; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G24980 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G24980
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibulose bisphosphate carboxylase small subunit
Genome locationClcChr05:32812670..32813897
RNA-Seq ExpressionClc05G24980
SyntenyClc05G24980
Gene Ontology termsGO:0009853 - photorespiration (biological process)
GO:0019253 - reductive pentose-phosphate cycle (biological process)
GO:0009507 - chloroplast (cellular component)
InterPro domainsIPR000894 - Ribulose bisphosphate carboxylase small subunit, domain
IPR024680 - Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal
IPR024681 - Ribulose bisphosphate carboxylase, small subunit
IPR036385 - Ribulose bisphosphate carboxylase, small subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
HAP2066367.1 hypothetical protein [Escherichia coli]2.1e-9187.36Show/hide
Query:  SSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCLEF
        SSI+SSAAVASVN ASPAQASMVAPFTGLKS AAFP+TRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPD+   QL KEV+YLLRKGW+PC+EF
Subjt:  SSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCLEF

Query:  DVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS
        D+H GFVYRENHRSPGYYDGRYWTMWKLPMFGCTD++QV+ EIEEAKK YPDA+IRVIGFDNVRQVQCISFI YKPP+FY+S
Subjt:  DVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS

WP_064723948.1 ribulose-1,5-bisphosphate carboxylase small subunit, partial [Paenarthrobacter nicotinovorans]3.1e-98100Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL
        MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL

Query:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKP
        EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKP
Subjt:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKP

WP_082711130.1 MULTISPECIES: ribulose-1,5-bisphosphate carboxylase small subunit [Bacteria]3.5e-102100Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL
        MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL

Query:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS
        EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS
Subjt:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS

WP_082918361.1 ribulose-1,5-bisphosphate carboxylase small subunit [Pseudoalteromonas sp. MQS005]2.5e-9287.5Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL
        MASSI+SSAAVASVN ASPAQASMVAPFTGLKS AAFP+TRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPD+   QL KEV+YLLRKGW+PC+
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL

Query:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS
        EFD+H GFVYRENHRSPGYYDGRYWTMWKLPMFGCTD++QV+ EIEEAKK YPDA+IRVIGFDNVRQVQCISFI YKPP+FY+S
Subjt:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS

XP_038892640.1 ribulose bisphosphate carboxylase small chain, chloroplastic-like [Benincasa hispida]1.8e-9896.2Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL
        MASSIVSSAAVASVNRASPAQASMVAPFTGLKS AAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLD+ QLAKEVEYLLRKGWVPCL
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL

Query:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS
        EFD+HDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVI+EI EAKK YPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS
Subjt:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS

TrEMBL top hitse value%identityAlignment
A0A0A0KR46 Ribulose bisphosphate carboxylase small subunit2.2e-8987.03Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC
        MASSI+SSAAVASVN ASPAQASMVAPFTGLKS A FPITRKNN DITTLASNGG+VQCMKVWPPLGL+KFETLSYLPD+   QL+KE +YLLR GWVPC
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC

Query:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS
        +EFD+  GFVYRENHRSPGYYDGRYWTMWKLPMFGCTD++QVIQEIEEAKK YPDAFIRVIGFDNVRQVQCISFI YKPP+FYSS
Subjt:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS

A0A1S3BG44 Ribulose bisphosphate carboxylase small subunit1.2e-9287.5Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL
        MASSI+SSAAVASVN ASPAQASMVAPFTGLKS AAFP+TRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPD+   QL KEV+YLLRKGW+PC+
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL

Query:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS
        EFD+H GFVYRENHRSPGYYDGRYWTMWKLPMFGCTD++QV+ EIEEAKK YPDA+IRVIGFDNVRQVQCISFI YKPP+FY+S
Subjt:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS

A0A5D3CCQ3 Ribulose bisphosphate carboxylase small subunit1.2e-9287.5Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL
        MASSI+SSAAVASVN ASPAQASMVAPFTGLKS AAFP+TRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPD+   QL KEV+YLLRKGW+PC+
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL

Query:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS
        EFD+H GFVYRENHRSPGYYDGRYWTMWKLPMFGCTD++QV+ EIEEAKK YPDA+IRVIGFDNVRQVQCISFI YKPP+FY+S
Subjt:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS

A0A5P8U3Q4 Ribulose bisphosphate carboxylase small subunit2.2e-8987.03Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC
        MASSI+SSAAVASVN ASPAQASMVAPFTGLKS A FPITRKNN DITTLASNGG+VQCMKVWPPLGL+KFETLSYLPD+   QL+KE +YLLR GWVPC
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC

Query:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS
        +EFD+  GFVYRENHRSPGYYDGRYWTMWKLPMFGCTD++QVIQEIEEAKK YPDAFIRVIGFDNVRQVQCISFI YKPP+FYSS
Subjt:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS

H8WR56 Ribulose bisphosphate carboxylase small subunit6.3e-8986.49Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC
        MASSI+SSA VASVN ASPAQASMVAPFTGLKS A FPITRKNN DITTLASNGG+VQCMKVWPPLGL+KFETLSYLPD+   QL+KE +YLLR GWVPC
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC

Query:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS
        +EFD+  GFVYRENHRSPGYYDGRYWTMWKLPMFGCTD++QVIQEIEEAKK YPDAFIRVIGFDNVRQVQCISFI YKPP+FYSS
Subjt:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS

SwissProt top hitse value%identityAlignment
P00865 Ribulose bisphosphate carboxylase small subunit, chloroplastic 12.6e-7976.24Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL
        MASS++SS AV +VNRA    A MVAPFTGLKS A FP  + NNDIT++ASNGGRVQCM+VWPP+G KKFETLSYLPDLD  QLAKEVEYLLRKGW+PCL
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL

Query:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF
        EF++  GFVYRE++RSP YYDGRYWTMWKLPMFGCTDA+QV++E++EAK  YP+ FIR+IGFDNVRQVQCISFI YKPP F
Subjt:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF

P08474 Ribulose bisphosphate carboxylase small subunit, chloroplastic3.3e-8786.03Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC
        MASSI+SSAAVASVN ASPAQASMVAPFTGLKS A FPITRKNN DITTLASN G+VQCMKVWPPLGL+KFETLSYLPD+   QL+KE +YLLR GWVPC
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNN-DITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC

Query:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKP
        +EFD+  GFVYRENHRSPG+YDGRYWTMWKLPMFGCTD++QVIQEIEEAKK YPDAFIRVIGFDNVRQVQCISFI YKP
Subjt:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKP

P16032 Ribulose bisphosphate carboxylase small subunit, chloroplastic 14.4e-7976.8Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL
        MASS+VSSAAVA+VNR +PAQASMVAPF GLKS AAFP+T+KNNDIT++A+NGGRVQCM+VWPPLG KKFETLSYLP L +  L KEV+YLL  GWVPCL
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCL

Query:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF
        EF+   GFVYRE+  +PGYYDGRYWTMWKLPMFGCTD +QV+ E+EEAKK YP+AFIR+IGFDNVRQVQCISFI YKP  +
Subjt:  EFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF

P24007 Ribulose bisphosphate carboxylase small subunit, chloroplastic2.1e-8177.05Show/hide
Query:  MASSIVSSAAVASV--NRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVP
        MASS++SS  VA+V  +R +PAQA MVAPF GLKS +AFP+TRK+NDIT++ASNGGRVQCM+VWPPLGLKKFETLSYLP L    LAKEV+YLLRK WVP
Subjt:  MASSIVSSAAVASV--NRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVP

Query:  CLEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF
        CLEF++  GFVYRENHRSPGYYDGRYWTMWKLPMFGCTD++QV++E+EEAKK YP +FIR+IGFDNVRQVQCISFI YKP  F
Subjt:  CLEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF

Q02980 Ribulose bisphosphate carboxylase small subunit, chloroplastic6.1e-8177.05Show/hide
Query:  MASSIVSSAAVASV--NRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVP
        MASS++SS  VA+V  +R +PAQA MVAPFTGLKS +A P+TRK+NDIT++ASNGGRVQCM+VWPPLGLKKFETLSYLP L    LAKEV+YLLRK WVP
Subjt:  MASSIVSSAAVASV--NRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVP

Query:  CLEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF
        CLEF++  GFVYRENHRSPGYYDGRYWTMWKLPMFGCTD++QV++E+EEAKK YP +FIR+IGFDNVRQVQCISFI YKP  F
Subjt:  CLEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF

Arabidopsis top hitse value%identityAlignment
AT1G67090.1 ribulose bisphosphate carboxylase small chain 1A4.2e-7772.53Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC
        MASS++SSA +     ASPAQA+MVAPF GLKS AAFP TRK NNDIT++ SNGGRV CM+VWPP+G KKFETLSYLPDL  ++LAKEV+YL+R  W+PC
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC

Query:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF
        +EF++  GFVYRE+  SPGYYDGRYWTMWKLP+FGCTD+AQV++E+EE KK YP+AFIR+IGFDN RQVQCISFI YKPP F
Subjt:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF

AT5G38410.1 Ribulose bisphosphate carboxylase (small chain) family protein1.7e-7874.18Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC
        MASS++SSAAV +    SPAQA+MVAPFTGLKS AAFP+TRK N DIT++ASNGGRV CMKVWPP+G KKFETLSYLPDL   +LAKEV+YLLR  W+PC
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC

Query:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF
        +EF++  GFVYRE+  +PGYYDGRYWTMWKLP+FGCTD+AQV++E+EE KK YP AFIR+IGFDN RQVQCISFI YKPP F
Subjt:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF

AT5G38410.3 Ribulose bisphosphate carboxylase (small chain) family protein1.2e-7672.19Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC
        MASS++SSAAV +    SPAQA+MVAPFTGLKS AAFP+TRK N DIT++ASNGGRV CMKVWPP+G KKFETLSYLPDL   +LAKEV+YLLR  W+PC
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC

Query:  LEFDVH-----DGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF
        +EF++       GFVYRE+  +PGYYDGRYWTMWKLP+FGCTD+AQV++E+EE KK YP AFIR+IGFDN RQVQCISFI YKPP F
Subjt:  LEFDVH-----DGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF

AT5G38420.1 Ribulose bisphosphate carboxylase (small chain) family protein1.1e-7773.08Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC
        MASS+ SS AV +    SPAQA+MVAPFTGLKS A+FP+TRK NNDIT++ SNGGRV CMKVWPP+G KKFETLSYLPDL   +LAKEV+YLLR  W+PC
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC

Query:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF
        +EF++  GFVYRE+  +PGYYDGRYWTMWKLP+FGCTD+AQV++E+EE KK YP AFIR+IGFDN RQVQCISFI YKPP F
Subjt:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF

AT5G38430.1 Ribulose bisphosphate carboxylase (small chain) family protein2.9e-7873.63Show/hide
Query:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC
        MASS++SSAAV +    SPAQA+MVAPFTGLKS A+FP+TRK NNDIT++ SNGGRV CMKVWPP+G KKFETLSYLPDL   +LAKEV+YLLR  W+PC
Subjt:  MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRK-NNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPC

Query:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF
        +EF++  GFVYRE+  +PGYYDGRYWTMWKLP+FGCTD+AQV++E+EE KK YP AFIR+IGFDN RQVQCISFI YKPP F
Subjt:  LEFDVHDGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCATCGTCTCATCCGCGGCTGTTGCCTCTGTGAACAGGGCCTCCCCTGCTCAAGCTAGCATGGTAGCACCCTTCACTGGCCTGAAATCCGGCGCCGCCTT
CCCCATCACTCGCAAGAACAACGACATCACCACTCTGGCCAGCAATGGTGGAAGAGTTCAGTGCATGAAGGTGTGGCCACCACTTGGATTGAAGAAGTTCGAGACTCTGT
CTTACCTGCCTGATCTTGATCAAACCCAATTGGCGAAAGAAGTAGAGTACCTTCTCAGGAAGGGATGGGTTCCCTGCCTTGAATTCGACGTGCATGACGGATTCGTGTAC
CGTGAGAACCACAGGTCACCAGGATACTACGATGGACGCTACTGGACCATGTGGAAGTTGCCCATGTTTGGTTGCACCGATGCGGCTCAGGTGATTCAGGAGATTGAGGA
GGCCAAGAAGCACTACCCCGACGCATTCATCAGGGTTATTGGCTTTGACAACGTCCGTCAAGTCCAGTGCATCAGTTTCATTGTCTACAAGCCCCCTAAGTTCTACTCTA
GCTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAATGTCAGCCCCATTCCGTTGATAGAGATAAGGTAATGGGTTGTTGCCACGTGTCAAAAGGAAATGGTGTAGGAAGTGATAAGGTTTGAGATACCAACTATGTGAT
CATAAATCCAAGTTTTTTACCAACTAAAATTACGACCACTAAATGGGTTTGTGTATGGATAAAATAGGCAGTGTAAAGGCCTTATAAATACACCACCATTTCACAGTACA
AGGCCTCTCAGACCCAACAGCAAGAGCTTTCAAGCACTCTACTAGCTAGCTTCTAGTAAATCCCTCTAAACTCCCAAGGAAAAGAGGCATCAATGGCTTCCTCCATCGTC
TCATCCGCGGCTGTTGCCTCTGTGAACAGGGCCTCCCCTGCTCAAGCTAGCATGGTAGCACCCTTCACTGGCCTGAAATCCGGCGCCGCCTTCCCCATCACTCGCAAGAA
CAACGACATCACCACTCTGGCCAGCAATGGTGGAAGAGTTCAGTGCATGAAGGTGTGGCCACCACTTGGATTGAAGAAGTTCGAGACTCTGTCTTACCTGCCTGATCTTG
ATCAAACCCAATTGGCGAAAGAAGTAGAGTACCTTCTCAGGAAGGGATGGGTTCCCTGCCTTGAATTCGACGTGCATGACGGATTCGTGTACCGTGAGAACCACAGGTCA
CCAGGATACTACGATGGACGCTACTGGACCATGTGGAAGTTGCCCATGTTTGGTTGCACCGATGCGGCTCAGGTGATTCAGGAGATTGAGGAGGCCAAGAAGCACTACCC
CGACGCATTCATCAGGGTTATTGGCTTTGACAACGTCCGTCAAGTCCAGTGCATCAGTTTCATTGTCTACAAGCCCCCTAAGTTCTACTCTAGCTGATTCCATTCCCAGC
TTTCTTGAGGCGAATTTCCAGCATTTGCCTTTTTCCACCTCGCTTCCACATCACTTGGCTTTCAATCCAATTTCCCATTTTTTTTTTTTTTTTCCTTTTACGTTTTGATC
TGTGTACTTCAATCCCTATGTTTATTT
Protein sequenceShow/hide protein sequence
MASSIVSSAAVASVNRASPAQASMVAPFTGLKSGAAFPITRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLSYLPDLDQTQLAKEVEYLLRKGWVPCLEFDVHDGFVY
RENHRSPGYYDGRYWTMWKLPMFGCTDAAQVIQEIEEAKKHYPDAFIRVIGFDNVRQVQCISFIVYKPPKFYSS