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Clc05G23700 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G23700
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationClcChr05:31713192..31714167
RNA-Seq ExpressionClc05G23700
SyntenyClc05G23700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601193.1 hypothetical protein SDJN03_06426, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4588.57Show/hide
Query:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGP---SGGGGGGGGGGG
        MAT   +GL LLVLLM D TLAARF RGYGGGGGGGSGGGGGGGEGS PWSGSGYGSGYGSGYGSGYGD GY R+GDE YGPYGP    GGGGGGGGGGG
Subjt:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGP---SGGGGGGGGGGG

Query:  GGGGANGAGYGRGFGSGSGSGYGSGGGAGR--GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGS
        GGGGANGAGYG GFGSGSGSGYGSGGG GR  GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYG+GGGRGGGGGGGGGGGGGGGGG GMG GSGYGS
Subjt:  GGGGANGAGYGRGFGSGSGSGYGSGGGAGR--GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGS

Query:  GYGSGYGGGG
        GYGSGYGGGG
Subjt:  GYGSGYGGGG

XP_008447018.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]3.8e-4486.45Show/hide
Query:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGS-GPWSGSGYGSGYGSGYGSGY-GDEGYTRFGDEGYGPYG--PSGGGGGGGGGG
        MAT +AVG  +LVLLM+D  LAARFFRGYGGGGGGGSGGGGGGGEGS GPW GSGYGSGYGSGYGSGY G+EGY+R+GDEGYGPYG    GGGGGGGGGG
Subjt:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGS-GPWSGSGYGSGYGSGYGSGY-GDEGYTRFGDEGYGPYG--PSGGGGGGGGGG

Query:  GGGGGANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSG
        GGGG A GA YGRGFG G GSGYGSGGG GRGGGGGGG GGGGGGGSG+GSGSGYGSGYGSGGGYGSGGGRGGGGG GGGGGGGGGGGGGMG GSGYGSG
Subjt:  GGGGGANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSG

Query:  YGSGYGGGGGEESP
        YGSGYGGGG EESP
Subjt:  YGSGYGGGGGEESP

XP_022990525.1 putative glycine-rich cell wall structural protein 1 [Cucurbita maxima]2.2e-4790.34Show/hide
Query:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGPSGGGGGGGGGGGGGG
        MAT  A+GL LLVLLM D TLAARF RGYGGGGGGGSGGGGGGGEGS PWSGSGYGSGYGSGYGSGYGD GY R+GDEGYGPYG  GGGGGGGGGGGGGG
Subjt:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGPSGGGGGGGGGGGGGG

Query:  GANGAGYGRGFGSGSGSGYGSGGGAGR--GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSGYG
         ANGAGYG+GFGSGSGSGYGSGGG GR  GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGG GMG GSGYGSGYG
Subjt:  GANGAGYGRGFGSGSGSGYGSGGGAGR--GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSGYG

Query:  SGYGGGG
        SGYGGGG
Subjt:  SGYGGGG

XP_023550088.1 glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo]2.5e-4385.98Show/hide
Query:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGP-------SGGGGGGG
        MAT  A+GL LLVLLM D TLAARF RGY    GGGSGGGGGGGEGS PWSGSGYGSGYGSGYGSGYGD GY R+GDEGYGPYGP        GGGGGGG
Subjt:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGP-------SGGGGGGG

Query:  GGGGGGGGANGAGYGRGFGSGSGSGYGSGGGAGR--GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGS
        GGGGGGGGANGAGYG GFGSGSGSGYGSGGG GR  GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYG+GGGRGGGGGGGGGGGGGGGGG GMG GS
Subjt:  GGGGGGGGANGAGYGRGFGSGSGSGYGSGGGAGR--GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGS

Query:  GYGSGYGSGYGGGG
        GYGSGYGSGYGGGG
Subjt:  GYGSGYGSGYGGGG

XP_031741764.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]2.3e-4184.11Show/hide
Query:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGY-GDEGYTRFGDEG-YGPYGP--SGGGGGGGGGG
        MAT +A GL +LVLLM+D  LAARFFRGY    GGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGY G+EGY+R+GDEG YGPYGP   GGGGGGGGGG
Subjt:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGY-GDEGYTRFGDEG-YGPYGP--SGGGGGGGGGG

Query:  GGGGGANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSG
        GGGG A GA YGRGFG+GSGSGYGSGGG GRGGGGGGG GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGG       GSGYGSG
Subjt:  GGGGGANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSG

Query:  YGSGYGGGGGEESP
        YGSGYGGGG EESP
Subjt:  YGSGYGGGGGEESP

TrEMBL top hitse value%identityAlignment
A0A0A0KUV7 Uncharacterized protein2.5e-4183.18Show/hide
Query:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGY-GDEGYTRFGDEG-YGPYGP--SGGGGGGGGGG
        MAT +A GL +LVLLM+D  LAARFFRGY    GGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGY G+EGY+R+GDEG YGPYGP   GGGGGGGGGG
Subjt:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGY-GDEGYTRFGDEG-YGPYGP--SGGGGGGGGGG

Query:  GGGGGANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSG
        GGGG A GA YGRGFG+GSGSGYGSGGG GRGGGGGGG GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGG         GSGYGSG
Subjt:  GGGGGANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSG

Query:  YGSGYGGGGGEESP
        YGSGYGGGG EESP
Subjt:  YGSGYGGGGGEESP

A0A1R3IXG4 Uncharacterized protein1.5e-1769.86Show/hide
Query:  MATPRAVGLALLVLLMVDFTLAARFFRGY----GGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGPSGGGGGGGGGG
        M + R +G A LVLL VD   AAR F+G     GGGGGGGSGGGGGGG   G  SGSGYGSGYGSG GSGYG               G SGGGGGGGGGG
Subjt:  MATPRAVGLALLVLLMVDFTLAARFFRGY----GGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGPSGGGGGGGGGG

Query:  GGGGGANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGRGGGGGGGSGIGS--GSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGG---GMGEGS
        GGGGG   +G G G+GSGSGSGYGSGGG G GGGGGGGRGGGGGGG G GS  GSGYGSGYGSG GYGSGGG+GGGGGGGGGGGGGGGGGG   G G GS
Subjt:  GGGGGANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGRGGGGGGGSGIGS--GSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGG---GMGEGS

Query:  GY--GSGYGSGYGGGGGEE
        GY  GSGYGSGYG GG ++
Subjt:  GY--GSGYGSGYGGGGGEE

A0A1S3BGF1 glycine-rich cell wall structural protein 2-like1.9e-4486.45Show/hide
Query:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGS-GPWSGSGYGSGYGSGYGSGY-GDEGYTRFGDEGYGPYG--PSGGGGGGGGGG
        MAT +AVG  +LVLLM+D  LAARFFRGYGGGGGGGSGGGGGGGEGS GPW GSGYGSGYGSGYGSGY G+EGY+R+GDEGYGPYG    GGGGGGGGGG
Subjt:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGS-GPWSGSGYGSGYGSGYGSGY-GDEGYTRFGDEGYGPYG--PSGGGGGGGGGG

Query:  GGGGGANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSG
        GGGG A GA YGRGFG G GSGYGSGGG GRGGGGGGG GGGGGGGSG+GSGSGYGSGYGSGGGYGSGGGRGGGGG GGGGGGGGGGGGGMG GSGYGSG
Subjt:  GGGGGANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSG

Query:  YGSGYGGGGGEESP
        YGSGYGGGG EESP
Subjt:  YGSGYGGGGGEESP

A0A5E4EXV8 PREDICTED: glycine-rich cell wall structural 21.6e-1669.95Show/hide
Query:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGPSGGGGGGGGGGGGGG
        MA+ + +G A LVLL+V+ + AAR  +   GG G G GGGGGGGEG G  S +G GSGYGSG+G G G          GYG  G  GGG GGGGGGGGG 
Subjt:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGPSGGGGGGGGGGGGGG

Query:  GANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGR--GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGG---GMGEGSGYGS
        GANG G G G+GSGSGSGYGSGGG G GGGGGGG+  GGGGGGGSG GSGSGYGSGYGSG GYGSGGG+GGGGGGGGGGGGGGGGGG   G G GSGYGS
Subjt:  GANGAGYGRGFGSGSGSGYGSGGGAGRGGGGGGGR--GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGG---GMGEGSGYGS

Query:  GYGSGYGGGGGEE
        GYGSGYGGGGGE+
Subjt:  GYGSGYGGGGGEE

A0A6J1JQB8 putative glycine-rich cell wall structural protein 11.1e-4790.34Show/hide
Query:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGPSGGGGGGGGGGGGGG
        MAT  A+GL LLVLLM D TLAARF RGYGGGGGGGSGGGGGGGEGS PWSGSGYGSGYGSGYGSGYGD GY R+GDEGYGPYG  GGGGGGGGGGGGGG
Subjt:  MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGPSGGGGGGGGGGGGGG

Query:  GANGAGYGRGFGSGSGSGYGSGGGAGR--GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSGYG
         ANGAGYG+GFGSGSGSGYGSGGG GR  GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGG GMG GSGYGSGYG
Subjt:  GANGAGYGRGFGSGSGSGYGSGGGAGR--GGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSGYG

Query:  SGYGGGG
        SGYGGGG
Subjt:  SGYGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCCCCAGGGCGGTTGGTTTGGCGCTCTTGGTTTTGTTGATGGTGGACTTCACTCTTGCAGCTAGATTCTTCAGGGGCTATGGAGGTGGTGGCGGAGGTGGTAG
TGGTGGCGGTGGAGGTGGCGGAGAAGGTTCAGGACCTTGGTCGGGTTCGGGATATGGTTCGGGGTATGGCTCTGGGTATGGTTCGGGGTATGGCGATGAAGGCTATACTA
GATTTGGAGATGAAGGCTATGGACCATATGGGCCATCTGGGGGTGGTGGAGGTGGAGGTGGAGGAGGAGGAGGTGGTGGCGGCGCAAATGGAGCTGGGTATGGTCGTGGG
TTTGGATCGGGAAGTGGGTCAGGGTACGGGTCTGGTGGTGGAGCAGGACGTGGCGGAGGGGGCGGCGGTGGCAGAGGTGGAGGAGGAGGTGGAGGCTCAGGAATTGGAAG
TGGGTCCGGATATGGCTCGGGATATGGAAGTGGGGGAGGGTATGGAAGTGGTGGAGGTAGAGGTGGCGGCGGAGGTGGTGGAGGAGGTGGCGGCGGCGGAGGCGGTGGTG
GAGGAGGGATGGGCGAAGGGTCTGGGTATGGTTCTGGATATGGGTCAGGATATGGAGGAGGTGGGGGTGAAGAATCACCATGA
mRNA sequenceShow/hide mRNA sequence
CAAAAACCAACCCTTTTCTTTCAATGCATTACAACTTTACGTAAAACATCCCAAAACTACTTCCTTCTCCTCATATTCTCAAATAAAAACAAAAACAACTTGCCTACGTC
CAAGCTTTGATTTTCTATATACATTGTTACTTATCATCATCAATGGCTACCCCCAGGGCGGTTGGTTTGGCGCTCTTGGTTTTGTTGATGGTGGACTTCACTCTTGCAGC
TAGATTCTTCAGGGGCTATGGAGGTGGTGGCGGAGGTGGTAGTGGTGGCGGTGGAGGTGGCGGAGAAGGTTCAGGACCTTGGTCGGGTTCGGGATATGGTTCGGGGTATG
GCTCTGGGTATGGTTCGGGGTATGGCGATGAAGGCTATACTAGATTTGGAGATGAAGGCTATGGACCATATGGGCCATCTGGGGGTGGTGGAGGTGGAGGTGGAGGAGGA
GGAGGTGGTGGCGGCGCAAATGGAGCTGGGTATGGTCGTGGGTTTGGATCGGGAAGTGGGTCAGGGTACGGGTCTGGTGGTGGAGCAGGACGTGGCGGAGGGGGCGGCGG
TGGCAGAGGTGGAGGAGGAGGTGGAGGCTCAGGAATTGGAAGTGGGTCCGGATATGGCTCGGGATATGGAAGTGGGGGAGGGTATGGAAGTGGTGGAGGTAGAGGTGGCG
GCGGAGGTGGTGGAGGAGGTGGCGGCGGCGGAGGCGGTGGTGGAGGAGGGATGGGCGAAGGGTCTGGGTATGGTTCTGGATATGGGTCAGGATATGGAGGAGGTGGGGGT
GAAGAATCACCATGAATATAATTTGAAGATACCTAGAAATGAATTTATCTTTGAAAGCATTTGAAATAAAGTGTAATGGCAACTTCTACTTAGAAAGATGATATTAAAAT
TTGCTGTATTGCTTCCAATCATTACCAAAATCCTCTTCCTTCTAAATGAATAAATTGCTCTTGACCTTTTAATACAATTTGATGAATTATATTCTC
Protein sequenceShow/hide protein sequence
MATPRAVGLALLVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDEGYTRFGDEGYGPYGPSGGGGGGGGGGGGGGGANGAGYGRG
FGSGSGSGYGSGGGAGRGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGEGSGYGSGYGSGYGGGGGEESP