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Clc05G25070 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G25070
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionethylene-responsive transcription factor ERF118-like
Genome locationClcChr05:32874764..32875428
RNA-Seq ExpressionClc05G25070
SyntenyClc05G25070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573970.1 hypothetical protein SDJN03_27857, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1558.51Show/hide
Query:  VIGALLKLWFSS----SLCCFWQRLIQVQQSYSMRLRLKRQVNFSSFFRFLLFSKGTCSGVKFSWAFRIKRFLLRFYTLHLSCCDSQRSSIVSI
        VI ALL+LWFSS    SLC FWQRLI VQQS+SM  R KR                TCSGVK SW  RIK+FLLRF TLH  C DS +SSIVS+
Subjt:  VIGALLKLWFSS----SLCCFWQRLIQVQQSYSMRLRLKRQVNFSSFFRFLLFSKGTCSGVKFSWAFRIKRFLLRFYTLHLSCCDSQRSSIVSI
XP_022968247.1 ethylene-responsive transcription factor ERF118-like [Cucurbita maxima]1.0e-1964.89Show/hide
Query:  VIGALLKLWFSS----SLCCFWQRLIQVQQSYSMRLRLKRQVNFSSFFRFLLFSKGTCSGVKFSWAFRIKRFLLRFYTLHLSCCDSQRSSIVSI
        VIGALL+LWFSS    SLCCFWQRLI VQQS+SM             FRF    K TCSGVKFSW FRIK+FLLRF TLH  C DSQ+SSIVS+
Subjt:  VIGALLKLWFSS----SLCCFWQRLIQVQQSYSMRLRLKRQVNFSSFFRFLLFSKGTCSGVKFSWAFRIKRFLLRFYTLHLSCCDSQRSSIVSI
TrEMBL top hitse value%identityAlignment
A0A314XMT5 Uncharacterized protein8.7e-0443.18Show/hide
Query:  VIGALLKLWFSSS-------------LCCFWQRLIQVQQSYSMRLRLKRQVNFSSFFRFLLFSKGTCSGVKFSWAFRIKRFLLRFYTL
        VIGALLKLW  +S             LCCFWQRL  V  S SM LR KR                TCSG+++  AF IKRF   F  L
Subjt:  VIGALLKLWFSSS-------------LCCFWQRLIQVQQSYSMRLRLKRQVNFSSFFRFLLFSKGTCSGVKFSWAFRIKRFLLRFYTL
A0A6J1HT39 ethylene-responsive transcription factor ERF118-like5.1e-2064.89Show/hide
Query:  VIGALLKLWFSS----SLCCFWQRLIQVQQSYSMRLRLKRQVNFSSFFRFLLFSKGTCSGVKFSWAFRIKRFLLRFYTLHLSCCDSQRSSIVSI
        VIGALL+LWFSS    SLCCFWQRLI VQQS+SM             FRF    K TCSGVKFSW FRIK+FLLRF TLH  C DSQ+SSIVS+
Subjt:  VIGALLKLWFSS----SLCCFWQRLIQVQQSYSMRLRLKRQVNFSSFFRFLLFSKGTCSGVKFSWAFRIKRFLLRFYTLHLSCCDSQRSSIVSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAACAGGGCTCAGAGTTTTCTCCATCTGGGTCTGTGCTTTTTTTTGGAACCGGGAAAGAACTTGAAGACGTGATTGGGGCTCTGTTGAAGCTCTGGTTTTCTTC
TTCTCTCTGCTGCTTCTGGCAGAGGTTGATTCAAGTGCAACAATCCTATTCAATGCGTTTGAGGTTAAAAAGGCAAGTCAATTTTTCTAGTTTCTTTCGTTTTCTTTTGT
TTTCTAAAGGGACTTGTTCTGGAGTAAAGTTCTCTTGGGCTTTTCGTATAAAACGATTTCTACTTCGTTTCTATACCTTACACTTGAGTTGTTGTGATTCTCAGAGATCT
TCCATTGTTTCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAACAGGGCTCAGAGTTTTCTCCATCTGGGTCTGTGCTTTTTTTTGGAACCGGGAAAGAACTTGAAGACGTGATTGGGGCTCTGTTGAAGCTCTGGTTTTCTTC
TTCTCTCTGCTGCTTCTGGCAGAGGTTGATTCAAGTGCAACAATCCTATTCAATGCGTTTGAGGTTAAAAAGGCAAGTCAATTTTTCTAGTTTCTTTCGTTTTCTTTTGT
TTTCTAAAGGGACTTGTTCTGGAGTAAAGTTCTCTTGGGCTTTTCGTATAAAACGATTTCTACTTCGTTTCTATACCTTACACTTGAGTTGTTGTGATTCTCAGAGATCT
TCCATTGTTTCCATTTGA
Protein sequenceShow/hide protein sequence
MGKQGSEFSPSGSVLFFGTGKELEDVIGALLKLWFSSSLCCFWQRLIQVQQSYSMRLRLKRQVNFSSFFRFLLFSKGTCSGVKFSWAFRIKRFLLRFYTLHLSCCDSQRS
SIVSI