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Clc05G23340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G23340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionFumarate reductase subunit C
Genome locationClcChr05:31421601..31423449
RNA-Seq ExpressionClc05G23340
SyntenyClc05G23340
Gene Ontology termsGO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR020164 - Cytochrome c oxidase assembly protein COX16


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446874.1 PREDICTED: uncharacterized protein LOC103489460 isoform X1 [Cucumis melo]2.6e-5676.4Show/hide
Query:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK
        MTSTEAGMG+STEPKK I+SA+N ARASPSMFRRWGR HPFIRYGLPMISLTVLGAVGLGHLLQG                             SKDIAK
Subjt:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK

Query:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        VKDDQEWEITEMR+ALSRTGPIDAYKPKNISLEEELRALQE+VDINNYEYKRIP+PTDRTS
Subjt:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS

XP_022956367.1 uncharacterized protein LOC111458129 [Cucurbita moschata]8.8e-5777.64Show/hide
Query:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK
        MTSTEAGMGQSTE KK + SANN AR+SPSMFRRWGR HPFIRYGLPMISLTVLGAVGLGHLLQG                             SKDIAK
Subjt:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK

Query:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
Subjt:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS

XP_022969704.1 uncharacterized protein LOC111468648 [Cucurbita maxima]2.6e-5677.02Show/hide
Query:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK
        MTSTEAG+GQSTE KK + SANN AR+SPSMFRRWGR HPFIRYGLPMISLTVLGAVGLGHLLQG                             SKDIAK
Subjt:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK

Query:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
Subjt:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS

XP_023533207.1 uncharacterized protein LOC111795161 [Cucurbita pepo subsp. pepo]2.0e-5677.02Show/hide
Query:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK
        MTSTEAGMGQSTE KK + SANN AR+SPSMF+RWGR HPFIRYGLPMISLTVLGAVGLGHLLQG                             SKDIAK
Subjt:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK

Query:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
Subjt:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS

XP_038891357.1 uncharacterized protein LOC120080793 isoform X2 [Benincasa hispida]1.1e-5677.02Show/hide
Query:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK
        MTSTEAG+GQSTEPKK IAS NN  RASPSMFRRWGR HPFIRYGLPMISLTVLGAVGLGHLLQG                             SKDIAK
Subjt:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK

Query:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        V+DDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTD+TS
Subjt:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS

TrEMBL top hitse value%identityAlignment
A0A1S4DWC3 uncharacterized protein LOC103489460 isoform X11.2e-5676.4Show/hide
Query:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK
        MTSTEAGMG+STEPKK I+SA+N ARASPSMFRRWGR HPFIRYGLPMISLTVLGAVGLGHLLQG                             SKDIAK
Subjt:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK

Query:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        VKDDQEWEITEMR+ALSRTGPIDAYKPKNISLEEELRALQE+VDINNYEYKRIP+PTDRTS
Subjt:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS

A0A5A7SXX4 Cytochrome c oxidase assembly protein cox166.8e-4767.72Show/hide
Query:  TEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAKVKD
        TEAGMG+STEPKK I+SA+N ARASPSMFRRWGR HPFIRYGLPMISLTVLGAVGLGHLLQG                             SKDIAKVKD
Subjt:  TEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAKVKD

Query:  DQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        DQEWEITEMR+ALSRTGPIDA+   ++ + ++ +ALQE+VDINNYEYKRIP+PTDRTS
Subjt:  DQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS

A0A6J1CBH5 uncharacterized protein LOC1110100644.1e-5272.67Show/hide
Query:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK
        MTS E GM QS EP K I+SA N ARASPSMFRRWGR HPFIRYGLPMISLTVLGAVGLGHLLQG                             SKDIAK
Subjt:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK

Query:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        VKDDQEWEITEMRKALSRTGP+DAYKPKNISLEEELRALQEKV+IN+YEYKRIPKP+ RTS
Subjt:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS

A0A6J1GWL5 uncharacterized protein LOC1114581294.3e-5777.64Show/hide
Query:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK
        MTSTEAGMGQSTE KK + SANN AR+SPSMFRRWGR HPFIRYGLPMISLTVLGAVGLGHLLQG                             SKDIAK
Subjt:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK

Query:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
Subjt:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS

A0A6J1HX89 uncharacterized protein LOC1114686481.2e-5677.02Show/hide
Query:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK
        MTSTEAG+GQSTE KK + SANN AR+SPSMFRRWGR HPFIRYGLPMISLTVLGAVGLGHLLQG                             SKDIAK
Subjt:  MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAK

Query:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
Subjt:  VKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14145.1 unknown protein1.8e-3953.7Show/hide
Query:  MTSTEAGM-GQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIA
        MT+ E G   Q + P     +     + S + F+RWGR HPF+RYGLPMISLTV GA+GLG LLQG                             SKDIA
Subjt:  MTSTEAGM-GQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIA

Query:  KVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        KVKDDQEWEI E RKALSRTGP+DAYKPKN S+E+EL+A+QEKVDIN YEYK+IPK  +  S
Subjt:  KVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGCACTGAGGCAGGAATGGGTCAGTCTACAGAACCAAAGAAGAGGATTGCCTCTGCCAACAATGTAGCTCGGGCATCTCCATCCATGTTTAGAAGATGGGGCAG
AAGTCACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACTGTGCTTGGGGCAGTTGGTCTTGGTCATCTCTTGCAAGGAAGGTTAGTGGTTGCTAGTACTGACG
TGGGAAAGGGTCTGGACTTTGCCTTGGAAGTGTTCATTGAATCCATGGGATTGAGATTTTTCAGTAAAGATATTGCAAAGGTAAAAGATGATCAAGAATGGGAGATTACT
GAGATGAGAAAGGCCCTATCAAGAACAGGACCTATTGATGCATATAAGCCGAAAAATATATCTTTAGAAGAAGAACTGAGGGCTTTACAAGAGAAGGTAGACATTAACAA
CTACGAGTACAAGAGAATTCCCAAGCCTACTGATCGAACATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCAGCACTGAGGCAGGAATGGGTCAGTCTACAGAACCAAAGAAGAGGATTGCCTCTGCCAACAATGTAGCTCGGGCATCTCCATCCATGTTTAGAAGATGGGGCAG
AAGTCACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACTGTGCTTGGGGCAGTTGGTCTTGGTCATCTCTTGCAAGGAAGGTTAGTGGTTGCTAGTACTGACG
TGGGAAAGGGTCTGGACTTTGCCTTGGAAGTGTTCATTGAATCCATGGGATTGAGATTTTTCAGTAAAGATATTGCAAAGGTAAAAGATGATCAAGAATGGGAGATTACT
GAGATGAGAAAGGCCCTATCAAGAACAGGACCTATTGATGCATATAAGCCGAAAAATATATCTTTAGAAGAAGAACTGAGGGCTTTACAAGAGAAGGTAGACATTAACAA
CTACGAGTACAAGAGAATTCCCAAGCCTACTGATCGAACATCTTAAAATTTTGCCCTCCAATTGCATACAAAACTTGCTCAGGTATTTTGTTTCCTCACTTGTGATGCAA
CCTAGATTTAATTTTGTAAGAGAATATTTGTAATCAATGCCAAGCTAGTAATTCCTTTTGAAAATTATGCCACTAAACACCCTTTCAGATCAGTAGAATGTTCATTTTTA
AA
Protein sequenceShow/hide protein sequence
MTSTEAGMGQSTEPKKRIASANNVARASPSMFRRWGRSHPFIRYGLPMISLTVLGAVGLGHLLQGRLVVASTDVGKGLDFALEVFIESMGLRFFSKDIAKVKDDQEWEIT
EMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDRTS