGTAAGTTATTTGAACAAGATTTTTA
Protein sequenceShow/hide protein sequence
MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFG
QFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKGSS
DCNGKRVKIPETNALINDQVEVIST