CuGenDBv2

Gene ID	Clc05G23120
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	ATP synthase subunit d, mitochondrial
Genome location	ClcChr05:31181502..31183643
RNA-Seq Expression	Clc05G23120
Synteny	Clc05G23120
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0000274 - mitochondrial proton-transporting ATP synthase, stator stalk (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR008689 - ATP synthase, F0 complex, subunit D, mitochondrial IPR036228 - ATP synthase, F0 complex, subunit D superfamily, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142418.1 ATP synthase subunit d, mitochondrial [Cucumis sativus]

1.5e-83

96.43

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGT+KKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEI EVQEMKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022139222.1 ATP synthase subunit d, mitochondrial [Momordica charantia]

8.8e-84

95.83

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+VEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022966719.1 ATP synthase subunit d, mitochondrial [Cucurbita maxima]

1.5e-83

96.43

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_023541261.1 ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]

6.8e-84

97.02

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_038893313.1 ATP synthase subunit d, mitochondrial [Benincasa hispida]

2.0e-83

96.43

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGT+KKV +VAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE+KSLKESERLEKEIVEVQEMKKKISTMTADEYF KHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRL4 ATP synthase subunit d, mitochondrial

7.3e-84

96.43

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGT+KKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEI EVQEMKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A5D3CDC0 ATP synthase subunit d, mitochondrial

4.7e-83

95.83

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEEKSLKESERLEKEI EV+EMK+KI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1CDD8 ATP synthase subunit d, mitochondrial

4.3e-84

95.83

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+VEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1G072 ATP synthase subunit d, mitochondrial

2.1e-83

95.83

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1HUL8 ATP synthase subunit d, mitochondrial

7.3e-84

96.43

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

SwissProt top hits

e value

%identity

Alignment

Q9FT52 ATP synthase subunit d, mitochondrial

1.2e-75

82.74

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYD IEIPK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE+KSLKESERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

Arabidopsis top hits

e value

%identity

Alignment

AT3G52300.1 ATP synthase D chain, mitochondrial

8.5e-77

82.74

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYD IEIPK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE+KSLKESERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

AT3G52300.2 ATP synthase D chain, mitochondrial

7.0e-47

78.7

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYD IEIPK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLV
        PKFDAL++
Subjt:  PKFDALLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGCGGCACCGTTAAGAAAGTGGCCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTT
CTCGTCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAACCCTCCAGACTAAATTTAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCC
GCTTGGTGGACATGTACAAAGAGGCTTATGACGGCATTGAGATCCCCAAATTCGTAGACACAGTGACTCCACAGTACAAACCTAAATTTGATGCATTGCTGGTAGAATTG
AAGGAAGCTGAAGAAAAGTCTCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACTGCTGATGAATACTT
TGAGAAGCATCCTGAGTTGAGGAAGAAATTCGATGATGAAATCCGAAACGACTACTGGGGCTATTGA

mRNA sequence

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Protein sequence

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MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVEL
KEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

Clc05G23120 (gene) of Watermelon (cordophanus) v2 genome