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Clc05G24810 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G24810
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box domain-containing protein
Genome locationClcChr05:32677773..32684618
RNA-Seq ExpressionClc05G24810
SyntenyClc05G24810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034579.1 hypothetical protein E6C27_scaffold65G005950 [Cucumis melo var. makuwa]2.9e-0458.82Show/hide
Query:  QTRIEFSGGRVAALPPPPSPAQAKILPSAILDFSQWILIQRPPLMIFSSRE
        +TRIEFSGG VAA+ PPPS A AK   S I+D S  ILIQ PPL+   +R+
Subjt:  QTRIEFSGGRVAALPPPPSPAQAKILPSAILDFSQWILIQRPPLMIFSSRE
TrEMBL top hitse value%identityAlignment
A0A0A0KT87 F-box domain-containing protein9.2e-0457.69Show/hide
Query:  GQTRIEFSGGRVAALPPPPSPAQAKILPSAILDFSQWILIQRPPLMIFSSRE
        G+TRIE SG  VAA+ PPPS A AK   S I+DFS  ILIQ  PL+ F + E
Subjt:  GQTRIEFSGGRVAALPPPPSPAQAKILPSAILDFSQWILIQRPPLMIFSSRE
A0A5D3CBC5 Uncharacterized protein1.4e-0458.82Show/hide
Query:  QTRIEFSGGRVAALPPPPSPAQAKILPSAILDFSQWILIQRPPLMIFSSRE
        +TRIEFSGG VAA+ PPPS A AK   S I+D S  ILIQ PPL+   +R+
Subjt:  QTRIEFSGGRVAALPPPPSPAQAKILPSAILDFSQWILIQRPPLMIFSSRE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGAAGATGAAGATGGAGAGATTTGAGAACATCTGGGATTGGAAGAAAAGAAGAAAAGACAGAATTTTGAGGGGAAACAGAGAGAAAGTTAATGGTCAGACAAG
AATCGAGTTCAGCGGGGGCCGAGTTGCGGCGCTTCCTCCGCCTCCAAGTCCTGCTCAAGCAAAAATCTTGCCCTCAGCGATCCTCGATTTCTCTCAGTGGATTCTGATTC
AACGGCCACCCCTCATGATATTTTCTTCTCGCGAGGCCACTTCCTTTGCCCCAAATCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGAAGATGAAGATGGAGAGATTTGAGAACATCTGGGATTGGAAGAAAAGAAGAAAAGACAGAATTTTGAGGGGAAACAGAGAGAAAGTTAATGGTCAGACAAG
AATCGAGTTCAGCGGGGGCCGAGTTGCGGCGCTTCCTCCGCCTCCAAGTCCTGCTCAAGCAAAAATCTTGCCCTCAGCGATCCTCGATTTCTCTCAGTGGATTCTGATTC
AACGGCCACCCCTCATGATATTTTCTTCTCGCGAGGCCACTTCCTTTGCCCCAAATCCTTAGAAATTAAGGGGCACGTAGTGTTATTGATGGCCACAACGTCTTGCATTT
ATGACCTTTTCGTTTACCTTCTGCTCATTTGGAAGGAACCCGTGTATTGAATTTTATTGACGAATATAGACTTGGAGTCTTGATGTTGGAAAATGTCGAAGAGTAAAAGG
AGGAATCAAAGGCAGAGGAAAAAACGAAAGTTAAAAGATGGAAGGGGAAACTCTATTATGGATTGGGCAGGGCTCCCCCGTGATATTCTTGTCATGATCTTTGAGCAGTT
GTCTCTTGTGGATTGTATGTCAGTCGATAATGTTTGTAAGCTGTGGAGCAATATCCTTGCTGAACTTCCAAATTGGAAGCGGGGTGGATTTCCATGGCTTTTGATGTCAG
GTCAAAAAGATAGAGAGATGAGAACTTGTTCTTGCATTCTAGACAATCGAATTTGGGAAATGGAGCTTCTTGAGGCATATGGAGCTTATGTTTGGGGATCTTTTCAGGAC
TGGCTAATAATAGTGAAGGATCTTGGTTGTTATTCTCTTGAAGTTAGTTTGTTGAACCCCTTCTCTGTAAGGAAGATTAACCTGCCAAGGCTTTGGAACTTCTATCATAA
GATGGTTCTTTCAGGATCTCCCACTGAGGAAAACACAATTTGTGCAGCCATTCATAGTCAGAATCGCGAAATTGCCTTTTGGTTTCAAGGGTCAGAAGTATGGCACAAGT
ATAAACTTGAAGGTACGCCTTTTGAAGATGCTGTGTTCTGTAATGGAAGTCTTTTTCTTCTCTGTAATGACGGTAATATATTCCAAATCGAAGCAACAAGTATCATCTCA
AATATTAGAGAGAATGAATGTGTTGTATCTATTTCTGAGATCGAAGCACAGTTCCATGAACTTAGAAGCCTGGAAATAAACAGTCAACATGTGTTGAAGTATCTTGTGGA
GTCCTCAGGGGATGTTTTGCTGGTCTGTAGGTATTTCAGCAAGAAACCTGATGCTGTACTTGAAACAATAAACTTTGAGATATATTCACTTGATCTTTCTCAGATGTCAT
GGGAAAAGGTCGAGTGTTTGGATGATCGGATTCTGTTTTTAGGTAAATGTTGTTCTAGGTCTCTTTCTTCAACTGAACTCGGGATTGCGATCAGTAACTGTATCTACTTC
TCCAATGATGATATTGCTCCTTGGTGGAATGAATGGGATTCTAATCATCTGAAAGGATTATCTTCGCTTTTTGGACTTGACAACTCCTCGAGAAAAGATTGGGGAACCTT
TCACATCGACAGAGACAACAATGGAAAGTTTTGTTTCCGTGGTAACCGTGACAATTGGGCGCCCATCTGGTTCACTGCACCTCTATGGTGGTATAGCAAGAACATTGCTA
GACAGTCAAATCGATATCGACAAATGTGATGAAACTTATCATGATTCGTGATAGAAAGCAGAAATCTAAAAATATCTAGTACCGGGTTTAAGTGCTTGAGATGGTTGGCA
ATGAAATAGACTGAAGTTTTTGATAGTGTCAAGTGATACAGAATGTAAACGCCTTGCATGTAACTTGTACAAGCTTCAAAAGCAGCGTATAGAATTGCGTAGGATTAGTA
CTTCTCTTTTGTATATGCTCTTATTTTGTCTATATTTATATGGTAATGTTCAGGATAATGTTTGCTCACTGTTGAAATAGCAGAGTCCTGGCTGTCCGTTTGAATGTTCC
TGGAATGAACTTGTTGGGAAA
Protein sequenceShow/hide protein sequence
MKMKMKMERFENIWDWKKRRKDRILRGNREKVNGQTRIEFSGGRVAALPPPPSPAQAKILPSAILDFSQWILIQRPPLMIFSSREATSFAPNP